Strain Fitness in Magnetospirillum magneticum AMB-1 around AMB_RS23985

Experiment: 150_an_nonmag_3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	150_an_nonmag_3
1,104,998	-				-0.8
1,104,998	-				+0.6
1,104,998	-				-0.6
1,104,998	-				+0.2
1,105,070	+				-0.5
1,105,070	+				-1.0
1,105,125	+		AMB_RS05325	0.13	-0.8
1,105,126	-		AMB_RS05325	0.13	-0.5
1,105,126	-		AMB_RS05325	0.13	-2.7
1,105,126	-		AMB_RS05325	0.13	+0.8
1,105,204	+		AMB_RS05325	0.21	-2.5
1,105,229	-		AMB_RS05325	0.23	+0.5
1,105,238	+		AMB_RS05325	0.24	-0.1
1,105,238	+		AMB_RS05325	0.24	-0.5
1,105,239	-		AMB_RS05325	0.24	+0.5
1,105,239	-		AMB_RS05325	0.24	+0.2
1,105,239	-		AMB_RS05325	0.24	+0.7
1,105,239	-		AMB_RS05325	0.24	-0.2
1,105,240	+		AMB_RS05325	0.24	-1.1
1,105,240	+		AMB_RS05325	0.24	-0.5
1,105,240	+		AMB_RS05325	0.24	-0.9
1,105,241	-		AMB_RS05325	0.24	+0.6
1,105,241	-		AMB_RS05325	0.24	+0.3
1,105,241	-		AMB_RS05325	0.24	-0.3
1,105,241	-		AMB_RS05325	0.24	-1.4
1,105,241	-		AMB_RS05325	0.24	-1.0
1,105,288	-		AMB_RS05325	0.29	+0.1
1,105,303	-		AMB_RS05325	0.31	+0.5
1,105,402	+		AMB_RS05325	0.41	+0.1
1,105,402	+		AMB_RS05325	0.41	-0.9
1,105,402	+		AMB_RS05325	0.41	-1.2
1,105,403	-		AMB_RS05325	0.41	-0.1
1,105,477	+		AMB_RS05325	0.48	+0.7
1,105,477	+		AMB_RS05325	0.48	-0.1
1,105,478	-		AMB_RS05325	0.48	-0.5
1,105,478	-		AMB_RS05325	0.48	+1.0
1,105,478	-		AMB_RS05325	0.48	-0.5
1,105,478	-		AMB_RS05325	0.48	-1.1
1,105,478	-		AMB_RS05325	0.48	+0.5
1,105,572	+		AMB_RS05325	0.58	-2.2
1,105,572	+		AMB_RS05325	0.58	-0.5
1,105,572	+		AMB_RS05325	0.58	+0.7
1,105,572	+		AMB_RS05325	0.58	-0.1
1,105,572	+		AMB_RS05325	0.58	-0.2
1,105,572	+		AMB_RS05325	0.58	+0.5
1,105,572	+		AMB_RS05325	0.58	-0.6
1,105,572	+		AMB_RS05325	0.58	-0.4
1,105,573	-		AMB_RS05325	0.58	-0.1
1,105,573	-		AMB_RS05325	0.58	-1.1
1,105,573	-		AMB_RS05325	0.58	+0.1
1,105,573	-		AMB_RS05325	0.58	-1.5
1,105,715	+		AMB_RS05325	0.72	-0.5
1,105,715	+		AMB_RS05325	0.72	-0.4
1,105,715	+		AMB_RS05325	0.72	-0.1
1,105,715	+		AMB_RS05325	0.72	+0.5
1,105,715	+		AMB_RS05325	0.72	-1.3
1,105,715	+		AMB_RS05325	0.72	+0.2
1,105,715	+		AMB_RS05325	0.72	-2.2
1,105,715	+		AMB_RS05325	0.72	-2.3
1,105,716	-		AMB_RS05325	0.72	-1.5
1,105,716	-		AMB_RS05325	0.72	-0.4
1,105,716	-		AMB_RS05325	0.72	-1.6
1,105,716	-		AMB_RS05325	0.72	-0.1
1,105,716	-		AMB_RS05325	0.72	-3.5
1,105,716	-		AMB_RS05325	0.72	-1.1
1,105,716	-		AMB_RS05325	0.72	-1.5
1,105,716	-		AMB_RS05325	0.72	+1.3
1,105,716	-		AMB_RS05325	0.72	-0.6
1,105,716	-		AMB_RS05325	0.72	-1.1
1,105,716	-		AMB_RS05325	0.72	-2.5
1,105,716	-		AMB_RS05325	0.72	-1.1
1,105,717	+		AMB_RS05325	0.72	-0.2
1,105,717	+		AMB_RS05325	0.72	+0.7
1,105,717	+		AMB_RS05325	0.72	-0.3
1,105,717	+		AMB_RS05325	0.72	+0.4
1,105,718	-		AMB_RS05325	0.72	-2.6
1,105,987	+				-1.3
1,106,030	+				+0.0
1,106,195	+				-0.9
1,106,196	-				+0.3
1,106,346	+		AMB_RS23985	0.16	+1.5
1,106,346	+		AMB_RS23985	0.16	-0.1
1,106,388	+		AMB_RS23985	0.18	-0.8
1,106,388	+		AMB_RS23985	0.18	-0.3
1,106,389	-		AMB_RS23985	0.18	+0.5
1,106,497	-		AMB_RS23985	0.23	-0.5
1,106,497	-		AMB_RS23985	0.23	-0.0
1,106,497	-		AMB_RS23985	0.23	+4.4
1,106,497	-		AMB_RS23985	0.23	-2.5
1,106,499	+		AMB_RS23985	0.23	-0.8
