Strain Fitness in Escherichia coli BW25113 around b3514

Experiment: Carbenicillin 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbenicillin 0.008 mg/ml
3,657,448	+	mdtE	b3513	0.17	+0.1
3,657,453	+	mdtE	b3513	0.17	+0.1
3,657,456	-	mdtE	b3513	0.17	-0.1
3,657,456	-	mdtE	b3513	0.17	-0.7
3,657,463	+	mdtE	b3513	0.18	-0.2
3,657,552	+	mdtE	b3513	0.26	+0.2
3,657,552	+	mdtE	b3513	0.26	-0.9
3,657,560	-	mdtE	b3513	0.26	-0.6
3,657,560	-	mdtE	b3513	0.26	+0.3
3,657,560	-	mdtE	b3513	0.26	-0.9
3,657,560	-	mdtE	b3513	0.26	-0.1
3,657,604	-	mdtE	b3513	0.30	+0.7
3,657,604	-	mdtE	b3513	0.30	+1.6
3,657,646	-	mdtE	b3513	0.34	+0.0
3,657,674	-	mdtE	b3513	0.36	+0.8
3,657,707	+	mdtE	b3513	0.39	-2.7
3,657,853	+	mdtE	b3513	0.52	-0.9
3,657,853	+	mdtE	b3513	0.52	-0.1
3,657,853	+	mdtE	b3513	0.52	+0.1
3,657,908	-	mdtE	b3513	0.56	+0.9
3,657,908	-	mdtE	b3513	0.56	+0.9
3,657,919	+	mdtE	b3513	0.57	+0.6
3,657,967	+	mdtE	b3513	0.61	+0.2
3,657,967	+	mdtE	b3513	0.61	+0.0
3,657,967	+	mdtE	b3513	0.61	-1.2
3,657,967	+	mdtE	b3513	0.61	-0.4
3,657,967	+	mdtE	b3513	0.61	+1.1
3,657,975	-	mdtE	b3513	0.62	+1.3
3,657,975	-	mdtE	b3513	0.62	+0.8
3,657,975	-	mdtE	b3513	0.62	-1.5
3,658,002	-	mdtE	b3513	0.65	-0.1
3,658,005	+	mdtE	b3513	0.65	+0.3
3,658,049	-	mdtE	b3513	0.69	+0.7
3,658,049	-	mdtE	b3513	0.69	+1.0
3,658,110	+	mdtE	b3513	0.74	-0.2
3,658,129	-	mdtE	b3513	0.75	+0.1
3,658,129	-	mdtE	b3513	0.75	-2.3
3,658,131	-	mdtE	b3513	0.76	-1.3
3,658,133	-	mdtE	b3513	0.76	+1.5
3,658,133	-	mdtE	b3513	0.76	-0.1
3,658,191	+	mdtE	b3513	0.81	-0.5
3,658,191	+	mdtE	b3513	0.81	-0.4
3,658,209	-	mdtE	b3513	0.82	-0.5
3,658,259	+	mdtE	b3513	0.87	+1.6
3,658,284	+	mdtE	b3513	0.89	-0.6
3,658,417	+				-0.9
3,658,420	+				-1.6
3,658,423	-				-0.5
3,658,428	-				+0.0
3,658,428	-				-0.7
3,658,515	+				+0.1
3,658,578	+				-1.1
3,658,578	+				-1.7
3,658,609	-				+0.5
3,658,623	-				-0.4
3,658,623	-				+0.4
3,658,639	+				-0.3
3,658,639	+				+0.7
3,658,645	-				+0.4
3,658,656	+				+1.1
3,658,656	+				+0.1
3,658,670	-				+0.1
3,658,692	+				+0.3
3,658,692	+				+0.1
3,658,791	-	mdtF	b3514	0.11	+0.9
3,658,800	+	mdtF	b3514	0.12	-1.1
3,658,829	+	mdtF	b3514	0.13	+0.7
3,658,837	+	mdtF	b3514	0.13	-0.5
3,658,887	-	mdtF	b3514	0.14	+0.0
3,658,889	+	mdtF	b3514	0.15	-1.7
3,658,904	+	mdtF	b3514	0.15	-0.6
3,658,904	+	mdtF	b3514	0.15	-0.3
