Strain Fitness in Magnetospirillum magneticum AMB-1 around AMB_RS13220

Experiment: 150_an_nonmag_3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	150_an_nonmag_3
2,813,434	+		AMB_RS13215	0.65	-0.8
2,813,434	+		AMB_RS13215	0.65	-1.8
2,813,434	+		AMB_RS13215	0.65	-0.1
2,813,434	+		AMB_RS13215	0.65	-0.9
2,813,434	+		AMB_RS13215	0.65	-0.1
2,813,434	+		AMB_RS13215	0.65	+0.6
2,813,435	-		AMB_RS13215	0.65	+0.0
2,813,435	-		AMB_RS13215	0.65	-0.5
2,813,435	-		AMB_RS13215	0.65	-0.6
2,813,435	-		AMB_RS13215	0.65	-1.1
2,813,435	-		AMB_RS13215	0.65	-0.3
2,813,435	-		AMB_RS13215	0.65	-0.5
2,813,435	-		AMB_RS13215	0.65	-0.0
2,813,435	-		AMB_RS13215	0.65	-1.0
2,813,477	-		AMB_RS13215	0.67	+0.2
2,813,477	-		AMB_RS13215	0.67	-0.5
2,813,536	+		AMB_RS13215	0.71	-1.2
2,813,536	+		AMB_RS13215	0.71	+1.5
2,813,537	-		AMB_RS13215	0.71	-0.0
2,813,602	+		AMB_RS13215	0.75	-0.8
2,813,626	+		AMB_RS13215	0.76	-0.9
2,813,627	-		AMB_RS13215	0.76	-0.3
2,813,627	-		AMB_RS13215	0.76	+0.3
2,813,699	+		AMB_RS13215	0.81	+1.5
2,813,699	+		AMB_RS13215	0.81	-0.7
2,813,700	-		AMB_RS13215	0.81	-0.1
2,813,701	+		AMB_RS13215	0.81	+0.1
2,813,701	+		AMB_RS13215	0.81	-2.3
2,813,701	+		AMB_RS13215	0.81	-0.0
2,813,701	+		AMB_RS13215	0.81	-0.4
2,813,701	+		AMB_RS13215	0.81	-0.9
2,813,701	+		AMB_RS13215	0.81	-0.1
2,813,701	+		AMB_RS13215	0.81	+0.4
2,813,702	-		AMB_RS13215	0.81	-0.7
2,813,702	-		AMB_RS13215	0.81	-0.1
2,813,768	+		AMB_RS13215	0.85	-2.6
2,813,768	+		AMB_RS13215	0.85	-2.4
2,813,768	+		AMB_RS13215	0.85	-0.5
2,813,768	+		AMB_RS13215	0.85	+1.2
2,813,768	+		AMB_RS13215	0.85	-1.8
2,813,768	+		AMB_RS13215	0.85	+0.1
2,813,768	+		AMB_RS13215	0.85	-1.5
2,813,769	-		AMB_RS13215	0.85	+0.9
2,813,769	-		AMB_RS13215	0.85	-0.1
2,813,769	-		AMB_RS13215	0.85	+0.1
2,813,769	-		AMB_RS13215	0.85	-3.8
2,813,769	-		AMB_RS13215	0.85	+0.7
2,813,769	-		AMB_RS13215	0.85	+0.2
2,813,770	+		AMB_RS13215	0.85	-0.5
2,813,770	+		AMB_RS13215	0.85	+0.4
2,813,770	+		AMB_RS13215	0.85	-0.5
2,813,770	+		AMB_RS13215	0.85	-3.3
2,813,770	+		AMB_RS13215	0.85	+0.5
2,813,771	-		AMB_RS13215	0.85	-0.1
2,813,771	-		AMB_RS13215	0.85	-0.1
2,813,771	-		AMB_RS13215	0.85	-0.4
2,813,771	-		AMB_RS13215	0.85	-1.3
2,813,771	-		AMB_RS13215	0.85	+0.6
2,813,771	-		AMB_RS13215	0.85	-0.1
2,813,771	-		AMB_RS13215	0.85	-0.1
2,813,827	+		AMB_RS13215	0.88	+0.8
2,813,866	+				+0.2
2,813,866	+				-1.3
2,813,867	-				-0.7
2,813,867	-				-0.3
2,813,867	-				-0.8
2,814,021	+				-0.4
2,814,022	-				+0.9
2,814,022	-				+0.1
2,814,022	-				-0.3
2,814,022	-				-0.5
2,814,087	+		AMB_RS13220	0.21	-1.3
2,814,088	-		AMB_RS13220	0.22	+0.5
2,814,088	-		AMB_RS13220	0.22	-1.5
2,814,219	+		AMB_RS13220	0.63	-0.2
2,814,219	+		AMB_RS13220	0.63	-0.3