1,106,499	+		AMB_RS23985	0.23	+0.5
1,106,500	-		AMB_RS23985	0.23	+1.0
1,106,519	+		AMB_RS23985	0.24	-2.2
1,106,649	+		AMB_RS23985	0.29	-0.1
1,106,665	+		AMB_RS23985	0.30	+0.7
1,106,666	-		AMB_RS23985	0.30	-1.7
1,106,730	+		AMB_RS23985	0.33	-1.2
1,106,731	-		AMB_RS23985	0.33	+1.2
1,106,731	-		AMB_RS23985	0.33	-0.5
1,106,733	-		AMB_RS23985	0.33	+0.0
1,106,733	-		AMB_RS23985	0.33	-0.5
1,106,733	-		AMB_RS23985	0.33	+0.1
1,106,808	-		AMB_RS23985	0.36	+0.5
1,106,808	-		AMB_RS23985	0.36	-0.1
1,106,808	-		AMB_RS23985	0.36	-1.7
1,106,831	+		AMB_RS23985	0.37	-0.6
1,106,876	+		AMB_RS23985	0.39	+0.1
1,106,876	+		AMB_RS23985	0.39	-3.3
1,106,876	+		AMB_RS23985	0.39	+0.8
1,106,877	-		AMB_RS23985	0.39	-0.6
1,106,912	+		AMB_RS23985	0.41	-0.8
1,106,912	+		AMB_RS23985	0.41	-0.1
1,106,913	-		AMB_RS23985	0.41	-1.3
1,106,913	-		AMB_RS23985	0.41	+0.0
1,107,006	+		AMB_RS23985	0.45	-0.2
1,107,006	+		AMB_RS23985	0.45	+0.3
1,107,007	-		AMB_RS23985	0.45	-1.7
1,107,045	+		AMB_RS23985	0.46	-1.5
1,107,045	+		AMB_RS23985	0.46	+1.5
1,107,045	+		AMB_RS23985	0.46	-1.1
1,107,046	-		AMB_RS23985	0.46	-1.3
1,107,554	+		AMB_RS23985	0.68	-0.8
1,107,555	-		AMB_RS23985	0.68	+0.6
1,107,558	-		AMB_RS23985	0.68	-1.1
1,107,570	+		AMB_RS23985	0.69	-0.2
1,107,570	+		AMB_RS23985	0.69	-2.4
1,107,570	+		AMB_RS23985	0.69	-1.1
1,107,571	-		AMB_RS23985	0.69	+1.1
1,107,571	-		AMB_RS23985	0.69	-0.8
1,107,571	-		AMB_RS23985	0.69	-0.2
1,107,571	-		AMB_RS23985	0.69	-2.3
1,107,873	-		AMB_RS23985	0.82	-3.0
1,107,885	+		AMB_RS23985	0.82	-0.2
1,107,885	+		AMB_RS23985	0.82	-0.3
1,107,885	+		AMB_RS23985	0.82	-0.8
1,107,885	+		AMB_RS23985	0.82	+0.1
1,107,885	+		AMB_RS23985	0.82	-0.2
1,107,885	+		AMB_RS23985	0.82	+0.5
1,107,886	-		AMB_RS23985	0.82	+1.0
1,107,886	-		AMB_RS23985	0.82	+0.3
1,108,369	+				-1.1
1,108,369	+				+0.2
1,108,370	-				-0.8
1,108,370	-				+0.7
1,108,370	-				-0.5
1,108,484	+		AMB_RS05335	0.18	+0.3
1,108,544	+		AMB_RS05335	0.24	+0.3
1,108,545	-		AMB_RS05335	0.24	-1.1
1,108,603	+		AMB_RS05335	0.30	+0.1
1,108,603	+		AMB_RS05335	0.30	-2.9
1,108,603	+		AMB_RS05335	0.30	-0.1
1,108,604	-		AMB_RS05335	0.30	-2.6
1,108,604	-		AMB_RS05335	0.30	-1.1
1,108,604	-		AMB_RS05335	0.30	-0.7
1,108,604	-		AMB_RS05335	0.30	-0.4
1,108,604	-		AMB_RS05335	0.30	-1.3
1,108,604	-		AMB_RS05335	0.30	-2.4
1,108,606	+		AMB_RS05335	0.30	-1.9
1,108,606	+		AMB_RS05335	0.30	-0.1
1,108,606	+		AMB_RS05335	0.30	-2.1
1,108,606	+		AMB_RS05335	0.30	-0.1
1,108,606	+		AMB_RS05335	0.30	-0.2
1,108,607	-		AMB_RS05335	0.30	-0.3
1,108,607	-		AMB_RS05335	0.30	-2.2
1,108,607	-		AMB_RS05335	0.30	+0.3
1,108,607	-		AMB_RS05335	0.30	-0.5
1,108,607	-		AMB_RS05335	0.30	+0.5
1,108,607	-		AMB_RS05335	0.30	-0.5
1,108,607	-		AMB_RS05335	0.30	-1.1
1,108,607	-		AMB_RS05335	0.30	+0.1
1,108,607	-		AMB_RS05335	0.30	-2.8
1,108,607	-		AMB_RS05335	0.30	+0.0
1,108,680	+		AMB_RS05335	0.37	-0.2
1,108,864	+		AMB_RS05335	0.55	-2.0
1,108,864	+		AMB_RS05335	0.55	-0.5
1,108,864	+		AMB_RS05335	0.55	+0.3
1,108,864	+		AMB_RS05335	0.55	+0.5
1,108,864	+		AMB_RS05335	0.55	-1.7
1,108,865	-		AMB_RS05335	0.55	+0.0
1,108,865	-		AMB_RS05335	0.55	-0.8
1,108,951	-		AMB_RS05335	0.63	+1.5
1,109,258	-				-1.1
1,109,258	-				-1.5