Experiment: L-Malic (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PfGW456L13_4937 and PfGW456L13_4938 are separated by 296 nucleotides PfGW456L13_4938 and PfGW456L13_4939 are separated by 156 nucleotides
PfGW456L13_4937 - Periplasmic thiol:disulfide oxidoreductase DsbB, required for DsbA reoxidation, at 5,515,911 to 5,516,420
_4937
PfGW456L13_4938 - Flavohemoprotein (Hemoglobin-like protein) (Flavohemoglobin) (Nitric oxide dioxygenase) (EC 1.14.12.17), at 5,516,717 to 5,517,898
_4938
PfGW456L13_4939 - Functional role page for Anaerobic nitric oxide reductase transcription regulator NorR, at 5,518,055 to 5,519,605
_4939
Position (kb) 5516
5517
5518 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 5515.892 kb on + strand at 5515.892 kb on + strand at 5516.141 kb on + strand, within PfGW456L13_4937 at 5516.142 kb on - strand, within PfGW456L13_4937 at 5516.142 kb on - strand, within PfGW456L13_4937 at 5516.142 kb on - strand, within PfGW456L13_4937 at 5516.143 kb on + strand, within PfGW456L13_4937 at 5516.144 kb on - strand, within PfGW456L13_4937 at 5516.329 kb on + strand, within PfGW456L13_4937 at 5516.329 kb on + strand, within PfGW456L13_4937 at 5516.329 kb on + strand, within PfGW456L13_4937 at 5516.329 kb on + strand, within PfGW456L13_4937 at 5516.330 kb on - strand, within PfGW456L13_4937 at 5516.330 kb on - strand, within PfGW456L13_4937 at 5516.330 kb on - strand, within PfGW456L13_4937 at 5516.330 kb on - strand, within PfGW456L13_4937 at 5516.330 kb on - strand, within PfGW456L13_4937 at 5516.330 kb on - strand, within PfGW456L13_4937 at 5516.330 kb on - strand, within PfGW456L13_4937 at 5516.436 kb on + strand at 5516.436 kb on + strand at 5516.437 kb on - strand at 5516.437 kb on - strand at 5516.437 kb on - strand at 5516.437 kb on - strand at 5516.457 kb on + strand at 5516.457 kb on + strand at 5516.458 kb on - strand at 5516.458 kb on - strand at 5516.458 kb on - strand at 5516.514 kb on + strand at 5516.522 kb on - strand at 5516.522 kb on - strand at 5516.541 kb on + strand at 5516.613 kb on + strand at 5516.613 kb on + strand at 5516.613 kb on + strand at 5516.613 kb on + strand at 5516.613 kb on + strand at 5516.614 kb on - strand at 5516.718 kb on + strand at 5516.832 kb on + strand at 5516.832 kb on + strand at 5516.833 kb on - strand at 5516.833 kb on - strand at 5516.833 kb on - strand at 5516.833 kb on - strand at 5516.833 kb on - strand at 5516.833 kb on - strand at 5516.833 kb on - strand at 5516.833 kb on - strand at 5516.935 kb on - strand, within PfGW456L13_4938 at 5516.935 kb on - strand, within PfGW456L13_4938 at 5516.940 kb on + strand, within PfGW456L13_4938 at 5516.940 kb on + strand, within PfGW456L13_4938 at 5516.940 kb on + strand, within PfGW456L13_4938 at 5516.940 kb on + strand, within PfGW456L13_4938 at 5516.940 kb on + strand, within PfGW456L13_4938 at 5516.941 kb on - strand, within PfGW456L13_4938 at 5516.941 kb on - strand, within PfGW456L13_4938 at 5516.941 kb on - strand, within PfGW456L13_4938 at 5517.279 kb on + strand, within PfGW456L13_4938 at 5517.280 kb on - strand, within