Experiment: Glycerol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PfGW456L13_5137 and PfGW456L13_5138 are separated by 229 nucleotides PfGW456L13_5138 and PfGW456L13_5139 are separated by 162 nucleotides PfGW456L13_5139 and PfGW456L13_5140 overlap by 11 nucleotides
PfGW456L13_5137 - Transcriptional regulator, LysR family, at 5,735,538 to 5,736,449
_5137
PfGW456L13_5138 - Modulator of drug activity B, at 5,736,679 to 5,737,269
_5138
PfGW456L13_5139 - FIG00959330: hypothetical protein, at 5,737,432 to 5,737,746
_5139
PfGW456L13_5140 - membrane protein, putative, at 5,737,736 to 5,738,500
_5140
Position (kb) 5736
5737
5738 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2 at 5735.833 kb on + strand, within PfGW456L13_5137 at 5735.833 kb on + strand, within PfGW456L13_5137 at 5735.834 kb on - strand, within PfGW456L13_5137 at 5735.834 kb on - strand, within PfGW456L13_5137 at 5735.885 kb on + strand, within PfGW456L13_5137 at 5735.885 kb on + strand, within PfGW456L13_5137 at 5735.885 kb on + strand, within PfGW456L13_5137 at 5735.885 kb on + strand, within PfGW456L13_5137 at 5735.885 kb on + strand, within PfGW456L13_5137 at 5735.885 kb on + strand, within PfGW456L13_5137 at 5735.886 kb on - strand, within PfGW456L13_5137 at 5735.886 kb on - strand, within PfGW456L13_5137 at 5735.886 kb on - strand, within PfGW456L13_5137 at 5735.923 kb on + strand, within PfGW456L13_5137 at 5735.923 kb on + strand, within PfGW456L13_5137 at 5735.936 kb on - strand, within PfGW456L13_5137 at 5736.118 kb on + strand, within PfGW456L13_5137 at 5736.119 kb on - strand, within PfGW456L13_5137 at 5736.119 kb on - strand, within PfGW456L13_5137 at 5736.119 kb on - strand, within PfGW456L13_5137 at 5736.119 kb on - strand, within PfGW456L13_5137 at 5736.119 kb on - strand, within PfGW456L13_5137 at 5736.256 kb on + strand, within PfGW456L13_5137 at 5736.256 kb on + strand, within PfGW456L13_5137 at 5736.256 kb on + strand, within PfGW456L13_5137 at 5736.256 kb on + strand, within PfGW456L13_5137 at 5736.256 kb on + strand, within PfGW456L13_5137 at 5736.257 kb on - strand, within PfGW456L13_5137 at 5736.257 kb on - strand, within PfGW456L13_5137 at 5736.341 kb on + strand, within PfGW456L13_5137 at 5736.341 kb on + strand, within PfGW456L13_5137 at 5736.341 kb on + strand, within PfGW456L13_5137 at 5736.341 kb on + strand, within PfGW456L13_5137 at 5736.342 kb on - strand, within PfGW456L13_5137 at 5736.467 kb on - strand at 5736.483 kb on - strand at 5736.483 kb on - strand at 5736.483 kb on - strand at 5736.593 kb on + strand at 5736.594 kb on - strand at 5736.594 kb on - strand at 5736.594 kb on - strand at 5736.667 kb on - strand at 5736.669 kb on + strand at 5736.669 kb on + strand at 5736.669 kb on + strand at 5736.669 kb on + strand at 5736.669 kb on + strand at 5736.669 kb on + strand at 5736.669 kb on + strand at 5736.669 kb on + strand at 5736.670 kb on - strand at 5736.670 kb on - strand at 5736.670 kb on - strand at 5736.670 kb on - strand at 5736.680 kb on + strand at 5736.680 kb on + strand at 5736.680 kb on + strand at 5736.680 kb on + strand at 5736.681 kb on - strand at 5736.681 kb on - strand at 5736.681 kb on - strand at 5736.681 kb on - strand at 5736.827 kb on + strand, within PfGW456L13_5138 at 5736.827 