3,658,904	-	mdtF	b3514	0.15	+1.4
3,658,904	-	mdtF	b3514	0.15	+0.2
3,658,906	+	mdtF	b3514	0.15	-1.1
3,658,929	+	mdtF	b3514	0.16	-0.0
3,658,929	+	mdtF	b3514	0.16	+0.5
3,658,934	+	mdtF	b3514	0.16	-0.0
3,658,991	+	mdtF	b3514	0.18	-1.5
3,659,034	-	mdtF	b3514	0.19	+0.4
3,659,096	-	mdtF	b3514	0.21	-1.2
3,659,105	+	mdtF	b3514	0.21	-0.9
3,659,105	+	mdtF	b3514	0.21	+1.1
3,659,148	-	mdtF	b3514	0.23	+0.3
3,659,148	-	mdtF	b3514	0.23	-0.2
3,659,237	+	mdtF	b3514	0.26	+0.5
3,659,237	+	mdtF	b3514	0.26	+1.0
3,659,237	+	mdtF	b3514	0.26	+0.4
3,659,274	+	mdtF	b3514	0.27	-0.8
3,659,274	+	mdtF	b3514	0.27	-0.9
3,659,274	+	mdtF	b3514	0.27	-0.6
3,659,313	-	mdtF	b3514	0.28	+0.7
3,659,313	-	mdtF	b3514	0.28	-1.2
3,659,350	-	mdtF	b3514	0.29	+0.1
3,659,350	-	mdtF	b3514	0.29	+0.5
3,659,360	-	mdtF	b3514	0.30	+0.8
3,659,364	-	mdtF	b3514	0.30	+0.0
3,659,471	-	mdtF	b3514	0.33	+0.3
3,659,639	-	mdtF	b3514	0.39	-2.1
3,659,644	+	mdtF	b3514	0.39	+0.1
3,659,644	+	mdtF	b3514	0.39	+0.4
3,659,657	-	mdtF	b3514	0.39	-0.8
3,659,662	+	mdtF	b3514	0.39	+0.5
3,659,675	+	mdtF	b3514	0.40	+2.0
3,659,755	-	mdtF	b3514	0.42	-0.2
3,659,826	-	mdtF	b3514	0.45	+1.0
3,659,902	+	mdtF	b3514	0.47	+3.4
3,659,902	+	mdtF	b3514	0.47	+0.8
3,659,910	-	mdtF	b3514	0.47	+0.5
3,659,915	-	mdtF	b3514	0.47	-0.0
3,659,922	+	mdtF	b3514	0.48	-0.0
3,660,005	+	mdtF	b3514	0.50	+0.9
3,660,013	-	mdtF	b3514	0.51	+0.1
3,660,013	-	mdtF	b3514	0.51	-0.7
3,660,016	-	mdtF	b3514	0.51	+0.4
3,660,016	-	mdtF	b3514	0.51	+0.2
3,660,033	-	mdtF	b3514	0.51	-0.1
3,660,035	+	mdtF	b3514	0.51	-0.1
3,660,043	-	mdtF	b3514	0.52	+0.8
3,660,046	+	mdtF	b3514	0.52	+0.6
3,660,058	-	mdtF	b3514	0.52	+0.6
3,660,126	+	mdtF	b3514	0.54	+0.8
3,660,131	+	mdtF	b3514	0.54	+1.0
3,660,167	-	mdtF	b3514	0.56	+2.3
3,660,167	-	mdtF	b3514	0.56	+0.6
3,660,179	-	mdtF	b3514	0.56	-0.4
3,660,252	-	mdtF	b3514	0.58	+0.5
3,660,252	-	mdtF	b3514	0.58	+1.1
3,660,265	-	mdtF	b3514	0.59	-1.5
3,660,265	-	mdtF	b3514	0.59	+1.0
3,660,303	+	mdtF	b3514	0.60	+0.6
3,660,311	+	mdtF	b3514	0.60	+0.8
3,660,311	+	mdtF	b3514	0.60	+0.8
3,660,319	+	mdtF	b3514	0.60	+0.8
3,660,319	+	mdtF	b3514	0.60	+0.1
3,660,319	+	mdtF	b3514	0.60	-1.6
3,660,321	+	mdtF	b3514	0.61	+0.5
3,660,327	-	mdtF	b3514	0.61	+0.3
3,660,332	+	mdtF	b3514	0.61	+0.3
3,660,415	+	mdtF	b3514	0.64	+0.0
3,660,415	+	mdtF	b3514	0.64	+0.9
