Strain Fitness in Escherichia coli BW25113 around b3266

Experiment: Carbenicillin 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbenicillin 0.008 mg/ml
3,412,056	-	acrE	b3265	0.15	-0.5
3,412,065	+	acrE	b3265	0.15	+0.5
3,412,065	+	acrE	b3265	0.15	+0.5
3,412,067	-	acrE	b3265	0.16	+0.4
3,412,067	-	acrE	b3265	0.16	+0.1
3,412,067	-	acrE	b3265	0.16	-0.0
3,412,067	-	acrE	b3265	0.16	+0.6
3,412,079	-	acrE	b3265	0.17	-1.0
3,412,079	-	acrE	b3265	0.17	-1.3
3,412,081	-	acrE	b3265	0.17	+0.9
3,412,103	-	acrE	b3265	0.19	+0.2
3,412,111	-	acrE	b3265	0.19	-0.8
3,412,147	-	acrE	b3265	0.23	-0.8
3,412,150	+	acrE	b3265	0.23	-1.5
3,412,161	+	acrE	b3265	0.24	+0.6
3,412,161	+	acrE	b3265	0.24	+1.8
3,412,169	-	acrE	b3265	0.24	-1.3
3,412,169	-	acrE	b3265	0.24	+0.4
3,412,169	-	acrE	b3265	0.24	-0.1
3,412,282	+	acrE	b3265	0.34	+0.0
3,412,288	+	acrE	b3265	0.35	-0.2
3,412,288	+	acrE	b3265	0.35	-1.0
3,412,305	+	acrE	b3265	0.36	-0.1
3,412,314	-	acrE	b3265	0.37	-1.1
3,412,333	+	acrE	b3265	0.39	-0.5
3,412,528	-	acrE	b3265	0.55	-1.2
3,412,605	+	acrE	b3265	0.62	+0.3
3,412,700	+	acrE	b3265	0.70	-0.5
3,412,717	+	acrE	b3265	0.72	+0.0
3,412,717	+	acrE	b3265	0.72	+0.8
3,412,755	+	acrE	b3265	0.75	+0.0
3,412,770	+	acrE	b3265	0.76	-0.5
3,412,770	+	acrE	b3265	0.76	+0.5
3,412,778	-	acrE	b3265	0.77	+0.3
3,412,789	+	acrE	b3265	0.78	-0.3
3,412,789	+	acrE	b3265	0.78	-1.7
3,412,824	-	acrE	b3265	0.81	+0.7
3,412,831	-	acrE	b3265	0.82	+0.3
3,412,831	-	acrE	b3265	0.82	+2.0
3,413,006	-				+0.3
3,413,006	-				+0.7
3,413,011	+				-2.2
3,413,022	+				+0.0
3,413,027	+				-0.1
3,413,159	-				+0.2
3,413,164	-				+0.7
3,413,228	+				+1.9
3,413,236	-				+1.0
3,413,236	-				+0.8
3,413,277	+				+0.0
3,413,279	+				+0.5
3,413,280	+				-0.6
3,413,282	+				-0.2
3,413,339	+				-0.7
3,413,339	+				-0.8
3,413,347	-				+0.1
3,413,347	-				-0.0
3,413,374	-	acrF	b3266	0.10	+0.0
3,413,381	-	acrF	b3266	0.10	+0.3
3,413,401	-	acrF	b3266	0.11	+0.0
3,413,401	-	acrF	b3266	0.11	+0.0
3,413,437	-	acrF	b3266	0.12	-0.4
3,413,485	+	acrF	b3266	0.14	-0.3
3,413,492	+	acrF	b3266	0.14	+0.3
3,413,497	+	acrF	b3266	0.14	-0.9
3,413,524	+	acrF	b3266	0.15	+0.0
3,413,597	+	acrF	b3266	0.17	+1.3
3,413,597	+	acrF	b3266	0.17	+1.4
3,413,597	+	acrF	b3266	0.17	-0.1
3,413,687	-	acrF	b3266	0.20	-0.3
3,413,687	-	acrF	b3266	0.20	-0.2
3,413,731	-	acrF	b3266	0.22	+1.3
3,413,769	+	acrF	b3266	0.23	-0.1
3,413,844	-	acrF	b3266	0.25	+0.4
3,414,006	+	acrF	b3266	0.31	-0.0
3,414,046	+	acrF	b3266	0.32	+2.3
3,414,102	-	acrF	b3266	0.34	+0.6
3,414,127	-	acrF	b3266	0.35	+0.2
