Strain Fitness in Escherichia coli BW25113 around b3647

Experiment: Spectinomycin 0.0125 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Spectinomycin 0.0125 mg/ml
3,816,531	+				+0.5
3,816,561	-				-1.0
3,816,629	+				+0.3
3,816,632	+				+0.6
3,816,666	+				+1.3
3,816,670	+				-0.0
3,816,866	-				+0.6
3,816,908	-				+0.0
3,816,908	-				+1.0
3,816,908	-				+0.6
3,816,908	-				+1.2
3,816,934	-				+0.9
3,816,938	+				+1.8
3,816,938	+				-0.7
3,816,946	-				+0.2
3,816,947	-				+0.7
3,816,947	-				+0.7
3,816,961	+	yicG	b3646	0.10	+0.5
3,816,966	+	yicG	b3646	0.11	+1.3
3,816,966	+	yicG	b3646	0.11	+1.6
3,816,986	-	yicG	b3646	0.14	+1.5
3,816,986	-	yicG	b3646	0.14	-0.7
3,817,027	+	yicG	b3646	0.21	+1.3
3,817,027	+	yicG	b3646	0.21	+0.8
3,817,051	+	yicG	b3646	0.25	+2.5
3,817,052	-	yicG	b3646	0.25	+0.4
3,817,057	-	yicG	b3646	0.26	+0.8
3,817,087	+	yicG	b3646	0.31	+1.1
3,817,087	+	yicG	b3646	0.31	+0.1
3,817,146	+	yicG	b3646	0.40	+1.2
3,817,149	-	yicG	b3646	0.41	+1.1
3,817,149	-	yicG	b3646	0.41	+1.5
3,817,207	+	yicG	b3646	0.50	-0.1
3,817,215	-	yicG	b3646	0.51	+0.7
3,817,231	-	yicG	b3646	0.54	-1.5
3,817,285	-	yicG	b3646	0.63	+1.8
3,817,285	-	yicG	b3646	0.63	+0.6
3,817,328	+	yicG	b3646	0.70	+1.3
3,817,328	+	yicG	b3646	0.70	+1.8
3,817,335	+	yicG	b3646	0.71	+0.4
3,817,345	-	yicG	b3646	0.72	+3.3
3,817,371	-	yicG	b3646	0.77	+1.0
3,817,376	-	yicG	b3646	0.78	+0.7
3,817,376	-	yicG	b3646	0.78	+1.3
3,817,378	-	yicG	b3646	0.78	+1.2
3,817,391	+	yicG	b3646	0.80	+1.7
3,817,401	+	yicG	b3646	0.82	+2.1
3,817,401	+	yicG	b3646	0.82	+0.5
3,817,433	-	yicG	b3646	0.87	+0.4
3,817,485	+				+0.4
3,817,506	-				+0.5
3,817,607	+				+0.2
3,817,615	-				+2.5
3,817,615	-				-0.3
3,817,640	-				+1.2
3,817,665	+				+0.1
3,817,670	+				-0.1
3,817,673	-				+0.4
3,817,673	-				+0.6
3,817,708	+	yicF	b3647	0.12	+0.5
3,817,716	-	yicF	b3647	0.12	+2.1
3,817,795	+	yicF	b3647	0.17	-1.1
3,817,795	+	yicF	b3647	0.17	-1.0
3,817,828	-	yicF	b3647	0.19	+1.2
3,817,828	-	yicF	b3647	0.19	+1.9
3,817,877	-	yicF	b3647	0.22	+0.0
3,817,877	-	yicF	b3647	0.22	+1.0
3,817,897	+	yicF	b3647	0.23	+0.9
3,817,900	-	yicF	b3647	0.23	+0.7
3,817,918	-	yicF	b3647	0.24	+1.7
3,817,918	-	yicF	b3647	0.24	+1.9
3,817,939	+	yicF	b3647	0.25	-0.4
3,818,035	+	yicF	b3647	0.31	-0.5
3,818,043	-	yicF	b3647	0.32	+0.5
3,818,043	-	yicF	b3647	0.32	+1.0
3,818,225	-	yicF	b3647	0.42	-0.0
3,818,255	-	yicF	b3647	0.44	+0.5
3,818,255	-	yicF	b3647	0.44	+1.6
3,818,289	+	yicF	b3647	0.46	+1.0
3,818,304	+	yicF	b3647	0.47	+0.4
3,818,375	-	yicF	b3647	0.51	+0.5
3,818,375	-	yicF	b3647	0.51	+1.2
3,818,388	+	yicF	b3647	0.52	+0.0
3,818,390	+	yicF	b3647	0.52	-0.1
3,818,400	+	yicF	b3647	0.53	-0.5
3,818,400	+	yicF	b3647	0.53	+1.3
3,818,439	+	yicF	b3647	0.55	-0.3
3,818,496	+	yicF	b3647	0.59	-0.3
3,818,564	+	yicF	b3647	0.63	+1.5
3,818,627	+	yicF	b3647	0.66	-0.5
3,818,672	+	yicF	b3647	0.69	+0.1
3,818,672	+	yicF	b3647	0.69	-0.3
3,818,675	+	yicF	b3647	0.69	+0.2
3,818,680	-	yicF	b3647	0.69	+1.8
3,818,735	+	yicF	b3647	0.73	+0.0
3,818,743	-	yicF	b3647	0.73	-1.9
3,818,781	+	yicF	b3647	0.75	-0.0
3,818,794	+	yicF	b3647	0.76	-0.0
3,818,794	+	yicF	b3647	0.76	+0.6
3,818,806	+	yicF	b3647	0.77	+0.5
3,818,832	+	yicF	b3647	0.78	-1.2
3,818,840	-	yicF	b3647	0.79	-0.1
3,818,886	+	yicF	b3647	0.82	-0.2
3,818,899	+	yicF	b3647	0.82	-0.5
3,818,904	-	yicF	b3647	0.83	+1.9
3,818,920	+	yicF	b3647	0.84	+0.1
3,818,938	-	yicF	b3647	0.85	+0.5
3,818,994	-	yicF	b3647	0.88	+1.1
3,818,994	-	yicF	b3647	0.88	+1.2
3,819,005	-	yicF	b3647	0.89	+0.1
3,819,005	-	yicF	b3647	0.89	+0.6
3,819,041	-				+0.2
3,819,053	-				+0.5
3,819,065	-				+0.8
3,819,111	-				+0.8
3,819,121	+				+0.3
3,819,121	+				+3.3
3,819,130	-				+1.8
3,819,173	-				+0.7
3,819,191	+				+0.2
3,819,197	-				+0.1
3,819,197	-				-0.4
3,819,212	-				-1.1
3,819,234	+				+0.1
3,819,252	-				+0.4
3,819,252	-				+0.1
3,819,303	-				+1.3
3,819,394	-				-1.1
3,819,394	-				+0.1
3,820,087	-				-0.0
3,820,111	-				+0.5
3,820,144	+				-0.9
3,820,144	+				+0.5
3,820,151	+				-0.1