3,660,454	+	mdtF	b3514	0.65	-0.0
3,660,491	+	mdtF	b3514	0.66	+3.4
3,660,491	+	mdtF	b3514	0.66	+0.1
3,660,497	+	mdtF	b3514	0.66	+0.1
3,660,498	-	mdtF	b3514	0.66	+0.3
3,660,659	+	mdtF	b3514	0.71	-0.3
3,660,659	+	mdtF	b3514	0.71	+0.3
3,660,784	+	mdtF	b3514	0.75	+1.1
3,660,784	+	mdtF	b3514	0.75	+0.7
3,660,799	-	mdtF	b3514	0.76	+0.2
3,660,802	-	mdtF	b3514	0.76	-0.2
3,660,804	-	mdtF	b3514	0.76	+0.1
3,660,824	-	mdtF	b3514	0.77	+0.5
3,660,884	+	mdtF	b3514	0.79	+0.2
3,660,964	-	mdtF	b3514	0.81	-0.2
3,660,979	-	mdtF	b3514	0.82	+0.4
3,660,979	-	mdtF	b3514	0.82	-0.3
3,661,011	+	mdtF	b3514	0.83	+0.2
3,661,024	+	mdtF	b3514	0.83	-0.1
3,661,041	+	mdtF	b3514	0.84	+0.0
3,661,049	-	mdtF	b3514	0.84	-1.5
3,661,101	+	mdtF	b3514	0.86	+1.1
3,661,101	+	mdtF	b3514	0.86	+0.4
3,661,103	+	mdtF	b3514	0.86	-0.1
3,661,109	-	mdtF	b3514	0.86	+2.0
3,661,109	-	mdtF	b3514	0.86	-0.8
3,661,109	-	mdtF	b3514	0.86	+0.2
3,661,109	-	mdtF	b3514	0.86	-0.5
3,661,117	-	mdtF	b3514	0.86	-2.1
3,661,162	+	mdtF	b3514	0.88	-0.5
3,661,182	-	mdtF	b3514	0.88	+1.1
3,661,373	-				+0.0
3,661,426	+				-0.7
3,661,426	+				+0.8
3,661,446	+				-0.4
3,661,565	-				-0.3
3,661,565	-				+1.6
3,661,567	+				-1.1
3,661,567	+				+0.1
3,661,570	-				+0.5
3,661,634	+				-0.4
3,661,634	+				-0.6
3,661,650	+				+0.3
3,661,716	-				-0.5
3,661,716	-				-1.3
3,661,750	+				-0.9
3,661,866	-				+6.2
3,661,870	+				+0.4
3,661,929	+				-0.3
3,661,929	+				-0.4
3,661,934	+				+0.1
3,661,937	-				+6.0
3,661,938	+				-0.5
3,661,960	+				-0.1
3,661,996	+	gadW	b3515	0.11	-1.4
3,661,998	-	gadW	b3515	0.12	+2.5
3,661,998	-	gadW	b3515	0.12	+4.8
3,662,001	-	gadW	b3515	0.12	+2.8
3,662,006	-	gadW	b3515	0.13	+5.8
3,662,006	-	gadW	b3515	0.13	+5.6
3,662,006	-	gadW	b3515	0.13	+3.9
3,662,009	-	gadW	b3515	0.13	+4.9
3,662,009	-	gadW	b3515	0.13	+3.7
3,662,011	-	gadW	b3515	0.13	+1.6
3,662,011	-	gadW	b3515	0.13	+1.1
3,662,025	+	gadW	b3515	0.15	-0.9
3,662,030	-	gadW	b3515	0.16	+4.2
3,662,030	-	gadW	b3515	0.16	+6.5
3,662,033	-	gadW	b3515	0.16	+6.5
3,662,035	-	gadW	b3515	0.17	+6.4
3,662,038	-	gadW	b3515	0.17	+6.2
3,662,067	+	gadW	b3515	0.21	+0.4
3,662,070	-	gadW	b3515	0.22	+2.7
3,662,070	-	gadW	b3515	0.22	+1.4
3,662,077	+	gadW	b3515	0.22	+1.5
3,662,077	+	gadW	b3515	0.22	-0.1
3,662,111	+	gadW	b3515	0.27	+0.6
3,662,115	+	gadW	b3515	0.28	-0.4
3,662,115	+	gadW	b3515	0.28	+0.0
