Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_4310

Experiment: m.b. D-Cycloserine 0.016 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. D-Cycloserine 0.016 mg/ml
5,145,394	+				+0.0
5,145,399	-				-0.0
5,145,418	+				+0.2
5,145,418	+				+0.1
5,145,418	+				+0.8
5,145,419	-				-0.3
5,145,419	-				+1.4
5,145,436	-				+0.0
5,145,463	+				-0.4
5,145,465	+				-0.6
5,145,482	+				+1.4
5,145,499	+				-1.2
5,145,499	+				+0.8
5,145,499	+				-0.2
5,145,500	-				+1.7
5,145,560	+				-0.6
5,145,560	+				+0.2
5,145,560	+				+0.1
5,145,561	-				-0.5
5,145,695	+		Echvi_4307	0.29	+1.7
5,145,696	-		Echvi_4307	0.30	+0.2
5,145,696	-		Echvi_4307	0.30	+1.7
5,145,698	-		Echvi_4307	0.30	-0.9
5,145,698	-		Echvi_4307	0.30	+0.1
5,145,701	+		Echvi_4307	0.31	+0.5
5,145,784	-		Echvi_4307	0.52	+0.1
5,145,805	-		Echvi_4307	0.57	-0.9
5,145,821	+		Echvi_4307	0.61	-0.5
5,145,835	+		Echvi_4307	0.64	-0.7
5,145,836	-		Echvi_4307	0.65	-1.5
5,145,889	-		Echvi_4307	0.78	+0.7
5,145,966	+				-1.2
5,145,966	+				-0.7
5,145,966	+				+1.7
5,145,967	-				-0.7
5,145,967	-				+0.1
5,145,967	-				+0.2
5,145,967	-				+0.3
5,145,975	+				+1.0
5,145,976	-				-0.2
5,145,987	+		Echvi_4308	0.11	-1.0
5,145,987	+		Echvi_4308	0.11	+0.1
5,146,075	+		Echvi_4308	0.58	-0.3
5,146,075	+		Echvi_4308	0.58	-0.2
5,146,141	-				-0.7
5,146,150	+				+0.3
5,146,151	-				+1.1
5,146,151	-				+0.4
5,146,151	-				+0.4
5,146,154	+				-0.2
5,146,154	+				+0.0
5,146,172	+				+0.2
5,146,172	+				-0.1
5,146,173	-		Echvi_4309	0.10	-0.1
5,146,173	-		Echvi_4309	0.10	+1.3
5,146,251	+		Echvi_4309	0.50	+0.3
5,146,252	-		Echvi_4309	0.51	-0.4
5,146,253	+		Echvi_4309	0.51	-1.5
5,146,253	+		Echvi_4309	0.51	-0.8
5,146,253	+		Echvi_4309	0.51	+1.1
5,146,253	+		Echvi_4309	0.51	+1.0
5,146,254	-		Echvi_4309	0.52	-1.1
5,146,254	-		Echvi_4309	0.52	-0.5
5,146,254	-		Echvi_4309	0.52	-0.2
5,146,264	+		Echvi_4309	0.57	-0.3
5,146,265	-		Echvi_4309	0.57	+1.7
5,146,265	-		Echvi_4309	0.57	+0.7
5,146,265	-		Echvi_4309	0.57	-1.0
5,146,299	+		Echvi_4309	0.75	-0.9
5,146,361	-				+1.7
5,146,406	+				+0.1
5,146,406	+				+0.0
5,146,406	+				-0.8
5,146,406	+				-0.2
5,146,406	+				+0.9
5,146,407	-				+0.2
5,146,407	-				+0.3
5,146,410	-				+1.0
5,146,445	+				+0.7
5,146,445	+				-0.9
5,146,446	-				-0.8
5,146,515	-				-0.3
5,146,559	-		Echvi_4310	0.11	+1.2
5,146,559	-		Echvi_4310	0.11	+0.4
5,146,605	+		Echvi_4310	0.14	-0.2
5,146,606	-		Echvi_4310	0.14	-0.3
5,146,671	+		Echvi_4310	0.18	-0.5
5,146,675	+		Echvi_4310	0.18	-0.9
5,146,675	+		Echvi_4310	0.18	-0.1
5,146,676	-		Echvi_4310	0.18	+0.8
5,146,676	-		Echvi_4310	0.18	+0.4
5,146,677	+		Echvi_4310	0.18	-1.7
5,146,677	+		Echvi_4310	0.18	+0.4
5,146,678	-		Echvi_4310	0.18	+0.3
5,146,686	+		Echvi_4310	0.19	-0.1
5,146,686	+		Echvi_4310	0.19	+0.8
5,146,686	+		Echvi_4310	0.19	-1.0
5,146,686	+		Echvi_4310	0.19	+0.5
5,146,687	-		Echvi_4310	0.19	-0.4
