Strain Fitness in Escherichia coli BW25113 around b3931

Experiment: Spectinomycin 0.0125 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Spectinomycin 0.0125 mg/ml
4,117,514	-				+0.8
4,117,516	+				-0.8
4,117,516	+				+0.2
4,117,538	+				+0.5
4,117,538	+				+2.1
4,117,547	+	menA	b3930	0.11	-1.0
4,117,547	+	menA	b3930	0.11	+0.5
4,117,575	-	menA	b3930	0.14	+0.3
4,117,575	-	menA	b3930	0.14	-0.5
4,117,616	+	menA	b3930	0.18	+1.9
4,117,622	-	menA	b3930	0.19	+0.5
4,117,624	-	menA	b3930	0.19	+0.5
4,117,634	-	menA	b3930	0.20	-0.0
4,117,634	-	menA	b3930	0.20	+0.8
4,117,647	-	menA	b3930	0.22	+0.5
4,117,647	-	menA	b3930	0.22	+0.4
4,117,654	+	menA	b3930	0.22	-0.0
4,117,668	-	menA	b3930	0.24	-0.5
4,117,701	-	menA	b3930	0.28	+1.3
4,117,701	-	menA	b3930	0.28	+0.3
4,117,773	+	menA	b3930	0.35	+0.0
4,117,777	-	menA	b3930	0.36	+0.2
4,117,792	-	menA	b3930	0.37	+1.3
4,117,792	-	menA	b3930	0.37	-0.3
4,117,794	+	menA	b3930	0.38	-1.6
4,117,829	+	menA	b3930	0.41	+0.2
4,117,829	+	menA	b3930	0.41	-1.1
4,117,837	-	menA	b3930	0.42	+1.0
4,117,837	-	menA	b3930	0.42	+0.1
4,117,837	-	menA	b3930	0.42	+0.0
4,117,837	-	menA	b3930	0.42	+1.1
4,117,841	+	menA	b3930	0.43	+0.4
4,117,841	+	menA	b3930	0.43	+0.6
4,117,853	+	menA	b3930	0.44	+1.0
4,117,856	-	menA	b3930	0.44	+1.4
4,117,861	-	menA	b3930	0.45	+0.2
4,117,866	+	menA	b3930	0.45	+0.4
4,117,873	+	menA	b3930	0.46	+0.4
4,117,901	+	menA	b3930	0.49	+0.0
4,117,909	-	menA	b3930	0.50	+0.1
4,117,920	+	menA	b3930	0.51	+1.0
4,117,928	-	menA	b3930	0.52	+0.3
4,117,928	-	menA	b3930	0.52	-0.4
4,117,928	-	menA	b3930	0.52	-0.9
4,117,929	-	menA	b3930	0.52	+1.5
4,117,935	-	menA	b3930	0.53	+0.5
4,117,948	+	menA	b3930	0.54	-0.6
4,117,948	+	menA	b3930	0.54	+1.0
4,117,948	+	menA	b3930	0.54	+0.5
4,117,953	+	menA	b3930	0.55	+0.4
4,117,956	-	menA	b3930	0.55	-0.8
4,117,956	-	menA	b3930	0.55	-0.5
4,118,020	-	menA	b3930	0.62	-0.0
4,118,020	-	menA	b3930	0.62	+1.2
4,118,020	-	menA	b3930	0.62	+1.5
4,118,020	-	menA	b3930	0.62	+0.8
4,118,034	-	menA	b3930	0.63	-0.3
4,118,044	-	menA	b3930	0.65	+1.0
4,118,044	-	menA	b3930	0.65	-0.5
4,118,049	-	menA	b3930	0.65	+0.0
4,118,049	-	menA	b3930	0.65	-1.3
4,118,055	+	menA	b3930	0.66	-0.0
4,118,055	+	menA	b3930	0.66	+0.8
4,118,063	-	menA	b3930	0.67	+2.4
