Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_1088

Experiment: m.b. D-Cycloserine 0.016 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. D-Cycloserine 0.016 mg/ml
1,248,030	-				-0.7
1,248,034	-				-1.3
1,248,034	-				+1.5
1,248,159	+				-0.3
1,248,160	-				+0.8
1,248,160	-				+0.9
1,248,163	+				+0.5
1,248,163	+				-0.3
1,248,163	+				-1.9
1,248,163	+				+0.7
1,248,163	+				-1.0
1,248,163	+				-1.7
1,248,163	+				+0.9
1,248,164	-				-0.3
1,248,182	+				+0.8
1,248,186	+				+0.0
1,248,187	-				+0.9
1,248,190	+				+1.9
1,248,190	+				-1.6
1,248,190	+				-0.2
1,248,190	+				-0.3
1,248,191	-				-0.3
1,248,191	-				-0.8
1,248,192	+				+1.1
1,248,193	-				+1.1
1,248,196	-				-0.1
1,248,213	+				-2.1
1,248,214	-				-0.8
1,248,214	-				+0.8
1,248,214	-				+0.1
1,248,241	+				-0.5
1,248,306	+				+0.9
1,248,319	+				-0.4
1,248,330	+				+0.4
1,248,331	-				+1.0
1,248,344	-				-0.4
1,248,476	+		Echvi_1087	0.21	-0.7
1,248,476	+		Echvi_1087	0.21	+0.1
1,248,476	+		Echvi_1087	0.21	-0.2
1,248,477	-		Echvi_1087	0.21	+0.5
1,248,576	+		Echvi_1087	0.38	+0.1
1,248,665	+		Echvi_1087	0.53	-0.9
1,248,666	-		Echvi_1087	0.53	+0.4
1,248,666	-		Echvi_1087	0.53	-0.9
1,248,689	+		Echvi_1087	0.57	-0.1
1,248,690	-		Echvi_1087	0.57	+1.6
1,248,693	+		Echvi_1087	0.58	-0.4
1,248,695	+		Echvi_1087	0.58	-0.5
1,248,731	-		Echvi_1087	0.64	-0.6
1,248,739	+		Echvi_1087	0.66	-0.3
1,248,764	+		Echvi_1087	0.70	-0.1
1,248,764	+		Echvi_1087	0.70	+0.5
1,248,764	+		Echvi_1087	0.70	+0.3
1,248,764	+		Echvi_1087	0.70	-0.4
1,248,764	+		Echvi_1087	0.70	-0.2
1,248,764	+		Echvi_1087	0.70	+0.7
1,248,765	-		Echvi_1087	0.70	-0.7
1,248,765	-		Echvi_1087	0.70	+0.1
1,248,765	-		Echvi_1087	0.70	+1.9
1,248,765	-		Echvi_1087	0.70	-0.3
1,248,784	-		Echvi_1087	0.74	-1.7
1,248,818	+		Echvi_1087	0.79	+0.7
1,248,818	+		Echvi_1087	0.79	-1.6
1,248,819	-		Echvi_1087	0.79	+0.2
1,248,849	+		Echvi_1087	0.85	-0.2
1,248,849	+		Echvi_1087	0.85	-0.2
1,248,896	+				-1.0
1,248,896	+				-0.0
1,248,896	+				+0.9
1,248,897	-				-0.3
1,248,897	-				-0.6
1,248,901	+				+1.1
1,248,907	-				-1.0
1,248,939	-				+0.2
1,248,944	+				+0.4
1,248,945	-				-1.1
1,248,947	+				+0.7
1,248,947	+				-0.1
1,248,948	-				+1.1
1,248,953	+				-0.4
1,248,953	+				-0.2
1,248,954	-				-1.9
1,248,954	-				-0.8
1,248,986	+				+0.2
1,248,986	+				+0.0
1,248,987	-				+1.1
