Strain Fitness in Pseudomonas fluorescens GW456-L13 around PfGW456L13_3984

Experiment: L-Malic (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Malic (C)
4,467,770	+				-0.1
4,467,770	+				+0.5
4,467,770	+				+0.5
4,467,771	-				-0.1
4,467,771	-				-1.3
4,467,779	+				-0.8
4,467,789	+				-1.6
4,467,790	-				-1.9
4,467,791	+				+0.5
4,467,791	+				+0.2
4,467,791	+				-0.4
4,467,791	+				-0.6
4,467,792	-				-0.2
4,467,792	-				-2.0
4,467,792	-				+0.2
4,467,792	-				-0.3
4,467,792	-				-0.7
4,467,798	-				+0.5
4,467,798	-				+0.4
4,467,818	-				-0.9
4,467,818	-				-0.1
4,467,818	-				-1.0
4,467,818	-				-1.4
4,467,818	-				-0.8
4,467,818	-				-0.3
4,467,859	-				-2.1
4,467,859	-				+0.2
4,467,877	-				-0.6
4,467,908	-				-0.7
4,468,140	+				+0.8
4,468,140	+				+2.0
4,468,140	+				-1.1
4,468,141	-				-1.1
4,468,141	-				-2.6
4,468,141	-				+0.5
4,468,141	-				-0.9
4,468,249	+				-2.0
4,468,249	+				-2.2
4,468,249	+				-0.9
4,468,249	+				+1.2
4,468,249	+				-2.4
4,468,250	-				-1.4
4,468,250	-				-2.0
4,468,250	-				-1.8
4,468,250	-				-1.6
4,468,250	-				-1.2
4,468,250	-				-2.7
4,468,277	+				-1.3
4,468,277	+				+0.5
4,468,278	-				-1.9
4,468,278	-				-0.9
4,468,297	+				+1.2
4,468,326	-				-0.4
4,468,326	-				-0.9
4,468,326	-				-0.9
4,468,339	+				-0.5
4,468,339	+				-2.7
4,468,339	+				+0.9
4,468,339	+				-0.8
4,468,339	+				+0.4
4,468,339	+				+1.2
4,468,339	+				+0.3
4,468,339	+				-1.9
4,468,339	+				-0.4
4,468,339	+				-1.1
4,468,339	+				-0.5
4,468,340	-				-0.2
4,468,340	-				+1.2
4,468,340	-				-3.6
4,468,340	-				-1.6
4,468,340	-				-1.1
4,468,340	-				+0.1
4,468,340	-				-1.8
4,468,340	-				-1.8
4,468,340	-				-0.3
4,468,340	-				-0.7
4,468,340	-				-1.0
4,468,464	+				+1.0
4,468,464	+				-2.6
4,468,464	+				-1.2
4,468,464	+				+0.5
4,468,464	+				-0.9
4,468,464	+				+0.8
4,468,464	+				+0.4
4,468,464	+				-2.9
4,468,464	+				-0.4
4,468,465	-				-2.1
4,468,465	-				-0.2
4,468,465	-				+0.0
4,468,543	+				+0.5
4,468,543	+				-1.1
4,468,544	-				-0.1
4,468,544	-				+0.4
4,468,603	+				+1.3
4,468,603	+				+0.4
4,468,677	+				-2.7
4,468,690	+				-0.4
4,468,690	+				-1.4
4,468,690	+				-1.5
4,468,691	-				-1.4
4,468,691	-				-4.1
4,468,691	-				-2.2
4,468,691	-				-0.9
4,468,691	-				-0.6
4,468,706	-				-1.7
4,468,748	+				-0.9
