Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_0094

Experiment: m.b. D-Cycloserine 0.016 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. D-Cycloserine 0.016 mg/ml
92,509	+		Echvi_0093	0.11	+0.9
92,515	-		Echvi_0093	0.11	+0.3
92,533	+		Echvi_0093	0.13	-1.3
92,557	-		Echvi_0093	0.15	+1.3
92,557	-		Echvi_0093	0.15	+0.4
92,687	+		Echvi_0093	0.26	-0.8
92,687	+		Echvi_0093	0.26	-1.2
92,688	-		Echvi_0093	0.26	-1.6
92,810	+		Echvi_0093	0.37	+1.7
93,068	+		Echvi_0093	0.60	-3.1
93,162	+		Echvi_0093	0.69	-0.4
93,163	-		Echvi_0093	0.69	-0.4
93,190	+		Echvi_0093	0.71	+0.6
93,218	+		Echvi_0093	0.74	-0.2
93,218	+		Echvi_0093	0.74	+1.3
93,218	+		Echvi_0093	0.74	+0.9
93,313	+		Echvi_0093	0.82	+1.0
93,376	+		Echvi_0093	0.88	+0.0
93,451	+				-0.4
93,467	+				+0.0
93,467	+				+0.2
93,467	+				-0.1
93,468	-				-1.3
93,497	+				-0.9
93,499	+				+0.0
93,499	+				-1.6
93,499	+				+1.3
93,500	-				+0.3
93,500	-				-0.2
93,500	-				-2.3
93,500	-				-1.0
93,500	-				+0.3
93,523	-				-0.1
93,566	+		Echvi_0094	0.10	-0.2
93,566	+		Echvi_0094	0.10	-0.4
93,567	-		Echvi_0094	0.10	-0.8
93,567	-		Echvi_0094	0.10	+0.2
93,567	-		Echvi_0094	0.10	-0.3
93,600	+		Echvi_0094	0.16	-0.0
93,601	-		Echvi_0094	0.16	+0.6
93,601	-		Echvi_0094	0.16	+0.4
93,601	-		Echvi_0094	0.16	-0.1
93,656	+		Echvi_0094	0.25	-0.2
93,684	-		Echvi_0094	0.30	-2.0
93,684	-		Echvi_0094	0.30	-0.7
93,697	+		Echvi_0094	0.32	+0.2
93,748	-		Echvi_0094	0.40	+0.5
93,831	-		Echvi_0094	0.54	-1.2
93,831	-		Echvi_0094	0.54	-2.5
93,902	-		Echvi_0094	0.66	-1.4
93,914	+		Echvi_0094	0.68	-0.3
93,914	+		Echvi_0094	0.68	-1.7
93,915	-		Echvi_0094	0.68	-0.6
93,930	+		Echvi_0094	0.70	-0.2
94,105	+				+0.1
94,105	+				-0.8
94,105	+				+0.6
94,114	-				+0.1
94,114	-				-0.3
94,124	+				-0.6
94,125	-				+0.6
94,129	-				+0.2
94,129	-				+1.7
94,212	+				-1.8
94,282	+		Echvi_0095	0.13	-0.1
94,283	-		Echvi_0095	0.13	+0.4
94,283	-		Echvi_0095	0.13	-0.1
94,302	+		Echvi_0095	0.15	-0.2
94,304	+		Echvi_0095	0.15	+1.1
94,304	+		Echvi_0095	0.15	-1.2
94,304	+		Echvi_0095	0.15	-0.2
94,304	+		Echvi_0095	0.15	+1.4
94,305	-		Echvi_0095	0.15	+0.7
94,305	-		Echvi_0095	0.15	+0.7
94,637	+		Echvi_0095	0.45	-0.3
94,657	+		Echvi_0095	0.46	+0.4
94,700	+		Echvi_0095	0.50	+0.4
94,709	-		Echvi_0095	0.51	+2.3
94,709	-		Echvi_0095	0.51	-1.0
94,710	+		Echvi_0095	0.51	+1.2
94,710	+		Echvi_0095	0.51	+0.1
94,711	-		Echvi_0095	0.51	-1.1
94,729	+		Echvi_0095	0.53	-0.2
94,730	-		Echvi_0095	0.53	-0.6
94,839	+		Echvi_0095	0.62	+1.4
94,880	+		Echvi_0095	0.66	+1.1
94,958	+		Echvi_0095	0.73	-1.7
94,959	-		Echvi_0095	0.73	+0.4
95,032	+		Echvi_0095	0.79	-0.7