Strain Fitness in Escherichia coli BW25113 around b1411

Experiment: Spectinomycin 0.0125 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Spectinomycin 0.0125 mg/ml
1,478,058	+	ynbC	b1410	0.51	+1.7
1,478,302	-	ynbC	b1410	0.65	-0.0
1,478,317	-	ynbC	b1410	0.66	+0.3
1,478,327	+	ynbC	b1410	0.66	+1.2
1,478,410	+	ynbC	b1410	0.71	+1.2
1,479,031	-				+0.6
1,479,098	+	ynbD	b1411	0.13	+3.3
1,479,163	+	ynbD	b1411	0.18	+1.5
1,479,431	-	ynbD	b1411	0.39	+1.4
1,479,489	+	ynbD	b1411	0.43	+1.6
1,479,501	+	ynbD	b1411	0.44	+2.4
1,479,504	+	ynbD	b1411	0.44	+2.6
1,479,574	-	ynbD	b1411	0.50	+0.2
1,479,579	-	ynbD	b1411	0.50	-0.8
1,479,579	-	ynbD	b1411	0.50	-0.1
1,479,586	-	ynbD	b1411	0.51	-0.7
1,479,670	-	ynbD	b1411	0.57	-0.8
1,479,673	+	ynbD	b1411	0.57	+1.1
1,479,970	-	ynbD	b1411	0.80	+0.4
1,480,154	-				+0.1
1,480,167	+				+2.6
1,480,271	+				+3.1
1,480,271	+				+3.1
1,480,667	-	azoR	b1412	0.64	+1.4
1,480,729	+	azoR	b1412	0.74	+2.3
1,480,729	+	azoR	b1412	0.74	+0.8