4,118,063	-	menA	b3930	0.67	+0.6
4,118,068	+	menA	b3930	0.67	+0.8
4,118,068	+	menA	b3930	0.67	+0.2
4,118,091	-	menA	b3930	0.70	+0.8
4,118,109	-	menA	b3930	0.72	-0.6
4,118,130	-	menA	b3930	0.74	+0.8
4,118,130	-	menA	b3930	0.74	+0.4
4,118,132	+	menA	b3930	0.74	+1.1
4,118,146	+	menA	b3930	0.76	+0.3
4,118,190	+	menA	b3930	0.80	+0.0
4,118,190	+	menA	b3930	0.80	+0.5
4,118,190	-	menA	b3930	0.80	+0.5
4,118,190	-	menA	b3930	0.80	-1.3
4,118,197	-	menA	b3930	0.81	+0.0
4,118,197	-	menA	b3930	0.81	+0.5
4,118,202	+	menA	b3930	0.82	+1.0
4,118,204	+	menA	b3930	0.82	+0.1
4,118,208	-	menA	b3930	0.82	-1.8
4,118,212	-	menA	b3930	0.83	-0.7
4,118,223	-	menA	b3930	0.84	+0.4
4,118,263	+	menA	b3930	0.88	+1.0
4,118,265	-	menA	b3930	0.88	+1.5
4,118,268	+	menA	b3930	0.89	+2.0
4,118,268	+	menA	b3930	0.89	+1.5
4,118,269	-	menA	b3930	0.89	-0.0
4,118,269	-	menA	b3930	0.89	+1.5
4,118,271	-	menA	b3930	0.89	+0.2
4,118,292	-				-0.4
4,118,329	+				-0.5
4,118,376	-				+0.3
4,118,398	+				-0.5
4,118,398	+				-0.3
4,118,406	-				+1.7
4,118,424	-				+0.2
4,118,504	-				-0.2
4,118,504	-				+0.8
4,118,513	-				-0.9
4,118,513	-				-0.8
4,118,529	+				-1.5
4,118,554	-				-1.3
4,118,571	+				-0.3
4,118,579	-	hslU	b3931	0.11	-0.5
4,118,579	-	hslU	b3931	0.11	-2.8
4,118,581	+	hslU	b3931	0.11	+0.4
4,118,581	+	hslU	b3931	0.11	-1.0
4,118,581	-	hslU	b3931	0.11	-1.3
4,118,583	+	hslU	b3931	0.11	-2.0
4,118,583	+	hslU	b3931	0.11	-0.2
4,118,697	-	hslU	b3931	0.19	-1.0
4,118,701	+	hslU	b3931	0.20	-0.8
4,118,706	+	hslU	b3931	0.20	-0.6
4,118,706	+	hslU	b3931	0.20	+0.1
4,118,707	-	hslU	b3931	0.20	-1.0
4,118,707	-	hslU	b3931	0.20	-0.9
4,118,716	+	hslU	b3931	0.21	-0.5
4,118,716	+	hslU	b3931	0.21	+1.3
4,118,716	+	hslU	b3931	0.21	-1.1
4,118,716	+	hslU	b3931	0.21	-1.3
4,118,724	-	hslU	b3931	0.21	-0.0
4,118,741	+	hslU	b3931	0.23	-0.3
4,118,741	+	hslU	b3931	0.23	-1.5
4,118,744	-	hslU	b3931	0.23	-0.9
4,118,744	-	hslU	b3931	0.23	-1.3
4,118,749	-	hslU	b3931	0.23	+0.3
4,118,749	-	hslU	b3931	0.23	+0.2
4,118,792	+	hslU	b3931	0.27	-0.1
4,118,800	+	hslU	b3931	0.27	-1.5
4,118,807	+	hslU	b3931	0.28	-0.0
4,118,836	+	hslU	b3931	0.30	-0.3
4,118,849	-	hslU	b3931	0.31	+1.5
4,118,849	-	hslU	b3931	0.31	-0.3
4,118,868	-	hslU	b3931	0.32	-0.3
4,118,868	-	hslU	b3931	0.32	-0.5