PfGW456L13_4938 at 5517.280 kb on - strand, within PfGW456L13_4938 at 5517.280 kb on - strand, within PfGW456L13_4938 at 5517.284 kb on - strand, within PfGW456L13_4938 at 5517.327 kb on + strand, within PfGW456L13_4938 at 5517.327 kb on + strand, within PfGW456L13_4938 at 5517.327 kb on + strand, within PfGW456L13_4938 at 5517.327 kb on + strand, within PfGW456L13_4938 at 5517.327 kb on + strand, within PfGW456L13_4938 at 5517.328 kb on - strand, within PfGW456L13_4938 at 5517.328 kb on - strand, within PfGW456L13_4938 at 5517.328 kb on - strand, within PfGW456L13_4938 at 5517.328 kb on - strand, within PfGW456L13_4938 at 5517.328 kb on - strand, within PfGW456L13_4938 at 5517.378 kb on + strand, within PfGW456L13_4938 at 5517.379 kb on - strand, within PfGW456L13_4938 at 5517.474 kb on + strand, within PfGW456L13_4938 at 5517.474 kb on + strand, within PfGW456L13_4938 at 5517.474 kb on + strand, within PfGW456L13_4938 at 5517.474 kb on + strand, within PfGW456L13_4938 at 5517.474 kb on + strand, within PfGW456L13_4938 at 5517.475 kb on - strand, within PfGW456L13_4938 at 5517.475 kb on - strand, within PfGW456L13_4938 at 5517.475 kb on - strand, within PfGW456L13_4938 at 5517.572 kb on + strand, within PfGW456L13_4938 at 5517.572 kb on + strand, within PfGW456L13_4938 at 5517.573 kb on - strand, within PfGW456L13_4938 at 5517.573 kb on - strand, within PfGW456L13_4938 at 5517.573 kb on - strand, within PfGW456L13_4938 at 5517.698 kb on - strand, within PfGW456L13_4938 at 5517.708 kb on + strand, within PfGW456L13_4938 at 5517.708 kb on + strand, within PfGW456L13_4938 at 5517.708 kb on + strand, within PfGW456L13_4938 at 5517.708 kb on + strand, within PfGW456L13_4938 at 5517.709 kb on - strand, within PfGW456L13_4938 at 5517.709 kb on - strand, within PfGW456L13_4938 at 5517.709 kb on - strand, within PfGW456L13_4938 at 5517.709 kb on - strand, within PfGW456L13_4938 at 5517.709 kb on - strand, within PfGW456L13_4938 at 5517.709 kb on - strand, within PfGW456L13_4938 at 5517.709 kb on - strand, within PfGW456L13_4938 at 5517.716 kb on + strand, within PfGW456L13_4938 at 5517.717 kb on - strand, within PfGW456L13_4938 at 5517.717 kb on - strand, within PfGW456L13_4938 at 5517.813 kb on + strand at 5517.814 kb on - strand at 5517.814 kb on - strand at 5517.898 kb on + strand at 5517.898 kb on + strand at 5517.898 kb on + strand at 5517.899 kb on - strand at 5518.027 kb on - strand at 5518.054 kb on + strand at 5518.055 kb on - strand at 5518.352 kb on + strand, within PfGW456L13_4939
Per-strain Table
Position Strand Gene LocusTag Fraction L-Malic (C) remove 5,515,892 + +0.5 5,515,892 + +1.8 5,516,141 + PfGW456L13_4937 0.45 +0.1 5,516,142 - PfGW456L13_4937 0.45 +1.8 5,516,142 - PfGW456L13_4937 0.45 +0.8 5,516,142 - PfGW456L13_4937 0.45 +0.1 5,516,143 + PfGW456L13_4937 0.45 -1.2 5,516,144 - PfGW456L13_4937 0.46 +1.6 5,516,329 + PfGW456L13_4937 0.82 +0.5 5,516,329 + PfGW456L13_4937 0.82 -0.8 5,516,329 + PfGW456L13_4937 0.82 -0.6 5,516,329 + PfGW456L13_4937 0.82 -0.7 5,516,330 - PfGW456L13_4937 0.82 +0.2 5,516,330 - PfGW456L13_4937 