3,414,127	-	acrF	b3266	0.35	-0.1
3,414,155	-	acrF	b3266	0.35	-0.0
3,414,155	-	acrF	b3266	0.35	+1.7
3,414,229	+	acrF	b3266	0.38	-0.5
3,414,280	+	acrF	b3266	0.39	+0.5
3,414,280	+	acrF	b3266	0.39	+1.0
3,414,312	+	acrF	b3266	0.40	+1.0
3,414,312	+	acrF	b3266	0.40	+0.6
3,414,328	-	acrF	b3266	0.41	-0.3
3,414,380	+	acrF	b3266	0.43	+1.8
3,414,396	+	acrF	b3266	0.43	+0.1
3,414,444	-	acrF	b3266	0.45	-0.4
3,414,535	-	acrF	b3266	0.48	-0.5
3,414,535	-	acrF	b3266	0.48	+0.2
3,414,542	+	acrF	b3266	0.48	+0.6
3,414,542	+	acrF	b3266	0.48	-0.4
3,414,607	+	acrF	b3266	0.50	-0.5
3,414,619	+	acrF	b3266	0.50	-0.3
3,414,619	-	acrF	b3266	0.50	+1.8
3,414,626	+	acrF	b3266	0.51	+0.5
3,414,640	-	acrF	b3266	0.51	+1.0
3,414,690	-	acrF	b3266	0.53	+0.1
3,414,690	-	acrF	b3266	0.53	+2.0
3,414,750	-	acrF	b3266	0.55	+0.0
3,414,760	-	acrF	b3266	0.55	-0.5
3,414,765	+	acrF	b3266	0.55	+0.0
3,414,884	-	acrF	b3266	0.59	+0.8
3,414,892	+	acrF	b3266	0.59	+0.7
3,414,924	+	acrF	b3266	0.60	-0.1
3,414,930	+	acrF	b3266	0.60	+1.6
3,414,930	+	acrF	b3266	0.60	-1.0
3,414,947	+	acrF	b3266	0.61	-0.8
3,415,071	-	acrF	b3266	0.65	+1.0
3,415,081	-	acrF	b3266	0.65	+0.0
3,415,094	-	acrF	b3266	0.66	+0.8
3,415,134	-	acrF	b3266	0.67	+0.8
3,415,134	-	acrF	b3266	0.67	+0.5
3,415,155	+	acrF	b3266	0.68	-0.2
3,415,165	-	acrF	b3266	0.68	+1.0
3,415,189	+	acrF	b3266	0.69	-0.5
3,415,222	-	acrF	b3266	0.70	-0.2
3,415,229	+	acrF	b3266	0.70	-0.6
3,415,262	+	acrF	b3266	0.71	-0.8
3,415,313	+	acrF	b3266	0.73	+0.5
3,415,313	+	acrF	b3266	0.73	+1.6
3,415,328	-	acrF	b3266	0.73	-0.2
3,415,341	+	acrF	b3266	0.74	-0.3
3,415,416	+	acrF	b3266	0.76	+0.5
3,415,416	+	acrF	b3266	0.76	-2.5
3,415,468	-	acrF	b3266	0.78	+0.8
3,415,489	-	acrF	b3266	0.78	+0.3
3,415,502	+	acrF	b3266	0.79	+0.2
3,415,503	+	acrF	b3266	0.79	+0.5
3,415,505	+	acrF	b3266	0.79	+0.0
3,415,617	+	acrF	b3266	0.83	+0.8
3,415,617	+	acrF	b3266	0.83	+0.7
3,415,617	+	acrF	b3266	0.83	+0.4
3,415,630	-	acrF	b3266	0.83	-0.2
3,415,632	+	acrF	b3266	0.83	+0.8
3,415,724	+	acrF	b3266	0.86	+0.6
3,415,733	-	acrF	b3266	0.86	+0.2
3,415,828	+	acrF	b3266	0.89	+0.2
3,415,844	+	acrF	b3266	0.90	-1.3
3,415,851	+				-0.1
3,415,851	+				+0.8
3,415,881	-				+0.7
3,415,924	-				+0.2
3,415,953	+				+1.2
3,415,953	+				-1.0
3,415,976	-				+0.1
3,416,005	+				+1.0
3,416,026	+				+0.8
3,416,026	+				+2.3
3,416,030	-				+1.0
3,416,030	-				-0.1
3,416,038	+				-0.3
3,416,053	+				-0.3
3,416,055	+				-0.4
3,416,055	+				+1.8
3,416,056	-				+0.2
3,416,077	+				-0.3
3,416,089	+				+1.0
3,416,089	+				+1.0