2,814,219	+		AMB_RS13220	0.63	-0.2
2,814,219	+		AMB_RS13220	0.63	-1.5
2,814,219	+		AMB_RS13220	0.63	-2.4
2,814,220	-		AMB_RS13220	0.63	-0.8
2,814,220	-		AMB_RS13220	0.63	-1.8
2,814,222	+		AMB_RS13220	0.64	-0.9
2,814,222	+		AMB_RS13220	0.64	+0.4
2,814,223	-		AMB_RS13220	0.64	-0.1
2,814,223	-		AMB_RS13220	0.64	+0.1
2,814,223	-		AMB_RS13220	0.64	-0.5
2,814,223	-		AMB_RS13220	0.64	-0.8
2,814,265	+		AMB_RS13220	0.78	-0.3
2,814,315	+				-0.7
2,814,315	+				+0.2
2,814,315	+				+0.2
2,814,315	+				+0.5
2,814,316	-				-2.0
2,814,316	-				+1.5
2,814,351	-				-0.4
2,814,354	+				-0.2
2,814,354	+				-0.5
2,814,354	+				-0.2
2,814,354	+				+0.6
2,814,354	+				-1.1
2,814,354	+				-0.5
2,814,354	+				+0.4
2,814,354	+				-0.8
2,814,354	+				-1.3
2,814,354	+				-1.5
2,814,354	+				-0.0
2,814,355	-				-0.9
2,814,355	-				+0.5
2,814,355	-				-1.5
2,814,355	-				-0.0
2,814,355	-				-0.1
2,814,355	-				-0.9
2,814,355	-				-0.0
2,814,355	-				+0.3
2,814,355	-				-0.2
2,814,355	-				+0.2
2,814,355	-				-1.3
2,814,371	+				+0.4
2,814,425	+				+0.6
2,814,548	+				-0.4
2,814,548	+				+0.2
2,814,548	+				-2.0
2,814,549	-				-2.0
2,814,549	-				-0.4
2,814,599	+				-1.5
2,814,599	+				-1.7
2,814,678	-				+0.9
2,814,678	-				-0.2
2,814,678	-				-0.1
2,814,678	-				+0.0
2,814,714	-				+0.3
2,814,821	+				+0.1
2,814,821	+				-0.5
2,814,822	-				-1.1
2,814,822	-				-0.8
2,814,822	-				-1.3
2,814,863	+				+0.2
2,814,863	+				-1.1
2,814,864	-				-1.3
2,814,864	-				+0.5
2,814,971	+		AMB_RS13225	0.13	+0.5
2,814,972	-		AMB_RS13225	0.13	-1.1
2,814,972	-		AMB_RS13225	0.13	-0.2
2,814,973	+		AMB_RS13225	0.13	-0.2
2,814,973	+		AMB_RS13225	0.13	-0.8
2,814,974	-		AMB_RS13225	0.13	-2.0
2,814,974	-		AMB_RS13225	0.13	-1.7
2,814,974	-		AMB_RS13225	0.13	-0.1
2,814,974	-		AMB_RS13225	0.13	+0.9
2,814,974	-		AMB_RS13225	0.13	+0.5
2,814,989	+		AMB_RS13225	0.14	-2.5
2,814,989	+		AMB_RS13225	0.14	-0.4
2,814,990	-		AMB_RS13225	0.14	+1.3
2,815,124	-		AMB_RS13225	0.19	-1.8
2,815,127	+		AMB_RS13225	0.19	-1.1
2,815,127	+		AMB_RS13225	0.19	-0.3
2,815,127	+		AMB_RS13225	0.19	-2.0
2,815,127	+		AMB_RS13225	0.19	-0.3
2,815,128	-		AMB_RS13225	0.19	-1.8
2,815,175	+		AMB_RS13225	0.21	-1.4
2,815,223	+		AMB_RS13225	0.22	+1.0
2,815,223	+		AMB_RS13225	0.22	+0.5
2,815,224	-		AMB_RS13225	0.22	-0.5
2,815,322	+		AMB_RS13225	0.26	+1.5
2,815,323	-		AMB_RS13225	0.26	+0.4
2,815,328	+		AMB_RS13225	0.26	-2.0
2,815,328	+		AMB_RS13225	0.26	-1.5
2,815,328	+		AMB_RS13225	0.26	-0.4
2,815,329	-		AMB_RS13225	0.26	-0.5
2,815,329	-		AMB_RS13225	0.26	-0.5
2,815,329	-		AMB_RS13225	0.26	-0.5
2,815,329	-		AMB_RS13225	0.26	-1.1
2,815,330	+		AMB_RS13225	0.26	-0.0
2,815,331	-		AMB_RS13225	0.26	-2.4
2,815,331	-		AMB_RS13225	0.26	-2.1