Strain Fitness in Escherichia coli BW25113 around b2988

Experiment: Carbenicillin 0.004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbenicillin 0.004 mg/ml
3,133,690	-	pitB	b2987	0.53	+0.2
3,133,849	+	pitB	b2987	0.64	+0.3
3,133,852	+	pitB	b2987	0.64	+1.1
3,133,852	+	pitB	b2987	0.64	+1.5
3,133,893	-	pitB	b2987	0.67	+0.1
3,133,898	-	pitB	b2987	0.67	+0.3
3,133,911	-	pitB	b2987	0.68	-0.3
3,133,974	-	pitB	b2987	0.72	+0.4
3,134,028	-	pitB	b2987	0.76	+0.5
3,134,052	+	pitB	b2987	0.77	-0.1
3,134,065	-	pitB	b2987	0.78	-1.3
3,134,098	+	pitB	b2987	0.80	+0.1
3,134,098	+	pitB	b2987	0.80	+0.1
3,134,115	+	pitB	b2987	0.81	-0.3
3,134,126	+	pitB	b2987	0.82	+0.6
3,134,133	+	pitB	b2987	0.83	-0.6
3,134,133	+	pitB	b2987	0.83	+0.3
3,134,156	+	pitB	b2987	0.84	+0.3
3,134,156	+	pitB	b2987	0.84	-0.2
3,134,169	+	pitB	b2987	0.85	+0.1
3,134,169	+				+1.1
3,134,169	+	pitB	b2987	0.85	-0.9
3,134,180	+	pitB	b2987	0.86	+0.1
3,134,180	+	pitB	b2987	0.86	+0.7
3,134,180	+	pitB	b2987	0.86	-0.1
3,134,183	-	pitB	b2987	0.86	+0.1
3,134,183	-	pitB	b2987	0.86	-1.5
3,134,190	+	pitB	b2987	0.86	+0.1
3,134,224	+	pitB	b2987	0.89	-0.4
3,134,231	+	pitB	b2987	0.89	-0.6
3,134,231	+	pitB	b2987	0.89	+0.2
3,134,253	+				+0.6
3,134,259	+				+0.5
3,134,259	+				-0.1
3,134,259	+				+2.0
3,134,259	+				-0.9
3,134,260	+				+1.1
3,134,302	+				-0.5
3,134,311	+				-0.7
3,134,311	+				+2.3
3,134,314	+				+0.8
3,134,327	+				+0.3
3,134,330	+				-0.2
3,134,330	+				+0.7
3,134,359	+				+0.7
3,134,359	+				+1.0
3,134,359	+				-1.5
3,134,359	+				+1.0
3,134,359	+				+0.1
3,134,359	+				+0.6
3,134,361	+				+1.1
3,134,361	+				-0.6
3,134,361	+				+0.4
3,134,361	+				-0.0
3,134,361	+				+0.0
3,134,361	+				+0.8
3,134,361	+				-0.2
3,134,431	+				+0.7
3,134,431	+				-0.4
3,134,652	-				-0.2
3,134,654	-				-0.1
3,134,654	-				+0.3
3,134,670	-				+0.6
3,134,670	-				+0.0
3,134,670	-				-0.9
3,134,670	-				+0.1
3,134,670	-				+0.2
3,134,670	-				+0.7
3,134,670	-				+1.1
3,134,670	-				+0.7
3,134,670	-				-0.0
3,134,670	-				-1.0
3,134,670	-				+0.2
3,134,680	-				+0.1
3,134,680	-				+0.2
3,134,680	-				+0.1
3,134,680	-				+0.4
3,134,681	-				-0.5
3,134,681	-				+0.1
3,134,743	-				-1.2
3,134,744	-				+0.6
3,134,749	-				+0.5
3,134,749	-				+0.4
3,134,749	-				+0.5
3,134,768	-				+0.4
3,134,768	-				-1.7
3,134,770	-				-1.2
3,134,770	-				+0.5
3,134,785	+				+0.3
3,134,785	-				+0.1
3,134,785	-				+0.6
3,134,794	-				+0.0
3,134,830	+				-0.1
3,134,886	-	gss	b2988	0.11	-0.9
3,134,925	-	gss	b2988	0.13	+0.2
3,135,269	+	gss	b2988	0.31	-1.5
3,135,269	+	gss	b2988	0.31	+0.8
3,135,283	-	gss	b2988	0.32	-0.7
3,135,304	+				+1.1
3,135,336	-	gss	b2988	0.35	+0.3
3,135,389	+	gss	b2988	0.38	+0.7
3,135,410	+	gss	b2988	0.39	+1.0
3,135,415	-	gss	b2988	0.39	-0.6
3,135,417	+	gss	b2988	0.39	+1.4
3,135,417	+	gss	b2988	0.39	+0.7
3,135,697	+	gss	b2988	0.54	-0.5
3,135,697	+	gss	b2988	0.54	+0.4
3,135,848	+	gss	b2988	0.63	+0.4
3,135,848	+	gss	b2988	0.63	-1.9
3,135,902	-	gss	b2988	0.65	+0.4
3,135,959	-	gss	b2988	0.68	-1.2
3,136,065	+	gss	b2988	0.74	-0.3
3,136,072	+	gss	b2988	0.75	+0.0
3,136,073	-	gss	b2988	0.75	+0.6
3,136,245	+	gss	b2988	0.84	+0.9
3,136,254	-	gss	b2988	0.84	+0.4
3,136,321	-	gss	b2988	0.88	+0.2
3,136,325	-	gss	b2988	0.88	-0.6
3,136,325	-	gss	b2988	0.88	+0.8
3,136,472	-				-1.9
3,136,472	-				+1.9
3,136,502	-				+1.0
3,136,505	-				-0.5
3,136,505	-				+1.1
3,136,534	+				-0.9
3,136,629	+				+0.6
3,136,629	+				+0.8
3,136,637	-				-0.5
3,136,647	-				+1.1
3,136,648	-				+0.7
3,136,706	+				-0.5
3,136,706	+				-0.4
3,136,729	-				-0.1
3,137,122	-	b2989	b2989	0.43	-0.2
3,137,208	+	b2989	b2989	0.53	-0.9
3,137,208	+	b2989	b2989	0.53	+0.9
3,137,294	+	b2989	b2989	0.63	-0.6
3,137,339	-	b2989	b2989	0.68	+1.4
3,137,360	+				+1.1
3,137,372	+	b2989	b2989	0.72	-0.1
3,137,372	+	b2989	b2989	0.72	+0.1
3,137,406	+	b2989	b2989	0.76	+1.2
3,137,414	-	b2989	b2989	0.77	-0.6
3,137,463	+	b2989	b2989	0.82	-0.2
3,137,525	-	b2989	b2989	0.90	+0.2
3,137,528	+	b2989	b2989	0.90	+2.1