Strain Fitness in Escherichia coli BW25113 around b1292
Experiment: Spectinomycin 0.0125 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Spectinomycin 0.0125 mg/ml |
---|---|---|---|---|---|
remove | |||||
1,350,656 | - | -0.1 | |||
1,350,749 | + | +0.1 | |||
1,350,855 | + | sapD | b1291 | 0.20 | +0.6 |
1,350,861 | + | sapD | b1291 | 0.20 | -1.7 |
1,350,997 | - | sapD | b1291 | 0.34 | -2.7 |
1,351,021 | - | sapD | b1291 | 0.36 | -0.9 |
1,351,342 | - | sapD | b1291 | 0.69 | +0.6 |
1,351,739 | - | -1.4 | |||
1,352,074 | - | sapC | b1292 | 0.47 | -0.4 |
1,352,113 | + | sapC | b1292 | 0.52 | -2.2 |
1,352,173 | + | sapC | b1292 | 0.58 | -0.4 |
1,352,173 | + | sapC | b1292 | 0.58 | +0.6 |
1,352,254 | + | sapC | b1292 | 0.68 | -1.4 |
1,352,290 | - | sapC | b1292 | 0.72 | -1.7 |
1,352,351 | - | sapC | b1292 | 0.78 | -1.4 |
1,352,438 | + | sapC | b1292 | 0.88 | -0.4 |
1,352,770 | - | sapB | b1293 | 0.25 | -1.9 |
1,352,770 | - | sapB | b1293 | 0.25 | +0.6 |
1,352,790 | + | sapB | b1293 | 0.27 | -0.4 |
1,353,131 | + | sapB | b1293 | 0.62 | -1.7 |
1,353,522 | + | -1.4 |
Or see this region's nucleotide sequence