Strain Fitness in Escherichia coli BW25113 around b4378

Experiment: Spectinomycin 0.0125 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Spectinomycin 0.0125 mg/ml
4,610,514	+				+0.5
4,610,576	-	yjjU	b4377	0.13	-0.1
4,610,676	+	yjjU	b4377	0.23	+1.2
4,610,820	-	yjjU	b4377	0.36	-0.6
4,610,833	+	yjjU	b4377	0.37	+1.4
4,610,849	+	yjjU	b4377	0.39	-0.4
4,610,870	-	yjjU	b4377	0.41	-0.8
4,610,913	-	yjjU	b4377	0.45	-0.8
4,610,913	-	yjjU	b4377	0.45	+2.0
4,610,963	-	yjjU	b4377	0.49	-0.7
4,611,050	+	yjjU	b4377	0.57	-0.2
4,611,198	-	yjjU	b4377	0.71	-2.0
4,611,219	+	yjjU	b4377	0.73	+0.3
4,611,241	+	yjjU	b4377	0.75	+0.9
4,611,251	+	yjjU	b4377	0.76	-1.0
4,611,251	+	yjjU	b4377	0.76	+0.1
4,611,257	+	yjjU	b4377	0.77	+0.5
4,611,322	-	yjjU	b4377	0.83	-0.2
4,611,322	-	yjjU	b4377	0.83	+0.8
4,611,461	+				+0.1
4,611,538	-				-0.3
4,611,564	+				+3.2
4,611,573	+				+0.6
4,611,573	+				+1.8
4,611,661	-	yjjV	b4378	0.20	+0.8
4,611,661	-	yjjV	b4378	0.20	+0.4
4,611,695	-	yjjV	b4378	0.24	-1.1
4,611,695	-	yjjV	b4378	0.24	+0.2
4,611,811	-	yjjV	b4378	0.39	+0.2
4,611,912	+	yjjV	b4378	0.52	-1.3
4,611,950	-	yjjV	b4378	0.57	-0.1
4,611,988	+	yjjV	b4378	0.62	-0.4
4,612,032	+	yjjV	b4378	0.68	+1.2
4,612,032	+	yjjV	b4378	0.68	-0.5
4,612,040	+	yjjV	b4378	0.69	+0.3
4,612,112	+	yjjV	b4378	0.78	-1.4
4,612,255	-				-0.0
4,612,258	+				+0.2
4,612,258	+				-0.1
4,612,275	-				-0.2
4,612,312	+				-0.4
4,612,319	+				+0.5
4,612,349	-				-0.1
4,612,349	-				-0.2
4,612,369	-				-1.6
4,612,395	+				+0.1
4,612,397	-				+0.1
4,612,431	-				-1.0
4,612,475	-				-0.1
4,612,475	-				-0.2
4,612,558	-				+0.0
4,612,630	+				+1.4
4,612,642	+				-0.2
4,612,659	-				+1.2
4,612,740	-				+0.8
4,612,740	-				+0.4
4,612,747	+				+0.2
4,612,800	-	yjjW	b4379	0.11	-0.3
4,612,811	+	yjjW	b4379	0.12	+0.2
4,612,811	+	yjjW	b4379	0.12	+0.2
4,612,822	-	yjjW	b4379	0.14	+0.6
4,612,822	-	yjjW	b4379	0.14	+2.2
4,612,905	-	yjjW	b4379	0.23	+0.3
4,612,915	+	yjjW	b4379	0.25	+0.8
4,612,923	-	yjjW	b4379	0.25	+1.0
4,612,932	-	yjjW	b4379	0.27	+0.6
4,612,990	+	yjjW	b4379	0.33	-0.1
4,613,060	+	yjjW	b4379	0.41	+1.6
4,613,077	+	yjjW	b4379	0.43	+0.0
4,613,122	-	yjjW	b4379	0.48	+0.2
4,613,140	+	yjjW	b4379	0.51	+0.9
4,613,140	+	yjjW	b4379	0.51	-2.1
4,613,215	+	yjjW	b4379	0.59	-0.1
4,613,215	+	yjjW	b4379	0.59	-1.1
4,613,253	+	yjjW	b4379	0.64	+1.2
4,613,255	+	yjjW	b4379	0.64	-1.0
4,613,263	-	yjjW	b4379	0.65	+0.5