Strain Fitness in Escherichia coli BW25113 around b1010

Experiment: Carbenicillin 0.004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbenicillin 0.004 mg/ml
1,070,145	-				+0.9
1,070,145	-				+1.2
1,070,152	-				+1.1
1,070,241	-				-0.3
1,070,241	-				-0.9
1,070,569	-	rarA	b1009	0.48	+0.7
1,070,580	-	rarA	b1009	0.49	+0.3
1,070,580	-	rarA	b1009	0.49	+1.0
1,070,633	-	rarA	b1009	0.56	-0.3
1,070,633	-	rarA	b1009	0.56	+0.7
1,070,678	-	rarA	b1009	0.61	+0.1
1,070,684	+	rarA	b1009	0.62	-0.9
1,070,689	+	rarA	b1009	0.63	+0.0
1,070,840	+	rarA	b1009	0.81	+0.4
1,070,863	-	rarA	b1009	0.84	-1.3
1,070,875	-	rarA	b1009	0.86	-0.6
1,070,875	-	rarA	b1009	0.86	-0.3
1,070,956	+				+1.0
1,070,956	+				-0.0
1,070,988	+				-0.3
1,071,230	-	ycdK	b1010	0.60	+0.9
1,071,301	-	ycdK	b1010	0.79	+1.1
1,071,301	-	ycdK	b1010	0.79	+0.7
1,071,301	-	ycdK	b1010	0.79	+1.7
1,071,319	-	ycdK	b1010	0.83	+0.9
1,071,343	-	ycdK	b1010	0.90	+0.9
1,071,343	-	ycdK	b1010	0.90	+0.1
1,071,382	+				+1.2
1,071,696	+	b1011	b1011	0.44	+0.7
1,071,712	+	b1011	b1011	0.46	+0.5
1,071,737	-	b1011	b1011	0.49	-0.4
1,072,068	+				+0.1
1,072,068	+				+0.3
1,072,104	-				+0.5
1,072,104	-				+1.2
1,072,188	+				+0.1