Strain Fitness in Pseudomonas fluorescens GW456-L13 around PfGW456L13_4382

Experiment: L-Malic (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Malic (C)
4,895,211	+		PfGW456L13_4381	0.45	-2.1
4,895,212	-		PfGW456L13_4381	0.45	-0.2
4,895,384	+		PfGW456L13_4381	0.56	-3.2
4,895,384	+		PfGW456L13_4381	0.56	+0.3
4,895,384	+		PfGW456L13_4381	0.56	+2.3
4,895,384	+		PfGW456L13_4381	0.56	+0.9
4,895,385	-		PfGW456L13_4381	0.56	-0.4
4,895,385	-		PfGW456L13_4381	0.56	-0.3
4,895,414	+		PfGW456L13_4381	0.58	-0.9
4,895,414	+		PfGW456L13_4381	0.58	+0.7
4,895,414	+		PfGW456L13_4381	0.58	+0.4
4,895,414	+		PfGW456L13_4381	0.58	+0.1
4,895,414	+		PfGW456L13_4381	0.58	-1.6
4,895,414	+		PfGW456L13_4381	0.58	+1.0
4,895,414	+		PfGW456L13_4381	0.58	+0.8
4,895,415	-		PfGW456L13_4381	0.58	-0.8
4,895,415	-		PfGW456L13_4381	0.58	-1.3
4,895,415	-		PfGW456L13_4381	0.58	-0.5
4,895,437	-		PfGW456L13_4381	0.60	-0.8
4,895,505	+		PfGW456L13_4381	0.64	+0.2
4,895,603	+		PfGW456L13_4381	0.70	+1.7
4,895,603	+		PfGW456L13_4381	0.70	+0.5
4,895,603	+		PfGW456L13_4381	0.70	+2.1
4,895,603	+		PfGW456L13_4381	0.70	+0.4
4,895,604	-		PfGW456L13_4381	0.70	+0.5
4,895,604	-		PfGW456L13_4381	0.70	-0.7
4,895,609	+		PfGW456L13_4381	0.71	+0.2
4,895,609	+		PfGW456L13_4381	0.71	+0.4
4,895,609	+		PfGW456L13_4381	0.71	-1.9
4,895,609	+		PfGW456L13_4381	0.71	+1.1
4,895,610	-		PfGW456L13_4381	0.71	-0.0
4,895,610	-		PfGW456L13_4381	0.71	-2.9
4,895,610	-		PfGW456L13_4381	0.71	-0.5
4,895,634	-		PfGW456L13_4381	0.72	-2.0
4,895,669	+		PfGW456L13_4381	0.74	-0.2
4,895,669	+		PfGW456L13_4381	0.74	+1.2
4,895,669	+		PfGW456L13_4381	0.74	+0.7
4,895,669	+		PfGW456L13_4381	0.74	-0.8
4,895,670	-		PfGW456L13_4381	0.75	-1.3
4,895,670	-		PfGW456L13_4381	0.75	+0.8
4,895,670	-		PfGW456L13_4381	0.75	-1.0
4,895,670	-		PfGW456L13_4381	0.75	+0.3
4,895,670	-		PfGW456L13_4381	0.75	+2.7
4,895,741	+		PfGW456L13_4381	0.79	-0.8
4,895,741	+		PfGW456L13_4381	0.79	-0.2
4,895,741	+		PfGW456L13_4381	0.79	-0.8
4,895,742	-		PfGW456L13_4381	0.79	+3.8
4,895,742	-		PfGW456L13_4381	0.79	+1.5
4,896,023	+				+0.6
4,896,023	+				-0.2
4,896,023	+				+1.1
4,896,024	-				-2.8
4,896,044	+				-0.7
4,896,047	+				-0.7
4,896,047	+				-0.7
4,896,047	+				-0.8
4,896,048	-				-0.3
4,896,048	-				+1.1
4,896,074	+				+0.3
4,896,075	-				-2.5
4,896,075	-				+0.5
4,896,075	-				-0.2
4,896,075	-				+1.3
4,896,075	-				+0.3
4,896,075	-				-0.2
4,896,084	+				-2.1
4,896,150	+				-0.1
4,896,150	+				-0.6
4,896,150	+				-0.3
4,896,150	+				+1.6
4,896,150	+				+1.8
4,896,150	+				+0.8
4,896,151	-				+1.6
4,896,151	-				+0.2
4,896,151	-				-0.3
4,896,151	-				+1.0
4,896,151	-				+1.4
4,896,151	-				+0.5
4,896,151	-				+1.1
4,896,153	+				+1.9
4,896,153	+				-1.1
4,896,153	+				-2.8