4,468,748	+				-0.8
4,468,748	+				-2.7
4,468,748	+				-0.7
4,468,749	-				-0.9
4,468,749	-				-1.8
4,468,751	+				-0.8
4,468,751	+				+0.9
4,468,751	+				-1.9
4,468,751	+				-0.6
4,468,751	+				-1.6
4,468,752	-				-2.7
4,468,752	-				-1.8
4,468,752	-				-0.8
4,468,752	-				+1.8
4,468,752	-				+0.2
4,468,752	-				-1.4
4,468,752	-				-0.4
4,468,753	+				-2.7
4,468,754	-				-1.1
4,468,777	+				-1.2
4,468,777	+				-3.2
4,468,777	+				-0.2
4,468,778	-				-1.7
4,468,778	-				-2.1
4,468,778	-				-3.1
4,468,778	-				-2.7
4,468,832	+		PfGW456L13_3984	0.12	+0.1
4,468,833	-		PfGW456L13_3984	0.12	-2.5
4,468,870	+		PfGW456L13_3984	0.15	+1.2
4,468,870	+		PfGW456L13_3984	0.15	-0.8
4,468,871	-		PfGW456L13_3984	0.16	-0.1
4,468,897	-		PfGW456L13_3984	0.18	-2.4
4,468,897	-		PfGW456L13_3984	0.18	-0.3
4,468,907	-		PfGW456L13_3984	0.19	-0.6
4,468,907	-		PfGW456L13_3984	0.19	-1.9
4,468,940	+				+1.2
4,468,940	+		PfGW456L13_3984	0.22	-1.9
4,468,940	+		PfGW456L13_3984	0.22	+0.1
4,468,940	+		PfGW456L13_3984	0.22	-2.8
4,468,940	+		PfGW456L13_3984	0.22	-0.0
4,468,940	+		PfGW456L13_3984	0.22	+0.7
4,468,940	+		PfGW456L13_3984	0.22	-1.9
4,468,940	+		PfGW456L13_3984	0.22	-1.8
4,468,941	-		PfGW456L13_3984	0.22	-0.4
4,468,941	-		PfGW456L13_3984	0.22	-0.5
4,468,941	-		PfGW456L13_3984	0.22	+0.3
4,468,941	-		PfGW456L13_3984	0.22	+0.5
4,468,941	-		PfGW456L13_3984	0.22	-2.4
4,468,941	-		PfGW456L13_3984	0.22	-0.2
4,468,941	-		PfGW456L13_3984	0.22	-0.9
4,468,972	-		PfGW456L13_3984	0.24	-0.9
4,468,972	-		PfGW456L13_3984	0.24	-1.4
4,468,972	-		PfGW456L13_3984	0.24	-1.4
4,469,053	+		PfGW456L13_3984	0.31	-0.5
4,469,054	-		PfGW456L13_3984	0.32	-3.0
4,469,054	-		PfGW456L13_3984	0.32	-0.5
4,469,087	+		PfGW456L13_3984	0.34	-1.5
4,469,088	-		PfGW456L13_3984	0.35	-2.4
4,469,186	+		PfGW456L13_3984	0.43	-2.2
4,469,186	+		PfGW456L13_3984	0.43	-1.5
4,469,186	+		PfGW456L13_3984	0.43	-2.1
4,469,186	+		PfGW456L13_3984	0.43	-0.2
4,469,186	+		PfGW456L13_3984	0.43	+0.8
4,469,187	-				-0.4
4,469,187	-		PfGW456L13_3984	0.43	-0.2
4,469,187	-		PfGW456L13_3984	0.43	-1.9
4,469,187	-		PfGW456L13_3984	0.43	-0.6
4,469,188	+		PfGW456L13_3984	0.43	+0.3
4,469,188	+		PfGW456L13_3984	0.43	-3.1
4,469,188	+		PfGW456L13_3984	0.43	-0.9
4,469,189	-		PfGW456L13_3984	0.43	-3.5
4,469,189	-		PfGW456L13_3984	0.43	-1.5
