Strain Fitness in Pseudomonas fluorescens GW456-L13 around PfGW456L13_4155

Experiment: L-Malic (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Malic (C)
4,670,572	+				-3.3
4,670,573	-				+2.2
4,670,573	-				-0.1
4,670,573	-				-0.2
4,670,663	+		PfGW456L13_4153	0.32	+1.8
4,670,664	-		PfGW456L13_4153	0.32	+1.6
4,670,664	-		PfGW456L13_4153	0.32	-0.7
4,670,672	+		PfGW456L13_4153	0.34	-1.3
4,670,672	+		PfGW456L13_4153	0.34	-0.7
4,670,672	+		PfGW456L13_4153	0.34	-0.9
4,670,672	+		PfGW456L13_4153	0.34	+0.3
4,670,672	+		PfGW456L13_4153	0.34	+0.2
4,670,672	+		PfGW456L13_4153	0.34	+0.8
4,670,672	+		PfGW456L13_4153	0.34	+0.2
4,670,672	+		PfGW456L13_4153	0.34	-0.6
4,670,672	+		PfGW456L13_4153	0.34	+1.8
4,670,672	+		PfGW456L13_4153	0.34	+0.3
4,670,673	-		PfGW456L13_4153	0.34	+0.7
4,670,673	-		PfGW456L13_4153	0.34	+1.1
4,670,673	-		PfGW456L13_4153	0.34	-0.1
4,670,673	-		PfGW456L13_4153	0.34	-1.0
4,670,673	-		PfGW456L13_4153	0.34	-0.2
4,670,673	-		PfGW456L13_4153	0.34	-1.7
4,670,673	-		PfGW456L13_4153	0.34	+1.2
4,670,673	-		PfGW456L13_4153	0.34	+1.6
4,670,673	-		PfGW456L13_4153	0.34	+0.2
4,670,673	-		PfGW456L13_4153	0.34	-0.7
4,670,673	-		PfGW456L13_4153	0.34	+0.1
4,670,673	-		PfGW456L13_4153	0.34	-0.5
4,670,673	-		PfGW456L13_4153	0.34	+0.1
4,670,673	-		PfGW456L13_4153	0.34	-2.9
4,670,673	-		PfGW456L13_4153	0.34	+1.6
4,670,801	+		PfGW456L13_4153	0.72	-0.0
4,670,802	-		PfGW456L13_4153	0.72	+0.1
4,670,802	-		PfGW456L13_4153	0.72	+0.2
4,670,886	-				+1.6
4,670,925	-				-1.3
4,671,022	+				+0.1
4,671,055	-				-0.5
4,671,316	+		PfGW456L13_4154	0.88	+0.4
4,671,316	+		PfGW456L13_4154	0.88	-0.7
4,671,316	+		PfGW456L13_4154	0.88	+1.4
4,671,316	+		PfGW456L13_4154	0.88	+0.8
4,671,317	-		PfGW456L13_4154	0.89	-1.0
4,671,317	-		PfGW456L13_4154	0.89	-1.7
4,671,317	-		PfGW456L13_4154	0.89	-1.0
4,671,317	-		PfGW456L13_4154	0.89	+0.5
4,671,358	-				-2.7
4,671,358	-				+1.4
4,671,376	+				-0.8
4,671,376	+				+0.4
4,671,376	+				+1.0
4,671,376	+				-0.8
4,671,377	-				+1.6
4,671,377	-				-1.0
4,671,382	+				+0.1
4,671,382	+				+1.2
4,671,382	+				-1.8
4,671,383	-				-1.9
4,671,383	-				-1.2
4,671,397	-				+2.1
4,671,443	+				-1.5
4,671,443	+				+1.0
4,671,484	+				+0.8
4,671,537	+				+0.9
4,671,567	+				-1.0
4,671,568	-				+0.5
4,671,568	-				-0.5
4,671,596	+				-2.9
4,671,596	+				+0.4
4,671,596	+				+2.0
4,671,596	+				-2.0
4,671,596	+				-2.9
4,671,597	-				+1.6
4,671,597	-				-0.8
4,671,597	-				+0.8
4,671,597	-				-1.5
4,671,597	-				-0.2
4,671,597	-				+0.6
4,671,638	+				+0.3
4,671,638	+				-1.1