0.82 +0.9 5,516,330 - PfGW456L13_4937 0.82 -0.7 5,516,330 - PfGW456L13_4937 0.82 -2.0 5,516,330 - PfGW456L13_4937 0.82 -1.2 5,516,330 - PfGW456L13_4937 0.82 -0.4 5,516,330 - PfGW456L13_4937 0.82 +0.5 5,516,436 + +1.1 5,516,436 + -0.1 5,516,437 - -0.4 5,516,437 - +0.5 5,516,437 - -0.6 5,516,437 - -0.2 5,516,457 + +0.4 5,516,457 + -2.6 5,516,458 - -3.3 5,516,458 - -0.1 5,516,458 - -0.2 5,516,514 + +0.7 5,516,522 - +0.3 5,516,522 - +0.8 5,516,541 + -0.8 5,516,613 + -2.1 5,516,613 + -2.1 5,516,613 + -0.8 5,516,613 + +1.7 5,516,613 + +0.9 5,516,614 - +0.9 5,516,718 + +1.4 5,516,832 + +0.9 5,516,832 + -1.0 5,516,833 - +0.5 5,516,833 - -2.6 5,516,833 - -2.1 5,516,833 - +0.7 5,516,833 - +0.7 5,516,833 - +0.5 5,516,833 - +0.1 5,516,833 - -0.1 5,516,935 - PfGW456L13_4938 0.18 +1.4 5,516,935 - PfGW456L13_4938 0.18 +0.8 5,516,940 + PfGW456L13_4938 0.19 +0.9 5,516,940 + PfGW456L13_4938 0.19 +0.2 5,516,940 + PfGW456L13_4938 0.19 -1.0 5,516,940 + PfGW456L13_4938 0.19 -0.2 5,516,940 + PfGW456L13_4938 0.19 -0.3 5,516,941 - PfGW456L13_4938 0.19 -0.3 5,516,941 - PfGW456L13_4938 0.19 +1.6 5,516,941 - PfGW456L13_4938 0.19 +1.4 5,517,279 + PfGW456L13_4938 0.48 -0.7 5,517,280 - PfGW456L13_4938 0.48 -1.2 5,517,280 - PfGW456L13_4938 0.48 +0.5 5,517,280 - PfGW456L13_4938 0.48 +0.4 5,517,284 - PfGW456L13_4938 0.48 -0.8 5,517,327 + PfGW456L13_4938 0.52 -0.1 5,517,327 + PfGW456L13_4938 0.52 -0.9 5,517,327 + PfGW456L13_4938 0.52 -0.0 5,517,327 + PfGW456L13_4938 0.52 +0.0 5,517,327 + PfGW456L13_4938 0.52 +0.6 5,517,328 - PfGW456L13_4938 0.52 +0.9 5,517,328 - PfGW456L13_4938 0.52 -0.0 5,517,328 - PfGW456L13_4938 0.52 -1.0 5,517,328 - PfGW456L13_4938 0.52 -0.4 5,517,328 - PfGW456L13_4938 0.52 -0.6 5,517,378 + PfGW456L13_4938 0.56 -0.1 5,517,379 - PfGW456L13_4938 0.56 -1.7 5,517,474 + PfGW456L13_4938 0.64 +0.4 5,517,474 + PfGW456L13_4938 0.64 +0.4 5,517,474 + PfGW456L13_4938 0.64 -1.0 5,517,474 + PfGW456L13_4938 0.64 +0.2 5,517,474 + PfGW456L13_4938 0.64 +1.7 5,517,475 - PfGW456L13_4938 0.64 -1.2 5,517,475 - PfGW456L13_4938 0.64 +1.2 5,517,475 - PfGW456L13_4938 0.64 +1.1 5,517,572 + PfGW456L13_4938 0.72 -1.1 5,517,572 + PfGW456L13_4938 0.72 -1.6 5,517,573 - PfGW456L13_4938 0.72 -0.4 5,517,573 - PfGW456L13_4938 0.72 -1.6 5,517,573 - PfGW456L13_4938 0.72 -0.9 5,517,698 - PfGW456L13_4938 0.83 +0.1 5,517,708 + PfGW456L13_4938 0.84 -0.1 5,517,708 + PfGW456L13_4938 0.84 +0.5 5,517,708 + PfGW456L13_4938 0.84 -1.7 5,517,708 + PfGW456L13_4938 0.84 -0.8 5,517,709 - PfGW456L13_4938 0.84 +0.1 5,517,709 - PfGW456L13_4938 0.84 +0.1 5,517,709 - PfGW456L13_4938 0.84 -0.1 5,517,709 - PfGW456L13_4938 0.84 -0.4 5,517,709 - PfGW456L13_4938 0.84 +0.3 5,517,709 - PfGW456L13_4938 0.84 -0.8 5,517,709 - PfGW456L13_4938 0.84 -0.2 5,517,716 + PfGW456L13_4938 0.85 -0.6 5,517,717 - PfGW456L13_4938 0.85 +0.6 5,517,717 - PfGW456L13_4938 0.85 -0.2 5,517,813 + +0.7 5,517,814 - +0.4 5,517,814 - -0.3 5,517,898 + -0.9 5,517,898 + +0.8 5,517,898 + -0.1 5,517,899 - -0.2 5,518,027 - +0.2 5,518,054 + -0.6 5,518,055 - -0.3 5,518,352 + PfGW456L13_4939 0.19 -0.1
Or see this region's nucleotide sequence