4,469,209	+		PfGW456L13_3984	0.45	-1.9
4,469,209	+		PfGW456L13_3984	0.45	+0.2
4,469,228	+		PfGW456L13_3984	0.47	-2.6
4,469,228	+		PfGW456L13_3984	0.47	+0.2
4,469,229	-		PfGW456L13_3984	0.47	-1.6
4,469,229	-		PfGW456L13_3984	0.47	-0.4
4,469,229	-		PfGW456L13_3984	0.47	+1.2
4,469,230	+		PfGW456L13_3984	0.47	+0.4
4,469,230	+		PfGW456L13_3984	0.47	-0.9
4,469,230	+		PfGW456L13_3984	0.47	-0.5
4,469,230	+		PfGW456L13_3984	0.47	-1.3
4,469,230	+		PfGW456L13_3984	0.47	+0.0
4,469,230	+		PfGW456L13_3984	0.47	-2.2
4,469,230	+		PfGW456L13_3984	0.47	-1.9
4,469,230	+		PfGW456L13_3984	0.47	-1.0
4,469,230	+		PfGW456L13_3984	0.47	+0.2
4,469,230	+		PfGW456L13_3984	0.47	-1.4
4,469,230	+		PfGW456L13_3984	0.47	+0.0
4,469,230	+		PfGW456L13_3984	0.47	-0.9
4,469,230	+		PfGW456L13_3984	0.47	-0.7
4,469,230	+		PfGW456L13_3984	0.47	-0.7
4,469,230	+		PfGW456L13_3984	0.47	-2.9
4,469,231	-		PfGW456L13_3984	0.47	-0.5
4,469,231	-		PfGW456L13_3984	0.47	-0.4
4,469,231	-		PfGW456L13_3984	0.47	-0.6
4,469,231	-		PfGW456L13_3984	0.47	-0.4
4,469,231	-		PfGW456L13_3984	0.47	-0.5
4,469,231	-				-0.8
4,469,231	-		PfGW456L13_3984	0.47	-1.4
4,469,231	-		PfGW456L13_3984	0.47	-0.9
4,469,231	-		PfGW456L13_3984	0.47	-0.4
4,469,231	-		PfGW456L13_3984	0.47	-0.4
4,469,231	-				+0.2
4,469,231	-		PfGW456L13_3984	0.47	-2.1
4,469,231	-		PfGW456L13_3984	0.47	-1.0
4,469,231	-		PfGW456L13_3984	0.47	-1.8
4,469,231	-		PfGW456L13_3984	0.47	+0.3
4,469,231	-		PfGW456L13_3984	0.47	-1.5
4,469,231	-		PfGW456L13_3984	0.47	-1.8
4,469,231	-		PfGW456L13_3984	0.47	-1.4
4,469,231	-		PfGW456L13_3984	0.47	-1.3
4,469,231	-		PfGW456L13_3984	0.47	-0.8
4,469,318	-		PfGW456L13_3984	0.55	-2.2
4,469,332	+		PfGW456L13_3984	0.56	-1.9
4,469,332	+		PfGW456L13_3984	0.56	-1.7
4,469,332	+		PfGW456L13_3984	0.56	-0.8
4,469,332	+		PfGW456L13_3984	0.56	-1.1
4,469,372	+				-1.1
4,469,372	+		PfGW456L13_3984	0.59	-2.1
4,469,372	+		PfGW456L13_3984	0.59	+0.8
4,469,372	+		PfGW456L13_3984	0.59	+0.9
4,469,372	+		PfGW456L13_3984	0.59	-3.3
4,469,372	+		PfGW456L13_3984	0.59	-1.5
4,469,372	+		PfGW456L13_3984	0.59	-0.7
4,469,372	+		PfGW456L13_3984	0.59	-2.2
4,469,372	+		PfGW456L13_3984	0.59	-2.6
4,469,372	+		PfGW456L13_3984	0.59	-1.5
4,469,372	+		PfGW456L13_3984	0.59	-1.4
4,469,372	+		PfGW456L13_3984	0.59	-1.0
4,469,372	+		PfGW456L13_3984	0.59	-1.1