4,896,153	+				+1.1
4,896,153	+				-0.5
4,896,154	-				+0.0
4,896,154	-				+0.2
4,896,154	-				+0.8
4,896,162	+				+0.5
4,896,162	+				-0.3
4,896,163	-				+1.6
4,896,163	-				-0.8
4,896,163	-				+1.2
4,896,312	+		PfGW456L13_4382	0.11	+0.3
4,896,312	+		PfGW456L13_4382	0.11	-3.1
4,896,312	+		PfGW456L13_4382	0.11	+0.4
4,896,313	-		PfGW456L13_4382	0.11	+0.8
4,896,313	-		PfGW456L13_4382	0.11	-0.2
4,896,636	+		PfGW456L13_4382	0.27	+1.7
4,896,732	+		PfGW456L13_4382	0.32	-0.3
4,896,732	+		PfGW456L13_4382	0.32	+0.8
4,896,732	+		PfGW456L13_4382	0.32	-1.5
4,896,732	+		PfGW456L13_4382	0.32	-1.3
4,896,733	-		PfGW456L13_4382	0.32	-1.0
4,896,733	-		PfGW456L13_4382	0.32	+1.3
4,896,733	-		PfGW456L13_4382	0.32	+2.1
4,896,733	-		PfGW456L13_4382	0.32	-1.1
4,896,733	-		PfGW456L13_4382	0.32	+1.3
4,896,733	-		PfGW456L13_4382	0.32	+1.2
4,896,736	+		PfGW456L13_4382	0.32	+0.1
4,896,768	+		PfGW456L13_4382	0.33	+1.3
4,896,768	+		PfGW456L13_4382	0.33	-1.5
4,896,768	+		PfGW456L13_4382	0.33	+2.2
4,896,768	+		PfGW456L13_4382	0.33	-0.5
4,896,769	-		PfGW456L13_4382	0.34	-0.5
4,896,769	-		PfGW456L13_4382	0.34	+0.7
4,896,839	-		PfGW456L13_4382	0.37	-0.4
4,897,011	+		PfGW456L13_4382	0.45	+0.0
4,897,012	-		PfGW456L13_4382	0.45	-1.1
4,897,012	-		PfGW456L13_4382	0.45	-0.8
4,897,012	-		PfGW456L13_4382	0.45	-2.3
4,897,012	-		PfGW456L13_4382	0.45	+0.2
4,897,041	+		PfGW456L13_4382	0.47	+0.7
4,897,290	+		PfGW456L13_4382	0.59	+0.6
4,897,290	+		PfGW456L13_4382	0.59	-0.9
4,897,458	+		PfGW456L13_4382	0.67	+0.4
4,897,458	+		PfGW456L13_4382	0.67	+3.3
4,897,458	+		PfGW456L13_4382	0.67	+0.2
4,897,458	+		PfGW456L13_4382	0.67	+1.0
4,897,458	+		PfGW456L13_4382	0.67	-1.8
4,897,459	-		PfGW456L13_4382	0.67	-0.3
4,897,459	-		PfGW456L13_4382	0.67	+0.4
4,897,459	-		PfGW456L13_4382	0.67	+0.6
4,897,459	-		PfGW456L13_4382	0.67	+0.3
4,897,459	-		PfGW456L13_4382	0.67	-0.9
4,897,459	-		PfGW456L13_4382	0.67	-1.0
4,897,459	-		PfGW456L13_4382	0.67	-2.0
4,897,459	-		PfGW456L13_4382	0.67	+1.2
4,897,459	-		PfGW456L13_4382	0.67	+1.1
4,897,459	-		PfGW456L13_4382	0.67	+0.7
4,897,459	-		PfGW456L13_4382	0.67	+0.4
4,897,459	-		PfGW456L13_4382	0.67	-0.6
4,897,468	-		PfGW456L13_4382	0.68	-0.7
4,897,468	-		PfGW456L13_4382	0.68	-2.5
4,897,606	+		PfGW456L13_4382	0.74	-2.8
4,897,607	-		PfGW456L13_4382	0.74	+1.6
4,897,607	-		PfGW456L13_4382	0.74	-0.2
4,897,607	-		PfGW456L13_4382	0.74	-3.0
4,897,613	-		PfGW456L13_4382	0.75	+0.1
4,897,613	-		PfGW456L13_4382	0.75	+1.0
4,897,869	+		PfGW456L13_4382	0.87	-0.3
4,897,869	+		PfGW456L13_4382	0.87	-0.1
4,897,869	+		PfGW456L13_4382	0.87	+0.9
4,897,869	+		PfGW456L13_4382	0.87	+1.2
4,897,869	+		PfGW456L13_4382	0.87	-0.9
4,897,869	+		PfGW456L13_4382	0.87	-0.1
4,897,923	+		PfGW456L13_4382	0.90	+1.6