4,118,897	-	hslU	b3931	0.34	-2.0
4,118,958	+	hslU	b3931	0.39	-0.3
4,118,965	-	hslU	b3931	0.39	+0.1
4,119,011	+	hslU	b3931	0.43	-0.8
4,119,011	+	hslU	b3931	0.43	-1.3
4,119,016	+	hslU	b3931	0.43	-1.5
4,119,019	-	hslU	b3931	0.44	+0.1
4,119,024	-	hslU	b3931	0.44	+1.5
4,119,024	-	hslU	b3931	0.44	-1.5
4,119,026	+	hslU	b3931	0.44	+0.5
4,119,032	-	hslU	b3931	0.45	+0.2
4,119,043	-	hslU	b3931	0.45	+0.3
4,119,047	-	hslU	b3931	0.46	-0.0
4,119,047	-	hslU	b3931	0.46	-0.1
4,119,051	+	hslU	b3931	0.46	+0.2
4,119,101	+	hslU	b3931	0.50	+0.7
4,119,111	-	hslU	b3931	0.50	-2.3
4,119,145	+	hslU	b3931	0.53	-0.8
4,119,145	+	hslU	b3931	0.53	-2.0
4,119,163	-	hslU	b3931	0.54	+0.5
4,119,163	-	hslU	b3931	0.54	-1.3
4,119,169	+	hslU	b3931	0.55	+0.3
4,119,171	-	hslU	b3931	0.55	-1.3
4,119,199	-	hslU	b3931	0.57	-1.0
4,119,253	+	hslU	b3931	0.61	-1.0
4,119,345	+	hslU	b3931	0.68	-0.8
4,119,403	-	hslU	b3931	0.72	-1.0
4,119,452	-	hslU	b3931	0.76	+1.4
4,119,462	-	hslU	b3931	0.77	-1.0
4,119,487	+	hslU	b3931	0.79	-1.1
4,119,489	+	hslU	b3931	0.79	+0.2
4,119,489	+	hslU	b3931	0.79	-0.5
4,119,493	-	hslU	b3931	0.79	-0.6
4,119,513	+	hslU	b3931	0.81	-1.3
4,119,555	-	hslU	b3931	0.84	+1.5
4,119,561	-	hslU	b3931	0.84	-1.3
4,119,597	-	hslU	b3931	0.87	-1.6
4,119,597	-	hslU	b3931	0.87	+0.2
4,119,670	+				-0.9
4,119,686	+				-2.3
4,119,686	+				-1.1
4,119,691	+				-1.3
4,119,697	+				-1.3
4,119,697	+				-0.8
4,119,698	+				-0.6
4,119,703	+				-0.9
4,119,703	+				-1.5
4,119,703	+				-1.5
4,119,703	+				-1.5
4,119,703	+				-0.5
4,119,703	+				-0.3
4,119,703	+				-0.7
4,119,704	-				-0.3
4,119,708	+				-0.3
4,119,732	-				-1.2
4,119,736	+				-1.1
4,119,777	+				-0.0
4,119,777	+				+1.0
4,119,778	-				+0.3
4,119,795	-				-1.0
4,119,795	-				+1.0
4,119,795	-				-1.3
4,119,816	-				+1.0
4,119,816	-				+1.5
4,119,816	-				-0.4
4,119,823	+				-2.0
4,119,828	+				+0.4
4,119,876	+	hslV	b3932	0.18	-2.0
4,119,877	-	hslV	b3932	0.18	-0.9
4,119,879	+	hslV	b3932	0.19	+1.1
4,119,884	+	hslV	b3932	0.20	-0.3
4,119,897	-	hslV	b3932	0.22	-0.5
4,119,897	-	hslV	b3932	0.22	+1.0
4,119,900	-	hslV	b3932	0.23	-0.5
4,119,900	-	hslV	b3932	0.23	-2.6
4,119,966	-	hslV	b3932	0.35	+0.8
4,119,981	-	hslV	b3932	0.38	+0.5
4,119,989	-	hslV	b3932	0.39	-0.0
4,119,991	+	hslV	b3932	0.40	-1.1