4,469,372	+		PfGW456L13_3984	0.59	-0.1
4,469,372	+		PfGW456L13_3984	0.59	-1.9
4,469,373	-		PfGW456L13_3984	0.60	-0.8
4,469,373	-		PfGW456L13_3984	0.60	-2.2
4,469,373	-		PfGW456L13_3984	0.60	+0.2
4,469,373	-		PfGW456L13_3984	0.60	+1.0
4,469,373	-		PfGW456L13_3984	0.60	-1.9
4,469,373	-		PfGW456L13_3984	0.60	-0.7
4,469,373	-		PfGW456L13_3984	0.60	-1.1
4,469,399	+		PfGW456L13_3984	0.62	-2.9
4,469,399	+		PfGW456L13_3984	0.62	-2.5
4,469,400	-		PfGW456L13_3984	0.62	-1.6
4,469,400	-		PfGW456L13_3984	0.62	-2.5
4,469,493	-		PfGW456L13_3984	0.70	-3.3
4,469,579	+		PfGW456L13_3984	0.78	+0.4
4,469,579	+		PfGW456L13_3984	0.78	-0.2
4,469,579	+		PfGW456L13_3984	0.78	-1.4
4,469,579	+		PfGW456L13_3984	0.78	-0.1
4,469,579	+		PfGW456L13_3984	0.78	-2.1
4,469,579	+		PfGW456L13_3984	0.78	-2.1
4,469,579	+		PfGW456L13_3984	0.78	-2.5
4,469,579	+		PfGW456L13_3984	0.78	-2.2
4,469,579	+		PfGW456L13_3984	0.78	-1.8
4,469,579	+		PfGW456L13_3984	0.78	+0.0
4,469,579	+		PfGW456L13_3984	0.78	-2.7
4,469,579	+		PfGW456L13_3984	0.78	+0.6
4,469,579	+		PfGW456L13_3984	0.78	-1.0
4,469,579	+		PfGW456L13_3984	0.78	-2.5
4,469,579	+		PfGW456L13_3984	0.78	-0.9
4,469,579	+		PfGW456L13_3984	0.78	-1.9
4,469,579	+		PfGW456L13_3984	0.78	-1.7
4,469,580	-		PfGW456L13_3984	0.78	-1.7
4,469,580	-		PfGW456L13_3984	0.78	-1.8
4,469,580	-		PfGW456L13_3984	0.78	+0.6
4,469,580	-		PfGW456L13_3984	0.78	+0.1
4,469,580	-		PfGW456L13_3984	0.78	-2.5
4,469,580	-		PfGW456L13_3984	0.78	-1.1
4,469,580	-		PfGW456L13_3984	0.78	-1.3
4,469,580	-		PfGW456L13_3984	0.78	-1.5
4,469,580	-		PfGW456L13_3984	0.78	-1.2
4,469,580	-		PfGW456L13_3984	0.78	-1.0
4,469,580	-		PfGW456L13_3984	0.78	-3.9
4,469,580	-		PfGW456L13_3984	0.78	-2.4
4,469,580	-		PfGW456L13_3984	0.78	+0.0
4,469,580	-		PfGW456L13_3984	0.78	+0.9
4,469,580	-		PfGW456L13_3984	0.78	-0.0
4,469,580	-		PfGW456L13_3984	0.78	+0.4
4,469,580	-		PfGW456L13_3984	0.78	+0.5
4,469,580	-		PfGW456L13_3984	0.78	-0.1
4,469,580	-		PfGW456L13_3984	0.78	-0.8
4,469,580	-		PfGW456L13_3984	0.78	+0.5
4,469,580	-		PfGW456L13_3984	0.78	-1.8
4,469,582	+		PfGW456L13_3984	0.78	+1.8
4,469,582	+		PfGW456L13_3984	0.78	-1.8
4,469,582	+		PfGW456L13_3984	0.78	-3.0
4,469,582	+		PfGW456L13_3984	0.78	-1.6
4,469,582	+		PfGW456L13_3984	0.78	-0.6
4,469,582	+		PfGW456L13_3984	0.78	-1.4
4,469,582	+		PfGW456L13_3984	0.78	-1.1
