Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_4193

Experiment: m.b. D-Cycloserine 0.016 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. D-Cycloserine 0.016 mg/ml
5,007,053	+		Echvi_4192	0.40	-0.0
5,007,060	+		Echvi_4192	0.40	-1.7
5,007,060	+		Echvi_4192	0.40	+0.4
5,007,061	-		Echvi_4192	0.40	-0.1
5,007,061	-		Echvi_4192	0.40	+0.7
5,007,061	-		Echvi_4192	0.40	+1.7
5,007,061	-		Echvi_4192	0.40	-1.3
5,007,061	-		Echvi_4192	0.40	-0.1
5,007,061	-		Echvi_4192	0.40	-0.2
5,007,061	-		Echvi_4192	0.40	-0.2
5,007,061	-		Echvi_4192	0.40	-0.4
5,007,061	-		Echvi_4192	0.40	-0.3
5,007,061	-		Echvi_4192	0.40	-1.3
5,007,062	+		Echvi_4192	0.40	-0.1
5,007,145	+		Echvi_4192	0.46	-0.0
5,007,148	+		Echvi_4192	0.46	-0.4
5,007,149	-		Echvi_4192	0.46	+0.2
5,007,173	+		Echvi_4192	0.47	-0.8
5,007,186	-		Echvi_4192	0.48	-0.6
5,007,186	-		Echvi_4192	0.48	-1.2
5,007,186	-		Echvi_4192	0.48	-0.4
5,007,355	+		Echvi_4192	0.59	+0.3
5,007,356	-		Echvi_4192	0.59	-0.3
5,007,371	+		Echvi_4192	0.60	-0.9
5,007,371	+		Echvi_4192	0.60	-0.7
5,007,371	+		Echvi_4192	0.60	-0.2
5,007,372	-		Echvi_4192	0.60	+0.8
5,007,372	-		Echvi_4192	0.60	+0.9
5,007,372	-		Echvi_4192	0.60	+0.8
5,007,375	+		Echvi_4192	0.61	+0.5
5,007,375	+		Echvi_4192	0.61	+0.3
5,007,375	+		Echvi_4192	0.61	-0.3
5,007,375	+		Echvi_4192	0.61	-0.5
5,007,375	+		Echvi_4192	0.61	-2.0
5,007,375	+		Echvi_4192	0.61	+0.1
5,007,375	+		Echvi_4192	0.61	-0.0
5,007,375	+		Echvi_4192	0.61	-0.4
5,007,375	+		Echvi_4192	0.61	-0.1
5,007,375	+		Echvi_4192	0.61	-0.9
5,007,375	+		Echvi_4192	0.61	+0.5
5,007,375	+		Echvi_4192	0.61	+1.7
5,007,375	+		Echvi_4192	0.61	+0.2
5,007,375	+		Echvi_4192	0.61	+0.1
5,007,375	+		Echvi_4192	0.61	-0.6
5,007,376	-		Echvi_4192	0.61	+0.4
5,007,376	-		Echvi_4192	0.61	-0.7
5,007,376	-		Echvi_4192	0.61	+0.6
5,007,376	-		Echvi_4192	0.61	-0.9
5,007,376	-		Echvi_4192	0.61	-0.1
5,007,376	-		Echvi_4192	0.61	-1.0
5,007,376	-		Echvi_4192	0.61	+0.4
5,007,380	-		Echvi_4192	0.61	+0.6
5,007,404	+		Echvi_4192	0.63	+0.2
5,007,404	+		Echvi_4192	0.63	-0.7
5,007,405	-		Echvi_4192	0.63	-0.9
5,007,405	-		Echvi_4192	0.63	+0.2
5,007,410	+		Echvi_4192	0.63	+0.3
5,007,410	+		Echvi_4192	0.63	+0.4
5,007,410	+		Echvi_4192	0.63	-1.3