4,897,924	-				+0.3
4,897,933	-				-0.3
4,897,933	-				+1.0
4,898,084	-				+0.6
4,898,084	-				-2.6
4,898,140	+				-3.4
4,898,141	-				+0.4
4,898,141	-				+0.3
4,898,141	-				+0.2
4,898,141	-				-1.2
4,898,141	-				+0.4
4,898,141	-				-0.8
4,898,142	+				+0.4
4,898,142	+				+0.5
4,898,142	+				+0.3
4,898,142	+				+0.8
4,898,142	+				-2.1
4,898,142	+				+0.4
4,898,142	+				-0.8
4,898,142	+				+0.2
4,898,142	+				-1.5
4,898,142	+				+0.8
4,898,143	-				-1.8
4,898,143	-				-0.8
4,898,143	-				-3.0
4,898,143	-				-2.4
4,898,143	-				+0.7
4,898,143	-				-0.0
4,898,143	-				-2.1
4,898,143	-				+1.0
4,898,153	+				+1.1
4,898,153	+				-1.3
4,898,153	+				+0.3
4,898,154	-				+0.4
4,898,156	-				-0.7
4,898,163	+				+2.6
4,898,186	+				+0.1
4,898,186	+				-0.6
4,898,187	-				-0.1
4,898,187	-				+1.4
4,898,187	-				-0.7
4,898,195	+				+0.2
4,898,196	-				-0.3
4,898,196	-				-0.9
4,898,215	+				-3.3
4,898,237	+				+1.0
4,898,237	+				+0.5
4,898,238	-				+0.5
4,898,238	-				-0.1
4,898,278	+				+0.4
4,898,279	-				+0.0
4,898,279	-				+2.3
4,898,322	-		PfGW456L13_4383	0.13	-0.6
4,898,347	+		PfGW456L13_4383	0.15	-0.4
4,898,347	+		PfGW456L13_4383	0.15	+1.9
4,898,348	-		PfGW456L13_4383	0.15	-0.3
4,898,348	-		PfGW456L13_4383	0.15	-1.6
4,898,348	-		PfGW456L13_4383	0.15	-0.6
4,898,348	-		PfGW456L13_4383	0.15	+0.1
4,898,348	-		PfGW456L13_4383	0.15	+0.4
4,898,372	+		PfGW456L13_4383	0.17	+1.8
4,898,373	-		PfGW456L13_4383	0.17	+0.7
4,898,373	-		PfGW456L13_4383	0.17	-0.8
4,898,381	+		PfGW456L13_4383	0.18	-1.8
4,898,381	+		PfGW456L13_4383	0.18	-1.5
4,898,382	-		PfGW456L13_4383	0.18	+0.5
4,898,466	+		PfGW456L13_4383	0.25	+3.3
4,898,466	+		PfGW456L13_4383	0.25	+1.3
4,898,466	+		PfGW456L13_4383	0.25	+0.8
4,898,467	-		PfGW456L13_4383	0.25	-0.6
4,898,467	-		PfGW456L13_4383	0.25	+0.4
4,898,467	-		PfGW456L13_4383	0.25	-2.9
4,898,467	-		PfGW456L13_4383	0.25	-2.1
4,898,467	-		PfGW456L13_4383	0.25	+0.4
4,898,467	-		PfGW456L13_4383	0.25	+0.0
4,898,467	-		PfGW456L13_4383	0.25	-0.8
4,898,699	+		PfGW456L13_4383	0.43	-2.7
4,898,699	+		PfGW456L13_4383	0.43	+0.0
4,898,699	+		PfGW456L13_4383	0.43	+0.5
4,898,699	+		PfGW456L13_4383	0.43	+0.4
4,898,700	-		PfGW456L13_4383	0.43	-1.9
4,898,756	+		PfGW456L13_4383	0.47	-1.4
4,898,756	+		PfGW456L13_4383	0.47	+0.9
4,898,756	+		PfGW456L13_4383	0.47	-1.8
4,898,756	+		PfGW456L13_4383	0.47	+0.5
4,898,756	+		PfGW456L13_4383	0.47	+1.9
4,898,756	+		PfGW456L13_4383	0.47	-1.0
4,898,757	-		PfGW456L13_4383	0.47	-0.0
4,898,757	-		PfGW456L13_4383	0.47	-1.4
4,898,757	-		PfGW456L13_4383	0.47	+1.3
4,898,757	-		PfGW456L13_4383	0.47	+1.3
4,898,757	-		PfGW456L13_4383	0.47	-0.1
4,898,757	-		PfGW456L13_4383	0.47	+0.4
4,898,757	-		PfGW456L13_4383	0.47	+0.0
4,898,757	-		PfGW456L13_4383	0.47	-1.3