4,469,582	+		PfGW456L13_3984	0.78	-0.6
4,469,582	+		PfGW456L13_3984	0.78	-1.7
4,469,582	+		PfGW456L13_3984	0.78	-0.6
4,469,582	+		PfGW456L13_3984	0.78	-0.4
4,469,582	+		PfGW456L13_3984	0.78	-0.9
4,469,583	-		PfGW456L13_3984	0.78	-3.7
4,469,583	-		PfGW456L13_3984	0.78	-1.5
4,469,583	-		PfGW456L13_3984	0.78	-0.6
4,469,583	-		PfGW456L13_3984	0.78	-1.8
4,469,583	-		PfGW456L13_3984	0.78	-2.7
4,469,583	-		PfGW456L13_3984	0.78	-0.5
4,469,583	-		PfGW456L13_3984	0.78	-1.9
4,469,633	-		PfGW456L13_3984	0.82	-1.4
4,469,644	+		PfGW456L13_3984	0.83	-0.2
4,469,644	+		PfGW456L13_3984	0.83	-1.5
4,469,663	+		PfGW456L13_3984	0.85	-0.8
4,469,663	+		PfGW456L13_3984	0.85	-0.0
4,469,663	+		PfGW456L13_3984	0.85	-1.5
4,469,663	+		PfGW456L13_3984	0.85	-1.0
4,469,663	+		PfGW456L13_3984	0.85	-1.4
4,469,663	+		PfGW456L13_3984	0.85	-1.3
4,469,664	-		PfGW456L13_3984	0.85	-1.2
4,469,664	-		PfGW456L13_3984	0.85	-0.0
4,469,664	-		PfGW456L13_3984	0.85	-2.6
4,469,668	-		PfGW456L13_3984	0.85	-0.6
4,469,728	+				-2.2
4,469,728	+				-1.3
4,469,728	+				-1.4
4,469,728	+				-0.3
4,469,728	+				-0.6
4,469,728	+				-0.8
4,469,729	-				-2.4
4,469,729	-				-1.6
4,469,729	-				-1.3
4,469,729	-				-2.1
4,469,800	+				-2.6
4,469,815	-				+0.3
4,469,904	+				-1.9
4,469,904	+				-0.3
4,469,905	-				+0.0
4,469,905	-				-0.8
4,469,907	-				+1.0
4,469,919	-				-0.7
4,469,922	+				-0.9
4,469,932	-				-0.2
4,469,948	-				+0.0
4,469,948	-				+0.1
4,470,073	+				-0.5
4,470,074	-				-1.1
4,470,160	-				-3.2
4,470,179	+				-0.6
4,470,419	+		PfGW456L13_3985	0.12	-1.6
4,470,425	-		PfGW456L13_3985	0.13	-2.8
4,470,437	+		PfGW456L13_3985	0.13	-0.9
4,470,437	+		PfGW456L13_3985	0.13	+0.3
4,470,454	+		PfGW456L13_3985	0.14	-3.0
4,470,454	+		PfGW456L13_3985	0.14	-2.6
4,470,455	-		PfGW456L13_3985	0.14	-1.4
4,470,614	+		PfGW456L13_3985	0.24	-0.2
4,470,615	-		PfGW456L13_3985	0.24	-0.9
4,470,615	-		PfGW456L13_3985	0.24	-0.6
4,470,619	+		PfGW456L13_3985	0.24	-2.6
4,470,620	-		PfGW456L13_3985	0.25	-1.0
4,470,770	-		PfGW456L13_3985	0.34	-0.4
4,470,793	+		PfGW456L13_3985	0.35	-1.5
4,470,793	+		PfGW456L13_3985	0.35	-1.1
4,470,793	+		PfGW456L13_3985	0.35	-0.5
4,470,794	-		PfGW456L13_3985	0.35	-0.3
4,470,794	-		PfGW456L13_3985	0.35	-1.1
4,470,794	-		PfGW456L13_3985	0.35	-0.5
4,470,794	-		PfGW456L13_3985	0.35	-1.9