3,662,125	+	gadW	b3515	0.29	+0.2
3,662,149	-	gadW	b3515	0.32	+4.6
3,662,154	-	gadW	b3515	0.33	+4.0
3,662,154	-	gadW	b3515	0.33	+3.0
3,662,154	-	gadW	b3515	0.33	+3.4
3,662,154	-	gadW	b3515	0.33	+3.9
3,662,158	-	gadW	b3515	0.34	+2.8
3,662,158	-	gadW	b3515	0.34	+3.1
3,662,169	+	gadW	b3515	0.35	+1.6
3,662,171	+	gadW	b3515	0.35	-1.2
3,662,171	+	gadW	b3515	0.35	+0.1
3,662,187	-	gadW	b3515	0.38	+5.7
3,662,197	+	gadW	b3515	0.39	-1.1
3,662,205	+	gadW	b3515	0.40	-0.1
3,662,213	-	gadW	b3515	0.41	+3.8
3,662,235	+	gadW	b3515	0.44	-0.7
3,662,243	-	gadW	b3515	0.45	+3.7
3,662,243	-	gadW	b3515	0.45	+3.1
3,662,243	-	gadW	b3515	0.45	+2.6
3,662,297	-	gadW	b3515	0.53	+1.0
3,662,307	+	gadW	b3515	0.54	+0.0
3,662,308	+	gadW	b3515	0.54	-0.9
3,662,308	+	gadW	b3515	0.54	-0.5
3,662,310	+	gadW	b3515	0.54	-0.4
3,662,311	-	gadW	b3515	0.55	-0.2
3,662,318	+	gadW	b3515	0.56	+0.0
3,662,323	-	gadW	b3515	0.56	+0.0
3,662,330	+	gadW	b3515	0.57	-0.7
3,662,330	+	gadW	b3515	0.57	-0.3
3,662,332	-	gadW	b3515	0.57	-0.9
3,662,332	-	gadW	b3515	0.57	+1.1
3,662,370	+	gadW	b3515	0.63	+0.6
3,662,371	+	gadW	b3515	0.63	-0.8
3,662,371	+	gadW	b3515	0.63	-0.5
3,662,382	+	gadW	b3515	0.64	+0.3
3,662,382	+	gadW	b3515	0.64	-0.5
3,662,390	-	gadW	b3515	0.65	+1.5
3,662,390	-	gadW	b3515	0.65	-0.2
3,662,390	-	gadW	b3515	0.65	+0.9
3,662,390	-	gadW	b3515	0.65	+2.3
3,662,390	-	gadW	b3515	0.65	-0.2
3,662,390	-	gadW	b3515	0.65	+0.2
3,662,390	-	gadW	b3515	0.65	+4.7
3,662,390	-	gadW	b3515	0.65	+1.1
3,662,408	+	gadW	b3515	0.68	-0.2
3,662,408	+	gadW	b3515	0.68	+0.9
3,662,408	+	gadW	b3515	0.68	+1.4
3,662,410	-	gadW	b3515	0.68	-0.4
3,662,410	-	gadW	b3515	0.68	-1.5
3,662,422	+	gadW	b3515	0.70	+0.3
3,662,430	-	gadW	b3515	0.71	+1.1
3,662,462	+	gadW	b3515	0.75	-0.3
3,662,462	+	gadW	b3515	0.75	-0.9
3,662,479	-	gadW	b3515	0.78	+0.3
3,662,484	+	gadW	b3515	0.78	+0.5
3,662,484	+	gadW	b3515	0.78	+2.7
3,662,486	+	gadW	b3515	0.79	-0.4
3,662,489	-	gadW	b3515	0.79	-1.2
3,662,489	-	gadW	b3515	0.79	+0.4
3,662,491	+	gadW	b3515	0.79	-2.0
3,662,494	-	gadW	b3515	0.80	-0.9
3,662,500	+	gadW	b3515	0.81	-0.2
3,662,503	-	gadW	b3515	0.81	+0.3
3,662,503	-	gadW	b3515	0.81	+2.3
3,662,508	+	gadW	b3515	0.82	-0.5
3,662,508	-	gadW	b3515	0.82	+0.1
3,662,510	+	gadW	b3515	0.82	+0.4
3,662,510	+	gadW	b3515	0.82	+1.1
3,662,548	+	gadW	b3515	0.87	-0.6