1,248,987	-				-0.4
1,248,987	-				-1.8
1,249,072	-		Echvi_1088	0.12	+0.5
1,249,081	-		Echvi_1088	0.14	-3.0
1,249,139	-		Echvi_1088	0.28	+0.6
1,249,155	+		Echvi_1088	0.32	-0.1
1,249,156	-		Echvi_1088	0.32	-0.2
1,249,162	+		Echvi_1088	0.34	+0.6
1,249,199	+		Echvi_1088	0.43	+1.7
1,249,225	-		Echvi_1088	0.49	+1.0
1,249,239	+		Echvi_1088	0.52	-0.3
1,249,240	-		Echvi_1088	0.53	-0.1
1,249,242	+		Echvi_1088	0.53	+0.1
1,249,271	+		Echvi_1088	0.60	+0.8
1,249,290	+		Echvi_1088	0.65	+1.0
1,249,291	-		Echvi_1088	0.65	+0.5
1,249,296	+		Echvi_1088	0.66	+1.9
1,249,297	-		Echvi_1088	0.66	+0.5
1,249,297	-		Echvi_1088	0.66	-0.1
1,249,297	-		Echvi_1088	0.66	-0.6
1,249,298	+		Echvi_1088	0.67	+0.4
1,249,402	+				-0.2
1,249,403	-				+1.5
1,249,436	-				+0.6
1,249,556	+				-0.6
1,249,573	-				-0.1
1,249,576	+				-0.2
1,249,577	-				-0.2
1,249,577	-				-0.2
1,249,586	-				+0.4
1,249,607	-				-1.2
1,249,612	+				+0.5
1,249,748	-		Echvi_1089	0.17	+1.1
1,249,761	-		Echvi_1089	0.17	+0.0
1,249,777	+		Echvi_1089	0.18	-0.6
1,249,804	+		Echvi_1089	0.20	-1.0
1,249,804	+		Echvi_1089	0.20	-0.1
1,249,804	+		Echvi_1089	0.20	-0.6
1,249,828	+		Echvi_1089	0.21	+0.2
1,249,835	-		Echvi_1089	0.22	-0.1
1,249,846	+		Echvi_1089	0.22	+0.3
1,249,846	+		Echvi_1089	0.22	-2.0
1,249,846	+		Echvi_1089	0.22	-0.8
1,249,846	+		Echvi_1089	0.22	-0.2
1,249,846	+		Echvi_1089	0.22	+0.4
1,249,847	-		Echvi_1089	0.22	-0.3
1,249,847	-		Echvi_1089	0.22	-0.3
1,249,847	-		Echvi_1089	0.22	-1.4
1,249,847	-		Echvi_1089	0.22	-0.3
1,249,847	-		Echvi_1089	0.22	-0.9
1,249,847	-		Echvi_1089	0.22	-1.4
1,249,847	-		Echvi_1089	0.22	+0.5
1,249,847	-		Echvi_1089	0.22	+0.9
1,249,919	-		Echvi_1089	0.26	-0.5
1,249,923	+		Echvi_1089	0.26	-1.0
1,249,977	+		Echvi_1089	0.30	+0.2
1,249,977	+		Echvi_1089	0.30	-0.7
1,249,978	-		Echvi_1089	0.30	-1.0
1,249,978	-		Echvi_1089	0.30	+0.6
1,249,978	-		Echvi_1089	0.30	-0.3
1,249,978	-		Echvi_1089	0.30	+0.4
1,250,019	+		Echvi_1089	0.32	-0.0
1,250,020	-		Echvi_1089	0.32	-0.4
1,250,060	+		Echvi_1089	0.34	-0.1
1,250,091	+		Echvi_1089	0.36	-0.7
1,250,092	-		Echvi_1089	0.36	-0.9
1,250,092	-		Echvi_1089	0.36	+0.6
1,250,280	-		Echvi_1089	0.47	-0.8
1,250,344	+		Echvi_1089	0.50	+3.2
1,250,407	+		Echvi_1089	0.54	+0.0
1,250,408	-		Echvi_1089	0.54	-1.5
1,250,408	-		Echvi_1089	0.54	+0.5
1,250,408	-		Echvi_1089	0.54	+0.6
1,250,413	-		Echvi_1089	0.54	-0.3