Strain Fitness in Escherichia coli BW25113 around b4383

Experiment: Spectinomycin 0.0125 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Spectinomycin 0.0125 mg/ml
4,616,663	+	deoA	b4382	0.31	+1.5
4,616,727	-	deoA	b4382	0.36	+0.7
4,616,731	+	deoA	b4382	0.36	+1.4
4,616,749	+	deoA	b4382	0.38	+0.8
4,616,760	+	deoA	b4382	0.38	+0.7
4,616,791	-	deoA	b4382	0.41	-0.0
4,616,823	-	deoA	b4382	0.43	+0.0
4,616,940	-	deoA	b4382	0.52	+0.6
4,616,958	-	deoA	b4382	0.53	-0.1
4,616,958	-	deoA	b4382	0.53	-0.1
4,616,965	+	deoA	b4382	0.54	+0.6
4,616,984	+	deoA	b4382	0.55	+0.4
4,616,987	-	deoA	b4382	0.56	+0.4
4,616,987	-	deoA	b4382	0.56	-0.5
4,616,997	+	deoA	b4382	0.56	+0.7
4,617,084	-	deoA	b4382	0.63	+0.5
4,617,088	+	deoA	b4382	0.63	+0.9
4,617,154	-	deoA	b4382	0.68	-0.3
4,617,158	+	deoA	b4382	0.68	+0.5
4,617,193	-	deoA	b4382	0.71	+0.7
4,617,258	+	deoA	b4382	0.76	+1.6
4,617,278	+	deoA	b4382	0.78	+1.2
4,617,278	+	deoA	b4382	0.78	+1.9
4,617,285	-	deoA	b4382	0.78	+0.6
4,617,386	-	deoA	b4382	0.86	+0.8
4,617,390	-	deoA	b4382	0.86	+0.2
4,617,390	-	deoA	b4382	0.86	+0.8
4,617,396	+	deoA	b4382	0.86	+1.8
4,617,396	+	deoA	b4382	0.86	+1.7
4,617,613	+				+0.6
4,617,631	-				-1.7
4,617,647	+				-1.3
4,617,647	+				-2.1
4,617,647	+				-1.4
4,617,655	-				-0.0
4,617,680	-				-1.1
4,617,691	+				+0.2
4,617,726	-				-0.9
4,617,861	+	deoB	b4383	0.19	+0.2
4,617,869	-	deoB	b4383	0.20	-2.6
4,617,891	-	deoB	b4383	0.22	-0.3
4,617,961	-	deoB	b4383	0.27	-2.2
4,618,009	+	deoB	b4383	0.31	-1.2
4,618,009	+	deoB	b4383	0.31	-1.3
4,618,012	+	deoB	b4383	0.32	-3.4
4,618,012	+	deoB	b4383	0.32	-0.9
4,618,030	+	deoB	b4383	0.33	-1.1
4,618,030	+	deoB	b4383	0.33	-1.8
4,618,076	+	deoB	b4383	0.37	+0.2
4,618,088	+	deoB	b4383	0.38	-1.6
4,618,285	+	deoB	b4383	0.54	-2.3
4,618,335	+	deoB	b4383	0.58	-1.3
4,618,411	+				+1.2
4,618,411	+	deoB	b4383	0.64	-2.7
4,618,411	+	deoB	b4383	0.64	-2.4
4,618,411	+	deoB	b4383	0.64	+1.2
4,618,512	-	deoB	b4383	0.72	-0.4
4,618,512	-	deoB	b4383	0.72	-0.0
4,618,528	+	deoB	b4383	0.74	-1.6
4,618,553	-	deoB	b4383	0.76	-1.8
4,618,587	+	deoB	b4383	0.79	+0.4
4,618,587	+	deoB	b4383	0.79	+0.5
4,618,641	-	deoB	b4383	0.83	-0.9
4,618,646	+	deoB	b4383	0.83	-0.3
4,618,646	+	deoB	b4383	0.83	-0.9
4,618,681	+	deoB	b4383	0.86	+0.2
4,618,681	+	deoB	b4383	0.86	-1.4
4,618,687	+	deoB	b4383	0.87	-1.8
4,618,689	-	deoB	b4383	0.87	+0.2
4,618,714	+	deoB	b4383	0.89	-0.2
4,618,718	-	deoB	b4383	0.89	-0.4
4,618,718	-	deoB	b4383	0.89	-2.3
4,618,732	-				-1.1
4,618,851	-				-1.0
4,618,864	+				+1.5
4,618,872	-				-1.1
4,618,977	-				-0.7
4,618,991	-	deoD	b4384	0.12	-1.4
4,619,050	-	deoD	b4384	0.20	-1.4
4,619,050	-	deoD	b4384	0.20	-1.3
4,619,089	+	deoD	b4384	0.25	-2.6
4,619,094	+	deoD	b4384	0.26	-0.8
4,619,094	+	deoD	b4384	0.26	+0.2
4,619,104	+	deoD	b4384	0.28	+0.9
4,619,104	+	deoD	b4384	0.28	-1.1
4,619,109	+	deoD	b4384	0.28	-1.6
4,619,117	-	deoD	b4384	0.29	+0.2
4,619,119	+	deoD	b4384	0.30	-1.0
4,619,119	+	deoD	b4384	0.30	+1.2
4,619,128	+	deoD	b4384	0.31	-0.6
4,619,131	+	deoD	b4384	0.31	-0.2
4,619,198	+	deoD	b4384	0.41	-0.2
4,619,223	+	deoD	b4384	0.44	-0.8
4,619,272	+	deoD	b4384	0.51	+0.8
4,619,279	+	deoD	b4384	0.52	-2.1
4,619,298	+	deoD	b4384	0.54	+0.2
4,619,298	+	deoD	b4384	0.54	+0.6
4,619,316	-	deoD	b4384	0.57	-1.8
4,619,335	+	deoD	b4384	0.60	+0.6
4,619,335	+	deoD	b4384	0.60	-0.4
4,619,336	-	deoD	b4384	0.60	-0.1
4,619,340	+	deoD	b4384	0.60	-0.0
4,619,355	+	deoD	b4384	0.62	+0.2
4,619,375	-	deoD	b4384	0.65	-2.5
4,619,375	-	deoD	b4384	0.65	+0.2
4,619,382	+	deoD	b4384	0.66	-1.4
4,619,382	+	deoD	b4384	0.66	-1.1
4,619,385	-	deoD	b4384	0.67	-2.1
4,619,385	-	deoD	b4384	0.67	-0.7
4,619,390	-	deoD	b4384	0.67	-1.7
4,619,390	-	deoD	b4384	0.67	-0.4
4,619,512	+	deoD	b4384	0.84	+0.2
4,619,513	+	deoD	b4384	0.84	-2.0
4,619,513	+	deoD	b4384	0.84	+0.5
4,619,513	+	deoD	b4384	0.84	-0.9
4,619,541	+	deoD	b4384	0.88	-1.1
4,619,564	-				-2.7
4,619,564	-				-1.0
4,619,593	+				-0.6