Strain Fitness in Escherichia coli BW25113 around b1468
Experiment: Carbenicillin 0.008 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Carbenicillin 0.008 mg/ml |
---|---|---|---|---|---|
remove | |||||
1,535,885 | + | narY | b1467 | 0.36 | -0.3 |
1,536,005 | - | narY | b1467 | 0.43 | -0.5 |
1,536,005 | - | narY | b1467 | 0.43 | -0.4 |
1,536,015 | - | narY | b1467 | 0.44 | -0.7 |
1,536,054 | + | narY | b1467 | 0.47 | +0.4 |
1,536,316 | - | narY | b1467 | 0.64 | +0.8 |
1,536,316 | - | narY | b1467 | 0.64 | +0.0 |
1,536,323 | + | narY | b1467 | 0.64 | -1.3 |
1,536,895 | - | +0.0 | |||
1,537,060 | - | +0.5 | |||
1,537,542 | - | narZ | b1468 | 0.18 | -0.5 |
1,537,763 | - | narZ | b1468 | 0.24 | -0.2 |
1,537,763 | - | narZ | b1468 | 0.24 | +0.4 |
1,537,800 | - | narZ | b1468 | 0.25 | +0.8 |
1,537,939 | + | narZ | b1468 | 0.28 | -0.0 |
1,537,939 | + | narZ | b1468 | 0.28 | -1.5 |
1,538,008 | - | narZ | b1468 | 0.30 | -1.5 |
1,538,036 | - | narZ | b1468 | 0.31 | +0.0 |
1,538,036 | - | narZ | b1468 | 0.31 | +0.4 |
1,538,102 | + | narZ | b1468 | 0.33 | -0.8 |
1,538,262 | - | narZ | b1468 | 0.37 | +1.0 |
1,538,954 | - | narZ | b1468 | 0.56 | -0.2 |
1,539,103 | - | narZ | b1468 | 0.60 | -0.6 |
1,539,113 | + | narZ | b1468 | 0.60 | +0.1 |
1,539,481 | - | narZ | b1468 | 0.70 | +0.8 |
1,539,813 | + | narZ | b1468 | 0.79 | +0.6 |
1,539,875 | + | narZ | b1468 | 0.80 | +0.1 |
1,539,875 | + | narZ | b1468 | 0.80 | -0.1 |
1,539,884 | - | narZ | b1468 | 0.80 | -0.5 |
1,540,463 | - | +1.8 | |||
1,540,622 | + | +1.8 | |||
1,540,622 | + | +1.2 | |||
1,540,720 | + | +0.2 | |||
1,540,790 | + | +0.5 | |||
1,540,922 | + | narU | b1469 | 0.16 | -0.9 |
1,540,922 | + | narU | b1469 | 0.16 | +0.4 |
1,541,002 | - | narU | b1469 | 0.22 | -0.8 |
1,541,375 | - | narU | b1469 | 0.49 | -0.5 |
1,541,375 | - | narU | b1469 | 0.49 | -0.9 |
1,541,535 | + | narU | b1469 | 0.60 | +0.7 |
1,541,599 | + | narU | b1469 | 0.65 | -1.0 |
Or see this region's nucleotide sequence