Strain Fitness in Escherichia coli BW25113 around b0007

Experiment: Spectinomycin 0.0125 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Spectinomycin 0.0125 mg/ml
5,639	-				-0.0
5,699	-				-2.2
5,699	-				-0.4
5,788	-	yaaA	b0006	0.14	+0.8
5,788	-	yaaA	b0006	0.14	+0.9
5,835	-	yaaA	b0006	0.20	+0.1
5,879	-	yaaA	b0006	0.25	-1.1
5,891	-	yaaA	b0006	0.27	+0.2
5,898	+	yaaA	b0006	0.28	-0.5
5,958	+	yaaA	b0006	0.35	-0.8
5,976	+	yaaA	b0006	0.38	+0.5
5,976	+	yaaA	b0006	0.38	+1.3
5,995	+	yaaA	b0006	0.40	-0.1
6,005	-	yaaA	b0006	0.41	-1.1
6,027	-	yaaA	b0006	0.44	-0.7
6,071	-	yaaA	b0006	0.50	+0.2
6,073	-	yaaA	b0006	0.50	+1.4
6,073	-	yaaA	b0006	0.50	-0.0
6,087	+	yaaA	b0006	0.52	+1.1
6,087	+	yaaA	b0006	0.52	+0.8
6,108	+	yaaA	b0006	0.55	-1.9
6,108	+	yaaA	b0006	0.55	-0.5
6,278	+	yaaA	b0006	0.77	+0.4
6,278	+	yaaA	b0006	0.77	-1.3
6,285	-	yaaA	b0006	0.77	+0.0
6,288	-	yaaA	b0006	0.78	+0.7
6,288	-	yaaA	b0006	0.78	-0.1
6,317	+	yaaA	b0006	0.82	+0.6
6,317	+	yaaA	b0006	0.82	-0.9
6,317	-	yaaA	b0006	0.82	+0.2
6,317	-	yaaA	b0006	0.82	-0.5
6,348	+	yaaA	b0006	0.86	-0.4
6,348	+	yaaA	b0006	0.86	+0.8
6,348	+	yaaA	b0006	0.86	-0.3
6,355	+	yaaA	b0006	0.86	+1.0
6,420	+				+0.2
6,456	+				+2.7
6,456	+				+1.7
6,550	-				+0.1
6,604	-				+0.6
6,604	-				-0.4
6,606	-				-0.8
6,683	-	yaaJ	b0007	0.11	-0.9
6,694	+	yaaJ	b0007	0.12	+0.8
6,747	+	yaaJ	b0007	0.15	+1.1
6,748	+	yaaJ	b0007	0.15	+0.5
6,756	-	yaaJ	b0007	0.16	+0.2
6,756	-	yaaJ	b0007	0.16	+1.5
6,815	-	yaaJ	b0007	0.20	+1.5
6,869	+	yaaJ	b0007	0.24	+0.7
6,910	+	yaaJ	b0007	0.27	+0.6
6,915	-	yaaJ	b0007	0.27	+0.2
6,929	+	yaaJ	b0007	0.28	+2.7
6,934	-	yaaJ	b0007	0.28	-0.1
6,976	+	yaaJ	b0007	0.31	+0.9
6,985	-	yaaJ	b0007	0.32	+1.1
7,196	+	yaaJ	b0007	0.47	-0.7
7,196	+	yaaJ	b0007	0.47	+0.2
7,203	-	yaaJ	b0007	0.47	+0.2
7,206	-	yaaJ	b0007	0.47	-0.7
7,213	+	yaaJ	b0007	0.48	-0.2
7,213	+	yaaJ	b0007	0.48	+1.5
7,230	+	yaaJ	b0007	0.49	+1.2
7,264	-	yaaJ	b0007	0.51	-2.5
7,264	-	yaaJ	b0007	0.51	+0.8
7,319	-	yaaJ	b0007	0.55	+0.2
7,342	+	yaaJ	b0007	0.57	+0.6
7,356	+	yaaJ	b0007	0.58	+2.1
7,356	+	yaaJ	b0007	0.58	+0.6
7,371	-	yaaJ	b0007	0.59	+0.8
7,560	+	yaaJ	b0007	0.72	-0.5
7,560	+	yaaJ	b0007	0.72	+1.8
7,560	+	yaaJ	b0007	0.72	+0.3
7,560	+	yaaJ	b0007	0.72	+0.8
7,560	+	yaaJ	b0007	0.72	-0.7
7,644	+	yaaJ	b0007	0.78	-0.2
7,686	-	yaaJ	b0007	0.81	+0.1
7,750	-	yaaJ	b0007	0.85	+0.2
7,771	-	yaaJ	b0007	0.87	+2.1
7,800	+	yaaJ	b0007	0.89	-0.7
7,889	+				+1.3
7,889	+				+0.7
7,897	-				+0.1
7,941	-				-1.2
7,968	+				-0.0
7,997	+				+0.2
8,015	+				-1.2
8,015	+				+2.1
8,051	+				-2.1
8,051	-				+0.4
8,059	-				+0.6
8,059	-				-0.9
8,096	+				+1.1
8,096	+				+0.3
8,125	+				+0.2
8,195	-				-1.6
8,197	+				+0.1
8,197	+				+1.4
8,205	-				-2.2
8,270	-				-0.9
8,270	-				-2.2
8,312	+				-2.9
8,400	+	talB	b0008	0.17	-0.9
8,400	+	talB	b0008	0.17	+1.1
8,607	-	talB	b0008	0.39	-2.4
8,623	-	talB	b0008	0.40	-3.3
8,625	-	talB	b0008	0.41	-3.4
8,625	-	talB	b0008	0.41	-1.8
8,625	-	talB	b0008	0.41	-3.2
8,630	-	talB	b0008	0.41	-2.4
8,670	-	talB	b0008	0.45	+0.1
8,670	-	talB	b0008	0.45	-2.6
8,711	+	talB	b0008	0.50	-1.9
8,721	+	talB	b0008	0.51	-2.9
8,721	+	talB	b0008	0.51	-0.9
8,721	+	talB	b0008	0.51	-0.9
8,729	-	talB	b0008	0.51	-2.4
8,729	-	talB	b0008	0.51	-0.8
8,813	+	talB	b0008	0.60	-0.7
8,830	+	talB	b0008	0.62	-3.2
8,870	+	talB	b0008	0.66	-1.8
8,872	+	talB	b0008	0.66	-1.5
8,934	+	talB	b0008	0.73	-1.5