Strain Fitness in Escherichia coli BW25113 around b1760
Experiment: Carbenicillin 0.008 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | Carbenicillin 0.008 mg/ml |
|---|---|---|---|---|---|
| remove | |||||
| 1,839,201 | + | b1758 | b1758 | 0.63 | -0.5 |
| 1,839,552 | - | +1.7 | |||
| 1,839,552 | - | -1.5 | |||
| 1,839,760 | - | nudG | b1759 | 0.60 | +1.9 |
| 1,839,893 | - | +1.4 | |||
| 1,840,011 | + | ynjH | b1760 | 0.45 | -0.7 |
| 1,840,026 | - | ynjH | b1760 | 0.51 | -1.7 |
| 1,840,029 | - | ynjH | b1760 | 0.52 | -1.4 |
| 1,840,031 | - | ynjH | b1760 | 0.53 | +0.1 |
| 1,840,258 | - | +0.2 | |||
| 1,840,325 | - | +0.5 | |||
| 1,840,430 | - | -0.1 | |||
| 1,840,876 | - | gdhA | b1761 | 0.36 | -0.2 |
| 1,840,886 | + | gdhA | b1761 | 0.37 | +0.5 |
| 1,840,886 | + | gdhA | b1761 | 0.37 | +2.5 |
| 1,840,971 | + | gdhA | b1761 | 0.43 | -0.1 |
| 1,840,971 | + | gdhA | b1761 | 0.43 | -0.1 |
| 1,841,012 | - | gdhA | b1761 | 0.46 | -0.8 |
| 1,841,111 | + | gdhA | b1761 | 0.53 | -0.2 |
Or see this region's nucleotide sequence