3,416,089	+				-0.2
3,416,096	+				+0.1
3,416,106	+				+2.0
3,416,118	+				+0.7
3,416,125	+				+0.0
3,416,128	-				-0.5
3,416,159	+				-2.8
3,416,159	+				+0.7
3,416,159	+				-0.5
3,416,358	+				+0.4
3,416,358	+				+0.7
3,416,362	+				+0.4
3,416,366	-				+1.5
3,416,410	-				+0.1
3,416,446	-	yhdV	b3267	0.15	-0.3
3,416,456	-	yhdV	b3267	0.20	+0.1
3,416,461	+	yhdV	b3267	0.22	+1.0
3,416,468	+	yhdV	b3267	0.25	-1.0
3,416,468	+	yhdV	b3267	0.25	+0.6
3,416,479	+	yhdV	b3267	0.30	+0.0
3,416,481	+	yhdV	b3267	0.31	+0.7
3,416,482	-	yhdV	b3267	0.32	-0.1
3,416,482	-	yhdV	b3267	0.32	-0.2
3,416,486	+	yhdV	b3267	0.33	-0.2
3,416,487	-	yhdV	b3267	0.34	+0.4
3,416,487	-	yhdV	b3267	0.34	-1.4
3,416,487	-	yhdV	b3267	0.34	+0.3
3,416,494	-	yhdV	b3267	0.37	-0.3
3,416,497	-	yhdV	b3267	0.38	-0.1
3,416,501	+	yhdV	b3267	0.40	+0.8
3,416,501	+	yhdV	b3267	0.40	+1.5
3,416,506	+	yhdV	b3267	0.42	+0.7
3,416,511	+	yhdV	b3267	0.45	+0.6
3,416,511	+	yhdV	b3267	0.45	-0.3
3,416,513	-	yhdV	b3267	0.45	+1.4
3,416,513	-	yhdV	b3267	0.45	+0.7
3,416,516	+	yhdV	b3267	0.47	-0.4
3,416,516	+	yhdV	b3267	0.47	-0.1
3,416,517	+	yhdV	b3267	0.47	+0.5
3,416,517	+	yhdV	b3267	0.47	+0.2
3,416,518	+	yhdV	b3267	0.48	+0.3
3,416,518	-	yhdV	b3267	0.48	-0.5
3,416,524	+	yhdV	b3267	0.50	+0.0
3,416,524	-	yhdV	b3267	0.50	-0.6
3,416,524	-	yhdV	b3267	0.50	-0.4
3,416,527	+	yhdV	b3267	0.52	+1.0
3,416,527	+	yhdV	b3267	0.52	-0.5
3,416,544	+	yhdV	b3267	0.59	+0.0
3,416,546	+	yhdV	b3267	0.60	-1.7
3,416,549	-	yhdV	b3267	0.62	+1.0
3,416,592	+	yhdV	b3267	0.81	+1.8
3,416,598	+	yhdV	b3267	0.84	+0.4
3,416,603	+	yhdV	b3267	0.86	+0.5
3,416,622	+				+0.4
3,416,624	+				+0.3
3,416,631	+				+0.0
3,416,631	+				+1.0
3,416,639	-				-2.3
3,416,641	+				+0.3
3,416,660	+				-1.3
3,416,660	+				-0.1
3,416,660	+				+2.0
3,416,665	+				+0.5
3,416,670	+				+1.4
3,416,670	+				+1.7
3,416,670	+				+0.6
3,416,670	+				+1.0
3,416,670	+				-0.8
3,416,673	+				-0.7
3,416,673	+				+0.4
3,416,673	+				-0.8
3,416,673	+				+0.6
3,416,675	+				+0.5
3,416,675	+				-0.5
3,416,703	+				+0.0
3,416,703	+				+0.6
3,416,728	+				+0.5
3,416,904	-				-0.5
3,416,904	-				+0.0
3,416,932	-				-0.5
3,416,944	-				+0.6
3,416,973	-				-1.0
3,416,975	+				+1.5
3,416,983	-				-1.0
3,416,983	-				+0.6
3,416,983	-				+1.0
3,416,996	+				+2.4
3,416,996	+				+0.8
3,417,014	-				+0.2
3,417,014	-				+0.5
3,417,014	-				+0.9
3,417,014	-				+0.8
3,417,014	-				-0.4
3,417,014	-				+0.7
3,417,060	-				+0.7
3,417,060	-				+1.6
3,417,060	-				-0.2
3,417,088	-				+0.0
3,417,130	+				+0.4