5,007,410	+		Echvi_4192	0.63	+0.4
5,007,410	+		Echvi_4192	0.63	+0.1
5,007,411	-		Echvi_4192	0.63	+0.2
5,007,411	-		Echvi_4192	0.63	-1.2
5,007,411	-		Echvi_4192	0.63	-0.3
5,007,496	-		Echvi_4192	0.69	-0.0
5,007,518	+		Echvi_4192	0.70	-0.6
5,007,518	+		Echvi_4192	0.70	-0.1
5,007,518	+		Echvi_4192	0.70	-1.0
5,007,518	+		Echvi_4192	0.70	+0.8
5,007,519	-		Echvi_4192	0.70	+0.0
5,007,519	-		Echvi_4192	0.70	-1.6
5,007,534	-		Echvi_4192	0.71	-0.9
5,007,534	-		Echvi_4192	0.71	-0.3
5,007,545	+		Echvi_4192	0.72	+0.3
5,007,546	-		Echvi_4192	0.72	-1.4
5,007,546	-		Echvi_4192	0.72	-1.3
5,007,581	-		Echvi_4192	0.74	+0.3
5,007,670	-		Echvi_4192	0.80	+1.7
5,007,670	-		Echvi_4192	0.80	+0.7
5,007,975	-				+1.2
5,007,975	-				+0.2
5,007,975	-				-0.7
5,008,009	+				+0.1
5,008,078	+		Echvi_4193	0.12	-1.7
5,008,192	+		Echvi_4193	0.50	-0.6
5,008,192	+		Echvi_4193	0.50	-1.7
5,008,193	-		Echvi_4193	0.51	-0.4
5,008,193	-		Echvi_4193	0.51	-0.3
5,008,193	-		Echvi_4193	0.51	-0.6
5,008,193	-		Echvi_4193	0.51	+0.2
5,008,340	-				+0.7
5,008,340	-				-0.4
5,008,340	-				-0.4
5,008,340	-				-0.3
5,008,357	+				-0.8
5,008,357	+				-0.1
5,008,358	-				-0.9
5,008,504	+		Echvi_4194	0.49	-0.4
5,008,505	-		Echvi_4194	0.50	-0.6
5,008,508	-		Echvi_4194	0.51	-0.2
5,008,508	-		Echvi_4194	0.51	-1.0
5,008,509	+		Echvi_4194	0.51	-0.3
5,008,510	-		Echvi_4194	0.52	-0.5
5,008,510	-		Echvi_4194	0.52	+0.0
5,008,740	+				-0.1
5,008,812	-				-0.9
5,009,203	-		Echvi_4195	0.25	-0.3
5,009,203	-		Echvi_4195	0.25	+0.1
5,009,203	-		Echvi_4195	0.25	-0.3
5,009,231	+		Echvi_4195	0.27	+0.8
5,009,231	+		Echvi_4195	0.27	-2.1
5,009,231	+		Echvi_4195	0.27	+1.5
5,009,232	-		Echvi_4195	0.27	+0.4
5,009,232	-		Echvi_4195	0.27	+0.3
5,009,232	-		Echvi_4195	0.27	-0.4
5,009,261	+		Echvi_4195	0.29	-0.0
5,009,261	+		Echvi_4195	0.29	+0.1
5,009,261	+		Echvi_4195	0.29	-0.6
5,009,262	-		Echvi_4195	0.29	-2.9
5,009,265	+		Echvi_4195	0.29	-0.4
5,009,265	+		Echvi_4195	0.29	-0.3
5,009,265	+		Echvi_4195	0.29	+0.7
5,009,265	+		Echvi_4195	0.29	+0.2
5,009,266	-		Echvi_4195	0.29	+0.3
5,009,270	+		Echvi_4195	0.30	+0.8
5,009,271	-		Echvi_4195	0.30	+0.6
5,009,316	+		Echvi_4195	0.33	+0.1
5,009,316	+		Echvi_4195	0.33	-0.1