Experiment: L-Malic (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PfGW456L13_234 and PfGW456L13_235 overlap by 25 nucleotides PfGW456L13_235 and PfGW456L13_236 overlap by 23 nucleotides PfGW456L13_236 and PfGW456L13_237 are separated by 9 nucleotides PfGW456L13_237 and PfGW456L13_238 overlap by 4 nucleotides PfGW456L13_238 and PfGW456L13_239 overlap by 4 nucleotides
PfGW456L13_234 - 3-oxoacyl-[ACP] synthase, at 279,822 to 280,541
_234
PfGW456L13_235 - FIG018329: 1-acyl-sn-glycerol-3-phosphate acyltransferase, at 280,517 to 281,329
_235
PfGW456L13_236 - Acyl carrier protein (ACP1), at 281,307 to 281,582
_236
PfGW456L13_237 - Acyl carrier protein, at 281,592 to 281,846
_237
PfGW456L13_238 - FIG017861: hypothetical protein, at 281,843 to 282,388
_238
PfGW456L13_239 - FIGfam138462: Acyl-CoA synthetase, AMP-(fatty) acid ligase / (3R)-hydroxymyristoyl-[ACP] dehydratase (EC 4.2.1.-), at 282,385 to 284,064
_239
Position (kb) 281
282 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2 at 280.356 kb on + strand, within PfGW456L13_234 at 280.357 kb on - strand, within PfGW456L13_234 at 280.357 kb on - strand, within PfGW456L13_234 at 280.516 kb on + strand at 280.517 kb on - strand at 280.517 kb on - strand at 280.562 kb on + strand at 280.562 kb on + strand at 280.562 kb on + strand at 280.562 kb on + strand at 280.563 kb on - strand at 280.563 kb on - strand at 280.566 kb on - strand at 280.647 kb on + strand, within PfGW456L13_235 at 280.648 kb on - strand, within PfGW456L13_235 at 280.760 kb on + strand, within PfGW456L13_235 at 280.760 kb on + strand, within PfGW456L13_235 at 280.760 kb on + strand, within PfGW456L13_235 at 280.760 kb on + strand, within PfGW456L13_235 at 280.760 kb on + strand, within PfGW456L13_235 at 280.760 kb on + strand, within PfGW456L13_235 at 280.761 kb on - strand, within PfGW456L13_235 at 280.761 kb on - strand, within PfGW456L13_235 at 280.761 kb on - strand, within PfGW456L13_235 at 280.761 kb on - strand, within PfGW456L13_235 at 280.761 kb on - strand, within PfGW456L13_235 at 280.761 kb on - strand, within PfGW456L13_235 at 280.761 kb on - strand, within PfGW456L13_235 at 280.762 kb on + strand, within PfGW456L13_235 at 280.762 kb on + strand, within PfGW456L13_235 at 280.762 kb on + strand, within PfGW456L13_235 at 280.763 kb on - strand, within PfGW456L13_235 at 280.763 kb on - strand, within PfGW456L13_235 at 280.763 kb on - strand, within PfGW456L13_235 at 280.763 kb on - strand, within PfGW456L13_235 at 280.763 kb on - strand, within PfGW456L13_235 at 280.763 kb on - strand, within PfGW456L13_235 at 280.934 kb on + strand, within PfGW456L13_235 at 280.934 kb on + strand, within PfGW456L13_235 at 280.934 kb on + strand, within PfGW456L13_235 at 280.934 kb on + strand, within PfGW456L13_235 at 280.934 kb on + strand, within PfGW456L13_235 at 280.935 kb on - strand, within PfGW456L13_235 at 280.935 kb on - strand, within PfGW456L13_235 at 281.206 kb on + strand, within PfGW456L13_235 at 281.207 kb on - strand, within PfGW456L13_235 at 281.208 kb on + strand, within PfGW456L13_235 at 281.208 kb on + strand, within PfGW456L13_235 at 281.209 kb on - strand, within PfGW456L13_235 at 281.270 kb on + strand at 281.282 kb on + strand at 281.282 kb on + strand at 281.282 kb on + strand at 281.282 kb on + strand at 281.282 kb on + strand at 281.283 kb on - strand at 281.283 kb on - strand at 281.283 kb on - strand at 281.283 kb on - strand at 281.283 kb on - strand at 281.484 kb on + strand, within PfGW456L13_236 at 281.485 kb on - strand, within