4,120,026	-	hslV	b3932	0.46	-1.3
4,120,028	-	hslV	b3932	0.47	-0.8
4,120,046	+	hslV	b3932	0.50	-0.8
4,120,046	+	hslV	b3932	0.50	-0.3
4,120,053	+	hslV	b3932	0.51	-1.5
4,120,055	+	hslV	b3932	0.52	+0.2
4,120,055	+	hslV	b3932	0.52	-1.2
4,120,057	+	hslV	b3932	0.52	-0.5
4,120,057	+	hslV	b3932	0.52	+0.2
4,120,076	+	hslV	b3932	0.56	+1.0
4,120,076	+	hslV	b3932	0.56	-0.6
4,120,087	+	hslV	b3932	0.58	-1.8
4,120,142	+	hslV	b3932	0.68	-0.5
4,120,142	+	hslV	b3932	0.68	-0.9
4,120,142	+	hslV	b3932	0.68	+0.4
4,120,155	-	hslV	b3932	0.71	-0.2
4,120,162	-	hslV	b3932	0.72	-0.3
4,120,162	-	hslV	b3932	0.72	-1.0
4,120,173	+	hslV	b3932	0.74	-2.0
4,120,210	+	hslV	b3932	0.81	-0.6
4,120,232	+	hslV	b3932	0.85	-1.0
4,120,232	+	hslV	b3932	0.85	-1.5
4,120,234	-	hslV	b3932	0.85	-0.0
4,120,242	-	hslV	b3932	0.87	+0.2
4,120,243	+	hslV	b3932	0.87	-1.5
4,120,243	+	hslV	b3932	0.87	-1.4
4,120,251	-	hslV	b3932	0.89	-1.4
4,120,256	-	hslV	b3932	0.90	-0.8
4,120,287	+				-0.3
4,120,289	-				+1.1
4,120,289	-				-1.4
4,120,303	-				-1.2
4,120,329	+				+0.5
4,120,339	+				-1.6
4,120,357	+				-1.2
4,120,361	-				-0.5
4,120,383	-				+0.8
4,120,441	-				+0.2
4,120,456	+				-0.5
4,120,456	-				-0.0
4,120,464	-				-0.1
4,120,518	+	ftsN	b3933	0.12	-0.8
4,120,518	+	ftsN	b3933	0.12	-0.7
4,120,564	-	ftsN	b3933	0.17	-1.0
4,120,564	-	ftsN	b3933	0.17	-1.5
4,120,569	-	ftsN	b3933	0.17	-2.8
4,120,575	+	ftsN	b3933	0.18	-2.5
4,120,575	+	ftsN	b3933	0.18	-3.0
4,120,578	-	ftsN	b3933	0.18	+1.0
4,120,601	-	ftsN	b3933	0.21	-1.0
4,120,601	-	ftsN	b3933	0.21	-0.5
4,120,601	-	ftsN	b3933	0.21	-0.5
4,120,607	+	ftsN	b3933	0.21	-1.9
4,120,607	+	ftsN	b3933	0.21	-2.0
4,120,607	+	ftsN	b3933	0.21	-2.2
4,120,615	-	ftsN	b3933	0.22	-0.0
4,120,615	-	ftsN	b3933	0.22	-0.2
4,120,615	-	ftsN	b3933	0.22	-0.8
4,120,651	+	ftsN	b3933	0.26	-2.1
4,120,653	-	ftsN	b3933	0.26	+0.4
4,120,653	-	ftsN	b3933	0.26	-0.3
4,120,670	-	ftsN	b3933	0.28	-0.4
4,120,670	-	ftsN	b3933	0.28	-0.2
4,120,681	+	ftsN	b3933	0.29	-1.3
4,120,695	+	ftsN	b3933	0.30	-1.4
4,120,695	+	ftsN	b3933	0.30	-3.0
4,120,715	-	ftsN	b3933	0.33	-0.0
4,120,740	+	ftsN	b3933	0.35	+0.5
4,120,740	+	ftsN	b3933	0.35	-1.5
4,120,763	-	ftsN	b3933	0.38	-0.0
4,120,765	+	ftsN	b3933	0.38	-2.3
4,120,767	+	ftsN	b3933	0.38	-1.5