Strain Fitness in Pseudomonas fluorescens GW456-L13 around PfGW456L13_537

Experiment: Glycerol (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntPfGW456L13_536 and PfGW456L13_537 overlap by 4 nucleotidesPfGW456L13_537 and PfGW456L13_538 overlap by 40 nucleotides PfGW456L13_536 - T1SS secreted agglutinin RTX, at 619,814 to 623,119 _536 PfGW456L13_537 - T1SS secreted agglutinin RTX, at 623,116 to 623,496 _537 PfGW456L13_538 - T1SS secreted agglutinin RTX, at 623,457 to 624,992 _538 Position (kb) 623 624Strain fitness (log2 ratio) -1 0 1at 622.181 kb on - strand, within PfGW456L13_536at 622.181 kb on - strand, within PfGW456L13_536

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Per-strain Table

Position Strand Gene LocusTag Fraction Glycerol (C)
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622,181 - PfGW456L13_536 0.72 +1.0
622,181 - PfGW456L13_536 0.72 +1.4

Or see this region's nucleotide sequence