Strain Fitness in Escherichia coli BW25113 around b0147

Experiment: Carbenicillin 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbenicillin 0.008 mg/ml
160,507	+	dksA	b0145	0.79	-1.6
160,605	-				-0.6
160,605	-				-1.0
160,648	-				-1.0
160,664	+				-0.6
160,708	-				-1.7
160,710	+				-0.7
160,710	+				+0.5
160,806	+				-0.1
160,918	+	sfsA	b0146	0.19	-0.3
160,941	+	sfsA	b0146	0.23	-0.0
161,036	+	sfsA	b0146	0.36	+0.8
161,068	-	sfsA	b0146	0.41	+1.4
161,094	+	sfsA	b0146	0.44	+1.7
161,102	-	sfsA	b0146	0.45	+1.0
161,141	-	sfsA	b0146	0.51	+1.0
161,146	-	sfsA	b0146	0.52	+0.4
161,202	+	sfsA	b0146	0.60	+1.0
161,202	+	sfsA	b0146	0.60	+2.0
161,215	-	sfsA	b0146	0.61	-0.0
161,351	+	sfsA	b0146	0.81	+0.7
161,375	+	sfsA	b0146	0.84	+0.4
161,375	+	sfsA	b0146	0.84	+1.5
161,385	+	sfsA	b0146	0.86	+1.6
161,385	+	sfsA	b0146	0.86	+1.0
161,393	-	sfsA	b0146	0.87	+0.5
161,393	-	sfsA	b0146	0.87	+1.8
161,393	-	sfsA	b0146	0.87	-0.2
161,393	-	sfsA	b0146	0.87	+0.6
161,398	-	sfsA	b0146	0.87	+1.2
161,418	-				+2.6
161,418	-				+0.8
161,437	+				-0.2
161,463	+				+1.4
161,463	+				-0.0
161,463	+				+1.0
161,463	+				+1.3
161,471	-				+0.3
161,471	-				+0.5
161,471	-				+0.5
161,471	-				+1.2
161,529	+				+1.8
161,529	+				+1.2
161,532	+				+2.9
161,545	-				+2.8
161,564	+	yadP	b0147	0.12	+2.1
161,600	+	yadP	b0147	0.19	+2.2
161,652	+	yadP	b0147	0.28	+0.9
161,659	-	yadP	b0147	0.30	+1.6
161,714	+	yadP	b0147	0.40	+1.1
161,758	+	yadP	b0147	0.48	+0.7
161,758	+	yadP	b0147	0.48	+1.2
161,758	+	yadP	b0147	0.48	+1.7
161,780	+	yadP	b0147	0.53	+1.1
161,780	+	yadP	b0147	0.53	+1.4
161,791	+	yadP	b0147	0.55	+0.2
161,804	-	yadP	b0147	0.57	+1.2
161,854	+	yadP	b0147	0.66	+1.0
161,933	+	yadP	b0147	0.81	+1.2
161,933	+	yadP	b0147	0.81	+0.1
161,938	+	yadP	b0147	0.82	+1.2
161,945	+	yadP	b0147	0.84	+0.9
161,965	+	yadP	b0147	0.87	+0.4
162,008	+				+1.2
162,030	-				+1.0
162,038	-				+0.2
162,038	-				-1.6
162,068	-				+2.0
162,068	-				+2.0
162,071	-				-0.0
162,091	-				-0.6
162,091	-				-1.3
162,100	+				+0.2
162,129	+				+0.2
162,129	+				+1.8
162,137	-				-0.9
162,148	-				+0.5
162,171	+				+1.2
162,219	-				-0.8
162,421	+	hrpB	b0148	0.13	+0.8
162,432	-	hrpB	b0148	0.13	+3.0
162,432	-	hrpB	b0148	0.13	-1.5
162,433	-	hrpB	b0148	0.13	+0.9
162,434	-	hrpB	b0148	0.14	-1.7
162,434	-	hrpB	b0148	0.14	-0.4
162,451	+	hrpB	b0148	0.14	+0.5
162,459	-	hrpB	b0148	0.15	+3.9
162,459	-	hrpB	b0148	0.15	+3.4
162,584	-	hrpB	b0148	0.20	-0.2
162,584	-	hrpB	b0148	0.20	-0.8
162,584	-	hrpB	b0148	0.20	-0.0
162,636	-	hrpB	b0148	0.22	-0.9
162,674	+	hrpB	b0148	0.23	+2.2
162,707	+	hrpB	b0148	0.25	+1.3
162,707	+	hrpB	b0148	0.25	+1.3
162,820	-	hrpB	b0148	0.29	-0.8
162,825	-	hrpB	b0148	0.30	-0.5
162,828	+	hrpB	b0148	0.30	+0.5
162,837	+	hrpB	b0148	0.30	-0.4
162,837	+	hrpB	b0148	0.30	+0.9
162,839	+	hrpB	b0148	0.30	+2.0
162,852	-	hrpB	b0148	0.31	-0.2
162,973	-	hrpB	b0148	0.36	-0.1
162,983	-	hrpB	b0148	0.36	+0.1
162,983	-	hrpB	b0148	0.36	-1.2