Strain Fitness in Escherichia coli BW25113 around b3827

Experiment: Spectinomycin 0.0125 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Spectinomycin 0.0125 mg/ml
4,008,225	+				-1.1
4,008,230	+				-1.0
4,008,230	+				-0.4
4,008,302	+				-1.6
4,008,302	+				-0.7
4,008,310	-	yigL	b3826	0.11	-0.4
4,008,350	+	yigL	b3826	0.16	+1.2
4,008,350	+	yigL	b3826	0.16	+1.1
4,008,393	-	yigL	b3826	0.21	+0.2
4,008,416	+	yigL	b3826	0.24	+0.4
4,008,430	+	yigL	b3826	0.26	+1.2
4,008,489	-	yigL	b3826	0.33	-0.6
4,008,495	+	yigL	b3826	0.34	-1.1
4,008,496	-	yigL	b3826	0.34	-1.0
4,008,505	+	yigL	b3826	0.35	-0.7
4,008,526	-	yigL	b3826	0.38	+1.4
4,008,526	-	yigL	b3826	0.38	-0.4
4,008,529	+	yigL	b3826	0.38	-0.4
4,008,572	+	yigL	b3826	0.44	-1.6
4,008,572	+	yigL	b3826	0.44	-1.2
4,008,621	+	yigL	b3826	0.50	-0.4
4,008,629	-	yigL	b3826	0.51	+0.9
4,008,629	-	yigL	b3826	0.51	+0.0
4,008,629	-	yigL	b3826	0.51	+1.3
4,008,632	+	yigL	b3826	0.51	+2.4
4,008,677	+	yigL	b3826	0.57	+0.6
4,008,677	+	yigL	b3826	0.57	-0.1
4,008,680	+	yigL	b3826	0.57	+0.6
4,008,688	-	yigL	b3826	0.58	+0.5
4,008,708	+	yigL	b3826	0.61	-0.8
4,008,754	+	yigL	b3826	0.66	-1.0
4,008,754	+	yigL	b3826	0.66	-2.5
4,008,754	+	yigL	b3826	0.66	-0.6
4,008,754	+	yigL	b3826	0.66	+0.7
4,008,762	-	yigL	b3826	0.67	+0.0
4,008,762	-	yigL	b3826	0.67	-1.6
4,008,903	-	yigL	b3826	0.85	-0.1
4,008,910	+	yigL	b3826	0.86	+0.9
4,008,918	-	yigL	b3826	0.87	-0.8
4,008,920	+	yigL	b3826	0.87	+1.0
4,008,920	+	yigL	b3826	0.87	+0.9
4,008,920	+	yigL	b3826	0.87	-0.1
4,008,968	+				+0.0
4,009,067	-				+0.9
4,009,082	-				-0.1
4,009,134	-				-0.9
4,009,176	-				-0.2
4,009,176	-				-0.1
4,009,205	-	yigM	b3827	0.12	+0.2
4,009,275	+	yigM	b3827	0.20	-0.0
4,009,275	+	yigM	b3827	0.20	-0.1
4,009,275	+	yigM	b3827	0.20	-0.6
4,009,275	+	yigM	b3827	0.20	-0.2
4,009,275	+	yigM	b3827	0.20	-0.5
4,009,275	+	yigM	b3827	0.20	-0.9
4,009,283	-	yigM	b3827	0.20	+0.3
4,009,283	-	yigM	b3827	0.20	+0.6
4,009,311	-	yigM	b3827	0.24	-1.9
4,009,334	+	yigM	b3827	0.26	+2.2
4,009,334	+	yigM	b3827	0.26	+1.4
4,009,338	-	yigM	b3827	0.27	+1.0
4,009,348	-	yigM	b3827	0.28	+2.0
4,009,348	-	yigM	b3827	0.28	+0.4
4,009,406	-	yigM	b3827	0.34	-0.3
4,009,428	+	yigM	b3827	0.37	-1.1
4,009,434	+	yigM	b3827	0.37	+0.6
4,009,434	+	yigM	b3827	0.37	-0.6
4,009,451	-	yigM	b3827	0.39	+0.9
4,009,495	-	yigM	b3827	0.44	-0.1
4,009,495	-	yigM	b3827	0.44	-0.4
4,009,506	+	yigM	b3827	0.45	+0.6
4,009,524	-	yigM	b3827	0.47	+2.1
4,009,600	+	yigM	b3827	0.56	-0.1
4,009,772	+	yigM	b3827	0.75	-0.8
4,009,839	-	yigM	b3827	0.82	-0.4
4,009,839	-	yigM	b3827	0.82	+2.9
4,009,845	-	yigM	b3827	0.83	+0.4
4,009,845	-	yigM	b3827	0.83	-1.4
4,009,874	+	yigM	b3827	0.86	+0.4
4,009,904	+				+0.3
4,009,917	-				-0.7
4,009,921	-				+1.0
4,009,921	-				+0.6
4,009,947	-				+0.0
4,010,026	-	metR	b3828	0.15	+0.0
4,010,026	-	metR	b3828	0.15	-0.4
4,010,038	-	metR	b3828	0.16	+0.0
4,010,048	-	metR	b3828	0.17	-0.9
4,010,094	-	metR	b3828	0.22	+0.7
4,010,094	-	metR	b3828	0.22	-0.8
4,010,094	-	metR	b3828	0.22	+0.2
4,010,100	-	metR	b3828	0.22	-0.2
4,010,113	+	metR	b3828	0.24	-1.3
4,010,152	-	metR	b3828	0.28	+0.5
4,010,245	+	metR	b3828	0.38	+0.1
4,010,247	+	metR	b3828	0.38	+2.0
4,010,267	+	metR	b3828	0.40	+1.0
4,010,267	+	metR	b3828	0.40	+0.7
4,010,337	-	metR	b3828	0.47	+2.6
4,010,353	+	metR	b3828	0.49	+1.8
4,010,386	-	metR	b3828	0.52	-0.1
4,010,386	-	metR	b3828	0.52	+0.8
4,010,386	-	metR	b3828	0.52	-0.0
4,010,461	-	metR	b3828	0.60	+0.3
4,010,461	-	metR	b3828	0.60	+1.6
4,010,541	+	metR	b3828	0.69	-0.4
4,010,541	+	metR	b3828	0.69	-1.5
4,010,546	-	metR	b3828	0.69	-0.0
4,010,549	-	metR	b3828	0.69	+1.2
4,010,560	-	metR	b3828	0.71	+0.4
4,010,560	-	metR	b3828	0.71	+1.0
4,010,572	-	metR	b3828	0.72	-0.7
4,010,572	-	metR	b3828	0.72	+0.6
4,010,677	-	metR	b3828	0.83	+1.6
4,010,729	+	metR	b3828	0.88	-0.8
4,010,969	+				+0.1
4,010,977	-				+0.2