Strain Fitness in Escherichia coli BW25113 around b3131

Experiment: Carbenicillin 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbenicillin 0.008 mg/ml
3,275,046	+				+0.3
3,275,046	+				+1.5
3,275,049	-				+0.6
3,275,049	-				-0.1
3,275,049	-				+0.1
3,275,051	+				+1.2
3,275,051	+				+1.4
3,275,057	-				+0.8
3,275,059	-	sohA	b3129	0.10	+0.5
3,275,063	+	sohA	b3129	0.12	+1.6
3,275,098	+	sohA	b3129	0.22	+0.8
3,275,108	+	sohA	b3129	0.25	+1.2
3,275,108	+	sohA	b3129	0.25	+0.7
3,275,118	+	sohA	b3129	0.28	+0.4
3,275,118	+	sohA	b3129	0.28	+1.4
3,275,318	-	sohA	b3129	0.88	+0.0
3,275,318	-	sohA	b3129	0.88	+2.0
3,275,392	+				+0.7
3,275,392	+				+1.0
3,275,392	+				-0.6
3,275,400	-				+0.7
3,275,400	-				-0.6
3,275,420	-	yhaV	b3130	0.13	+0.6
3,275,427	+	yhaV	b3130	0.15	+0.7
3,275,451	+	yhaV	b3130	0.20	+0.1
3,275,512	+	yhaV	b3130	0.33	-1.2
3,275,536	+	yhaV	b3130	0.38	-0.8
3,275,596	+	yhaV	b3130	0.51	-0.1
3,275,642	-	yhaV	b3130	0.61	+0.6
3,275,642	-	yhaV	b3130	0.61	-0.2
3,275,678	+	yhaV	b3130	0.69	-0.2
3,275,685	-	yhaV	b3130	0.70	-0.3
3,275,685	-	yhaV	b3130	0.70	-0.2
3,275,686	-	yhaV	b3130	0.70	+0.0
3,275,686	-	yhaV	b3130	0.70	+1.0
3,275,690	-	yhaV	b3130	0.71	+0.3
3,275,735	+	yhaV	b3130	0.81	+0.4
3,275,741	-	yhaV	b3130	0.82	-0.5
3,275,781	-				+0.3
3,275,781	-				+0.0
3,276,109	+	agaR	b3131	0.29	-0.6
3,276,131	-	agaR	b3131	0.31	-0.7
3,276,131	-	agaR	b3131	0.31	-0.8
3,276,131	-	agaR	b3131	0.31	-1.0
3,276,170	+	agaR	b3131	0.36	-1.7
3,276,242	-	agaR	b3131	0.45	-0.9
3,276,242	-				+1.0
3,276,270	+	agaR	b3131	0.48	+0.4
3,276,447	-	agaR	b3131	0.70	-2.1
3,276,447	-	agaR	b3131	0.70	-1.3
3,276,560	-	agaR	b3131	0.84	-1.6
3,276,602	-	agaR	b3131	0.89	-3.1
3,276,625	-				-1.4
3,276,635	-				-0.7
3,276,643	+				+0.1
3,276,762	-				+0.8
3,276,790	-				+0.8
3,277,028	-				+0.8
3,277,120	-	kbaZ	b3132	0.14	+1.2
3,277,220	-	kbaZ	b3132	0.22	-0.1
3,277,261	-	kbaZ	b3132	0.25	-0.2
3,277,338	-	kbaZ	b3132	0.31	+1.3
3,277,338	-	kbaZ	b3132	0.31	-0.4
3,277,393	+	kbaZ	b3132	0.36	-0.3
3,277,393	+	kbaZ	b3132	0.36	+0.0
3,277,419	+	kbaZ	b3132	0.38	+1.0
3,277,443	-	kbaZ	b3132	0.40	+0.0
3,277,443	-	kbaZ	b3132	0.40	+0.6
3,277,477	+	kbaZ	b3132	0.42	+1.1
3,277,602	-	kbaZ	b3132	0.52	+0.4
3,277,603	+	kbaZ	b3132	0.52	+1.0
3,277,603	+	kbaZ	b3132	0.52	+0.0
3,277,647	+	kbaZ	b3132	0.56	+1.0
3,277,647	+	kbaZ	b3132	0.56	+0.7