5,146,777	+		Echvi_4310	0.25	+0.2
5,146,777	+		Echvi_4310	0.25	+0.1
5,146,777	+		Echvi_4310	0.25	+0.9
5,146,778	-		Echvi_4310	0.25	-0.0
5,146,778	-		Echvi_4310	0.25	-1.2
5,146,778	-		Echvi_4310	0.25	+2.0
5,146,778	-		Echvi_4310	0.25	+0.4
5,146,850	+		Echvi_4310	0.29	+0.3
5,146,851	-		Echvi_4310	0.29	-0.2
5,146,852	+		Echvi_4310	0.29	+1.3
5,146,852	+		Echvi_4310	0.29	+0.2
5,146,852	+		Echvi_4310	0.29	+1.0
5,146,853	-		Echvi_4310	0.29	+0.0
5,146,894	-		Echvi_4310	0.32	-0.2
5,146,894	-		Echvi_4310	0.32	+0.5
5,146,960	+		Echvi_4310	0.36	+2.7
5,146,960	+		Echvi_4310	0.36	+1.0
5,146,961	-		Echvi_4310	0.36	-0.1
5,146,961	-		Echvi_4310	0.36	-1.0
5,146,961	-		Echvi_4310	0.36	-0.1
5,146,962	+		Echvi_4310	0.36	+1.4
5,146,963	-		Echvi_4310	0.36	+0.3
5,146,963	-		Echvi_4310	0.36	-0.2
5,146,963	-		Echvi_4310	0.36	-0.6
5,147,020	+		Echvi_4310	0.40	-0.3
5,147,021	-		Echvi_4310	0.40	-2.8
5,147,063	+		Echvi_4310	0.42	-1.1
5,147,063	+		Echvi_4310	0.42	+1.0
5,147,064	-		Echvi_4310	0.42	-0.9
5,147,064	-		Echvi_4310	0.42	-0.5
5,147,065	+		Echvi_4310	0.42	-0.8
5,147,073	-		Echvi_4310	0.43	+0.6
5,147,073	-		Echvi_4310	0.43	+0.0
5,147,149	+		Echvi_4310	0.48	-0.6
5,147,149	+		Echvi_4310	0.48	-1.7
5,147,150	-		Echvi_4310	0.48	-0.1
5,147,213	+		Echvi_4310	0.52	-0.6
5,147,234	-		Echvi_4310	0.53	-0.3
5,147,250	+		Echvi_4310	0.54	+0.2
5,147,311	+		Echvi_4310	0.58	+0.1
5,147,513	-		Echvi_4310	0.70	-0.8
5,147,555	-		Echvi_4310	0.73	-1.2
5,147,555	-		Echvi_4310	0.73	-0.1
5,147,631	+		Echvi_4310	0.78	+0.1
5,147,632	-		Echvi_4310	0.78	-0.7
5,147,632	-		Echvi_4310	0.78	+0.2
5,147,632	-		Echvi_4310	0.78	+1.8
5,147,632	-		Echvi_4310	0.78	-1.1
5,147,632	-		Echvi_4310	0.78	+0.3
5,147,660	+		Echvi_4310	0.79	+0.2
5,147,692	-		Echvi_4310	0.81	-0.1
5,147,735	+		Echvi_4310	0.84	+0.1
5,147,736	-		Echvi_4310	0.84	-0.3
5,147,797	-		Echvi_4310	0.88	-0.5
5,147,888	+				+0.4
5,147,888	+				+0.8
5,147,889	-				+1.1
5,147,940	-				-1.6
5,148,018	+				-1.3
5,148,019	-				-0.0
5,148,020	+				-0.1
5,148,021	-				-0.6
5,148,021	-				+0.2
5,148,033	+				-0.8
5,148,033	+				+0.5
5,148,034	-				-0.0
5,148,077	-				+0.2
5,148,175	-		Echvi_4311	0.14	+0.9
5,148,455	+		Echvi_4311	0.38	+0.1
5,148,460	+		Echvi_4311	0.38	+0.7
5,148,460	+		Echvi_4311	0.38	+0.7
5,148,460	+		Echvi_4311	0.38	-0.2
5,148,500	-		Echvi_4311	0.42	-1.1
5,148,501	+		Echvi_4311	0.42	-0.2
5,148,501	+		Echvi_4311	0.42	-0.7
5,148,502	-		Echvi_4311	0.42	-0.7
5,148,502	-		Echvi_4311	0.42	-0.1
5,148,502	-		Echvi_4311	0.42	-0.1
5,148,759	+		Echvi_4311	0.64	-0.8
5,148,760	-		Echvi_4311	0.64	-1.5
5,148,763	+		Echvi_4311	0.64	-1.1
5,148,797	-		Echvi_4311	0.67	+0.8
5,148,866	+		Echvi_4311	0.73	+0.1
5,148,866	+		Echvi_4311	0.73	-0.2
5,148,867	-		Echvi_4311	0.73	-1.7
5,148,867	-		Echvi_4311	0.73	-0.6
5,148,869	+		Echvi_4311	0.73	-0.1
5,148,869	+		Echvi_4311	0.73	-0.9
5,148,961	+		Echvi_4311	0.81	-2.0