PfGW456L13_236 at 281.535 kb on - strand, within PfGW456L13_236 at 281.689 kb on - strand, within PfGW456L13_237 at 281.877 kb on + strand at 281.877 kb on + strand at 281.878 kb on - strand at 281.878 kb on - strand at 281.889 kb on - strand at 281.903 kb on + strand, within PfGW456L13_238 at 281.903 kb on + strand, within PfGW456L13_238 at 282.201 kb on - strand, within PfGW456L13_238 at 282.201 kb on - strand, within PfGW456L13_238 at 282.201 kb on - strand, within PfGW456L13_238 at 282.201 kb on - strand, within PfGW456L13_238 at 282.202 kb on + strand, within PfGW456L13_238 at 282.303 kb on - strand, within PfGW456L13_238 at 282.303 kb on - strand, within PfGW456L13_238 at 282.330 kb on + strand, within PfGW456L13_238 at 282.330 kb on + strand, within PfGW456L13_238 at 282.331 kb on - strand, within PfGW456L13_238 at 282.360 kb on + strand at 282.360 kb on + strand at 282.361 kb on - strand at 282.366 kb on + strand at 282.372 kb on + strand at 282.373 kb on - strand at 282.396 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Malic (C) remove 280,356 + PfGW456L13_234 0.74 +0.5 280,357 - PfGW456L13_234 0.74 -1.6 280,357 - PfGW456L13_234 0.74 +0.3 280,516 + +1.1 280,517 - +1.4 280,517 - +0.8 280,562 + -0.3 280,562 + -0.1 280,562 + +0.8 280,562 + +0.2 280,563 - +0.5 280,563 - -2.6 280,566 - +0.9 280,647 + PfGW456L13_235 0.16 -0.6 280,648 - PfGW456L13_235 0.16 +0.3 280,760 + PfGW456L13_235 0.30 +0.4 280,760 + PfGW456L13_235 0.30 +0.7 280,760 + PfGW456L13_235 0.30 +0.4 280,760 + PfGW456L13_235 0.30 -1.2 280,760 + PfGW456L13_235 0.30 +1.2 280,760 + PfGW456L13_235 0.30 +0.1 280,761 - PfGW456L13_235 0.30 -1.0 280,761 - PfGW456L13_235 0.30 -0.5 280,761 - PfGW456L13_235 0.30 -0.2 280,761 - PfGW456L13_235 0.30 +0.3 280,761 - PfGW456L13_235 0.30 +0.1 280,761 - PfGW456L13_235 0.30 -1.6 280,761 - PfGW456L13_235 0.30 -1.7 280,762 + PfGW456L13_235 0.30 +0.0 280,762 + PfGW456L13_235 0.30 -1.5 280,762 + PfGW456L13_235 0.30 +0.5 280,763 - PfGW456L13_235 0.30 -2.7 280,763 - PfGW456L13_235 0.30 +0.5 280,763 - PfGW456L13_235 0.30 +1.0 280,763 - PfGW456L13_235 0.30 -0.7 280,763 - PfGW456L13_235 0.30 +0.3 280,763 - PfGW456L13_235 0.30 -0.0 280,934 + PfGW456L13_235 0.51 -1.4 280,934 + PfGW456L13_235 0.51 +0.4 280,934 + PfGW456L13_235 0.51 +0.9 280,934 + PfGW456L13_235 0.51 -1.0 280,934 + PfGW456L13_235 0.51 -0.2 280,935 - PfGW456L13_235 0.51 +0.9 280,935 - PfGW456L13_235 0.51 +1.0 281,206 + PfGW456L13_235 0.85 -1.7 281,207 - PfGW456L13_235 0.85 +1.1 281,208 + PfGW456L13_235 0.85 -0.6 281,208 + PfGW456L13_235 0.85 -2.1 281,209 - PfGW456L13_235 0.85 -0.2 281,270 + +0.6 281,282 + -0.0 281,282 + +0.5 281,282 + -1.1 281,282 + -0.3 281,282 + +1.4 281,283 - +0.2 281,283 - +1.7 281,283 - +1.0 281,283 - -0.1 281,283 - +0.9 281,484 + PfGW456L13_236 0.64 +0.6 281,485 - PfGW456L13_236 0.64 -4.0 281,535 - PfGW456L13_236 0.83 -2.7 281,689 - PfGW456L13_237 0.38 -1.3 281,877 + -0.1 281,877 + +0.3 281,878 - +0.9 281,878 - -3.6 281,889 - -2.9 281,903 + PfGW456L13_238 0.11 +0.2 281,903 + PfGW456L13_238 0.11 +0.4 282,201 - PfGW456L13_238 0.66 -0.0 282,201 - PfGW456L13_238 0.66 +0.4 282,201 - PfGW456L13_238 0.66 -0.5 282,201 - PfGW456L13_238 0.66 +0.3 282,202 + PfGW456L13_238 0.66 -0.6 282,303 - PfGW456L13_238 0.84 +0.9 282,303 - PfGW456L13_238 0.84 -0.0 282,330 + PfGW456L13_238 0.89 -1.5 282,330 + PfGW456L13_238 0.89 +0.0 282,331 - PfGW456L13_238 0.89 +0.7 282,360 + +0.4 282,360 + +0.6 282,361 - +1.1 282,366 + -1.7 282,372 + +1.2 282,373 - +0.8 282,396 - +2.7
Or see this region's nucleotide sequence