Experiment: Tween 20 (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PfGW456L13_1745 and PfGW456L13_1746 are separated by 191 nucleotides PfGW456L13_1746 and PfGW456L13_1747 overlap by 4 nucleotides
PfGW456L13_1745 - Alkyl hydroperoxide reductase subunit C-like protein, at 1,922,337 to 1,922,939
_1745
PfGW456L13_1746 - Ribonuclease T (EC 3.1.13.-), at 1,923,131 to 1,923,808
_1746
PfGW456L13_1747 - Dihydroorotase (EC 3.5.2.3), at 1,923,805 to 1,924,851
_1747
Position (kb)
1923
1924 Strain fitness (log2 ratio)
-1
0
1 at 1922.205 kb on + strand at 1922.206 kb on - strand at 1922.206 kb on - strand at 1922.228 kb on + strand at 1922.228 kb on + strand at 1922.228 kb on + strand at 1922.228 kb on + strand at 1922.228 kb on + strand at 1922.228 kb on + strand at 1922.228 kb on + strand at 1922.228 kb on + strand at 1922.229 kb on - strand at 1922.229 kb on - strand at 1922.229 kb on - strand at 1922.229 kb on - strand at 1922.229 kb on - strand at 1922.229 kb on - strand at 1922.229 kb on - strand at 1922.229 kb on - strand at 1922.316 kb on + strand at 1922.316 kb on + strand at 1922.317 kb on - strand at 1922.317 kb on - strand at 1922.317 kb on - strand at 1922.317 kb on - strand at 1922.317 kb on - strand at 1922.317 kb on - strand at 1922.319 kb on + strand at 1922.319 kb on + strand at 1922.319 kb on + strand at 1922.319 kb on + strand at 1922.319 kb on + strand at 1922.320 kb on - strand at 1922.320 kb on - strand at 1922.320 kb on - strand at 1922.320 kb on - strand at 1922.320 kb on - strand at 1922.320 kb on - strand at 1922.320 kb on - strand at 1922.332 kb on - strand at 1922.344 kb on + strand at 1922.345 kb on - strand at 1922.345 kb on - strand at 1922.350 kb on + strand at 1922.386 kb on + strand at 1922.445 kb on + strand, within PfGW456L13_1745 at 1922.445 kb on + strand, within PfGW456L13_1745 at 1922.445 kb on + strand, within PfGW456L13_1745 at 1922.446 kb on - strand, within PfGW456L13_1745 at 1922.446 kb on - strand, within PfGW456L13_1745 at 1922.446 kb on - strand, within PfGW456L13_1745 at 1922.446 kb on - strand, within PfGW456L13_1745 at 1922.463 kb on + strand, within PfGW456L13_1745 at 1922.464 kb on - strand, within PfGW456L13_1745 at 1922.679 kb on + strand, within PfGW456L13_1745 at 1922.679 kb on + strand, within PfGW456L13_1745 at 1922.679 kb on + strand, within PfGW456L13_1745 at 1922.937 kb on + strand at 1922.937 kb on + strand at 1922.938 kb on - strand at 1922.985 kb on - strand at 1923.002 kb on + strand at 1923.002 kb on + strand at 1923.002 kb on + strand at 1923.003 kb on - strand at 1923.003 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Tween 20 (C) remove 1,922,205 + +0.1 1,922,206 - -0.6 1,922,206 - -0.1 1,922,228 + +1.5 1,922,228 + -0.6 1,922,228 + +0.1 1,922,228 + +0.5 1,922,228 + +0.3 1,922,228 + +0.2 1,922,228 + -0.1 1,922,228 + -0.2 1,922,229 - -0.2 1,922,229 - +0.1 1,922,229 - +0.6 1,922,229 - -0.3 1,922,229 - -0.3 1,922,229 - -1.2 1,922,229 - -0.5 1,922,229 - -0.5 1,922,316 + -0.5 1,922,316 + +0.2 1,922,317 - -0.1 1,922,317 - -0.3 1,922,317 - -0.1 1,922,317 - -0.3 1,922,317 - -0.2 1,922,317 - +0.0 1,922,319 + -1.1 1,922,319 + +0.1 1,922,319 + +0.4 1,922,319 + -0.1 1,922,319 + +0.3 1,922,320 - +1.1 1,922,320 - +0.6 1,922,320 - +0.1 1,922,320 - +0.1 1,922,320 - +0.6 1,922,320 - -1.2 1,922,320 - -0.0 1,922,332 - +1.2 1,922,344 + +1.5 1,922,345 - -0.2 1,922,345 - -1.4 1,922,350 + -0.3 1,922,386 + -0.0 1,922,445 + PfGW456L13_1745 0.18 -0.7 1,922,445 + PfGW456L13_1745 0.18 -0.1 1,922,445 + PfGW456L13_1745 0.18 -0.5 1,922,446 - PfGW456L13_1745 0.18 -0.4 1,922,446 - PfGW456L13_1745 0.18 -0.4 1,922,446 - PfGW456L13_1745 0.18 -0.3 1,922,446 - PfGW456L13_1745 0.18 -0.0 1,922,463 + PfGW456L13_1745 0.21 -0.3 1,922,464 - PfGW456L13_1745 0.21 +0.0 1,922,679 + PfGW456L13_1745 0.57 -1.6 1,922,679 + PfGW456L13_1745 0.57 +0.5 1,922,679 + PfGW456L13_1745 0.57 -0.4 1,922,937 + -0.2 1,922,937 + -1.4 1,922,938 - +0.4 1,922,985 - -0.8 1,923,002 + -0.6 1,923,002 + -1.0 1,923,002 + -0.4 1,923,003 - -0.5 1,923,003 - -0.8
Or see this region's nucleotide sequence