Strain Fitness in Escherichia coli BW25113 around b1452
Experiment: Spectinomycin 0.0125 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Spectinomycin 0.0125 mg/ml |
---|---|---|---|---|---|
remove | |||||
1,520,920 | - | -1.0 | |||
1,520,920 | - | -0.0 | |||
1,521,210 | - | -1.0 | |||
1,521,495 | + | yncE | b1452 | 0.15 | -0.8 |
1,521,525 | + | yncE | b1452 | 0.18 | -0.2 |
1,521,525 | + | yncE | b1452 | 0.18 | +0.3 |
1,521,556 | - | yncE | b1452 | 0.21 | +0.2 |
1,521,593 | + | yncE | b1452 | 0.25 | -0.1 |
1,521,593 | + | yncE | b1452 | 0.25 | -0.2 |
1,521,642 | + | yncE | b1452 | 0.29 | +0.3 |
1,521,660 | - | yncE | b1452 | 0.31 | -0.0 |
1,521,660 | - | yncE | b1452 | 0.31 | +2.6 |
1,521,932 | - | yncE | b1452 | 0.57 | -0.3 |
1,522,035 | + | yncE | b1452 | 0.66 | +0.4 |
1,522,067 | - | yncE | b1452 | 0.69 | +2.2 |
1,522,186 | + | yncE | b1452 | 0.81 | +0.6 |
1,522,403 | - | -0.2 | |||
1,522,414 | - | +0.6 | |||
1,522,664 | - | ansP | b1453 | 0.11 | +0.2 |
1,522,740 | + | ansP | b1453 | 0.16 | +0.2 |
1,522,856 | + | ansP | b1453 | 0.23 | -1.0 |
1,523,330 | - | ansP | b1453 | 0.55 | +0.0 |
Or see this region's nucleotide sequence