Strain Fitness in Escherichia coli BW25113 around b0011

Experiment: Spectinomycin 0.0125 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Spectinomycin 0.0125 mg/ml
9,763	-	mog	b0009	0.78	+2.8
9,763	-	mog	b0009	0.78	+4.9
9,765	-	mog	b0009	0.78	+2.0
9,799	+	mog	b0009	0.84	+1.9
9,816	+	mog	b0009	0.87	+1.9
9,826	-	mog	b0009	0.88	+2.8
9,826	-	mog	b0009	0.88	+2.3
9,862	-				+0.3
9,941	+				+0.2
10,021	-	yaaH	b0010	0.16	+0.2
10,021	-	yaaH	b0010	0.16	-0.3
10,184	+	yaaH	b0010	0.45	+0.9
10,194	+	yaaH	b0010	0.47	+1.2
10,194	+	yaaH	b0010	0.47	+1.1
10,223	+	yaaH	b0010	0.52	+1.0
10,296	-	yaaH	b0010	0.65	+1.1
10,334	-	yaaH	b0010	0.72	+0.4
10,364	+	yaaH	b0010	0.77	+0.1
10,364	+	yaaH	b0010	0.77	-0.4
10,414	+	yaaH	b0010	0.86	+0.4
10,425	+	yaaH	b0010	0.88	-0.6
10,445	+				+1.8
10,445	+				-0.6
10,455	+				+1.3
10,464	+				+0.5
10,487	-				+0.1
10,489	+				-1.9
10,489	+				-0.3
10,594	+				+0.3
10,646	+				-0.2
10,648	+				-0.1
10,656	-				+0.4
10,664	-				+1.5
10,731	+	yaaW	b0011	0.12	+0.6
10,731	+	yaaW	b0011	0.12	-1.2
10,761	-	yaaW	b0011	0.17	-0.1
10,762	-	yaaW	b0011	0.17	-0.1
10,763	-	yaaW	b0011	0.17	+0.5
10,766	+	yaaW	b0011	0.17	+1.1
10,766	+	yaaW	b0011	0.17	-0.3
10,795	+	yaaW	b0011	0.21	+1.8
10,808	-	yaaW	b0011	0.23	+0.1
10,936	-	yaaW	b0011	0.41	+0.5
10,936	-	yaaW	b0011	0.41	-1.2
10,963	-	yaaW	b0011	0.45	-0.5
10,963	-	yaaW	b0011	0.45	-0.1
11,196	-	yaaW	b0011	0.77	+0.7
11,196	-	yaaW	b0011	0.77	+0.5
11,235	-	yaaW	b0011	0.83	+1.1
11,235	-	yaaW	b0011	0.83	-0.5
11,304	+				-1.5
11,398	-				+0.2
11,398	-				+1.1
11,399	+				-0.2
11,399	+				-0.2
11,410	+				-1.1
11,416	+				+0.3
11,422	+				+0.8
11,432	-	yaaI	b0013	0.12	+0.1
11,506	-	yaaI	b0013	0.31	+0.7
11,506	-	yaaI	b0013	0.31	+0.3
11,541	-	yaaI	b0013	0.39	-0.2
11,546	+	yaaI	b0013	0.40	+1.1
11,546	+	yaaI	b0013	0.40	+0.2
11,601	+	yaaI	b0013	0.54	+0.2
11,613	+	yaaI	b0013	0.57	-0.1
11,614	-	yaaI	b0013	0.57	-0.1
11,651	+	yaaI	b0013	0.66	-0.4
11,718	+	yaaI	b0013	0.83	-0.9
11,718	+	yaaI	b0013	0.83	-0.1
12,025	+				-1.4
12,057	+				-2.1
12,141	+				-1.6