4,671,638	+				+0.5
4,671,638	+				+1.2
4,671,638	+				-1.4
4,671,638	+				-0.1
4,671,638	+				+0.8
4,671,638	+				-2.8
4,671,638	+				-1.4
4,671,638	+				+0.3
4,671,639	-				-0.6
4,671,639	-				-1.6
4,671,639	-				+0.1
4,671,639	-				-0.4
4,671,639	-				-0.7
4,671,639	-				-1.0
4,671,639	-				-0.6
4,671,639	-				-1.2
4,671,752	+		PfGW456L13_4155	0.22	-0.7
4,671,752	+		PfGW456L13_4155	0.22	-2.3
4,671,753	-		PfGW456L13_4155	0.22	-1.3
4,671,753	-		PfGW456L13_4155	0.22	-2.4
4,671,773	+		PfGW456L13_4155	0.24	-2.2
4,671,773	+		PfGW456L13_4155	0.24	-0.7
4,671,773	+		PfGW456L13_4155	0.24	+0.3
4,671,773	+		PfGW456L13_4155	0.24	-3.7
4,671,905	+		PfGW456L13_4155	0.39	-3.4
4,671,905	+				-0.7
4,671,906	-		PfGW456L13_4155	0.40	+0.3
4,671,906	-		PfGW456L13_4155	0.40	-0.2
4,672,242	-		PfGW456L13_4155	0.78	-1.3
4,672,242	-		PfGW456L13_4155	0.78	-1.6
4,672,395	-				-0.0
4,672,395	-				-1.8
4,672,409	+				-0.1
4,672,529	+				-1.0
4,672,529	+				+0.4
4,672,530	-				-1.6
4,672,530	-				+0.4
4,672,706	-		PfGW456L13_4156	0.58	-0.1
4,672,706	-		PfGW456L13_4156	0.58	+1.3
4,672,777	+				+1.3
4,672,777	+				+0.5
4,672,777	+				-0.7
4,672,777	+				+1.1
4,672,777	+				-1.1
4,672,777	+				-0.2
4,672,778	-				+1.3
4,672,778	-				-0.5
4,672,778	-				-2.0
4,672,778	-				+0.5
4,672,778	-				-0.2
4,672,778	-				+1.1
4,672,778	-				-0.3
4,672,808	+				+1.9
4,672,809	-				+1.0
4,672,824	-				+0.8
4,672,914	+				+0.8
4,672,964	+		PfGW456L13_4157	0.18	+0.4
4,672,964	+		PfGW456L13_4157	0.18	-0.1
4,673,171	+		PfGW456L13_4157	0.57	-0.9
4,673,171	+		PfGW456L13_4157	0.57	+0.6
4,673,171	+		PfGW456L13_4157	0.57	-0.5
4,673,171	+		PfGW456L13_4157	0.57	+1.0
4,673,171	+		PfGW456L13_4157	0.57	+0.3
4,673,171	+		PfGW456L13_4157	0.57	-1.2
4,673,171	+		PfGW456L13_4157	0.57	-1.2
4,673,171	+		PfGW456L13_4157	0.57	+0.9
4,673,171	+		PfGW456L13_4157	0.57	-1.2
4,673,171	+		PfGW456L13_4157	0.57	-2.8
4,673,171	+		PfGW456L13_4157	0.57	+1.3
4,673,172	-		PfGW456L13_4157	0.57	+0.4
4,673,172	-		PfGW456L13_4157	0.57	-1.5
4,673,172	-		PfGW456L13_4157	0.57	+0.7
4,673,172	-		PfGW456L13_4157	0.57	+1.1
4,673,172	-		PfGW456L13_4157	0.57	-0.0
4,673,172	-		PfGW456L13_4157	0.57	+1.0
4,673,172	-		PfGW456L13_4157	0.57	+0.5
4,673,172	-		PfGW456L13_4157	0.57	+1.9
4,673,172	-		PfGW456L13_4157	0.57	-1.4
4,673,255	+		PfGW456L13_4157	0.73	-0.1
4,673,256	-		PfGW456L13_4157	0.73	-0.7
4,673,300	+		PfGW456L13_4157	0.82	-0.6
4,673,300	+		PfGW456L13_4157	0.82	+0.0
4,673,301	-		PfGW456L13_4157	0.82	+1.3
4,673,301	-		PfGW456L13_4157	0.82	-2.0
4,673,301	-		PfGW456L13_4157	0.82	-0.8