kb on + strand, within PfGW456L13_5138 at 5736.828 kb on - strand, within PfGW456L13_5138 at 5736.914 kb on + strand, within PfGW456L13_5138 at 5736.914 kb on + strand, within PfGW456L13_5138 at 5736.914 kb on + strand, within PfGW456L13_5138 at 5736.914 kb on + strand, within PfGW456L13_5138 at 5736.914 kb on + strand, within PfGW456L13_5138 at 5736.914 kb on + strand, within PfGW456L13_5138 at 5736.914 kb on + strand, within PfGW456L13_5138 at 5736.914 kb on + strand, within PfGW456L13_5138 at 5736.914 kb on + strand, within PfGW456L13_5138 at 5736.914 kb on + strand, within PfGW456L13_5138 at 5736.914 kb on + strand, within PfGW456L13_5138 at 5736.914 kb on + strand, within PfGW456L13_5138 at 5736.914 kb on + strand, within PfGW456L13_5138 at 5736.914 kb on + strand, within PfGW456L13_5138 at 5736.914 kb on + strand, within PfGW456L13_5138 at 5736.914 kb on + strand, within PfGW456L13_5138 at 5736.914 kb on + strand, within PfGW456L13_5138 at 5736.914 kb on + strand, within PfGW456L13_5138 at 5736.914 kb on + strand, within PfGW456L13_5138 at 5736.914 kb on + strand, within PfGW456L13_5138 at 5736.914 kb on + strand, within PfGW456L13_5138 at 5736.914 kb on + strand, within PfGW456L13_5138 at 5736.915 kb on - strand, within PfGW456L13_5138 at 5736.915 kb on - strand, within PfGW456L13_5138 at 5736.915 kb on - strand, within PfGW456L13_5138 at 5736.915 kb on - strand, within PfGW456L13_5138 at 5736.915 kb on - strand, within PfGW456L13_5138 at 5736.915 kb on - strand, within PfGW456L13_5138 at 5736.915 kb on - strand, within PfGW456L13_5138 at 5736.915 kb on - strand, within PfGW456L13_5138 at 5736.915 kb on - strand, within PfGW456L13_5138 at 5736.915 kb on - strand, within PfGW456L13_5138 at 5736.915 kb on - strand, within PfGW456L13_5138 at 5736.915 kb on - strand, within PfGW456L13_5138 at 5736.915 kb on - strand, within PfGW456L13_5138 at 5736.915 kb on - strand, within PfGW456L13_5138 at 5736.915 kb on - strand, within PfGW456L13_5138 at 5736.915 kb on - strand, within PfGW456L13_5138 at 5736.915 kb on - strand, within PfGW456L13_5138 at 5736.915 kb on - strand, within PfGW456L13_5138 at 5736.915 kb on - strand, within PfGW456L13_5138 at 5736.915 kb on - strand, within PfGW456L13_5138 at 5736.947 kb on + strand, within PfGW456L13_5138 at 5736.948 kb on - strand, within PfGW456L13_5138 at 5736.989 kb on + strand, within PfGW456L13_5138 at 5736.989 kb on + strand, within PfGW456L13_5138 at 5736.989 kb on + strand, within PfGW456L13_5138 at 5736.990 kb on - strand, within PfGW456L13_5138 at 5736.990 kb on - strand, within PfGW456L13_5138 at 5736.990 kb on - strand, within PfGW456L13_5138 at 5737.029 kb on - strand, within PfGW456L13_5138 at 5737.029 kb on - strand, within PfGW456L13_5138 at 5737.077 kb on - strand, within PfGW456L13_5138 at 5737.128 kb on - strand, within PfGW456L13_5138 at 5737.211 kb on + strand at 5737.211 kb on + strand at 5737.310 kb on + strand at 5737.333 kb on - strand at 5737.333 kb on - strand at 5737.333 kb on - strand at 5737.333 kb on - strand at 5737.429 kb on + strand at 5737.429 kb on + strand at 5737.429 kb on + strand at 5737.429 kb on + strand at 5737.429 kb on + strand at 5737.429 kb on + strand at 5737.429 kb on + strand at 5737.429 kb on + strand at 5737.429 kb on + strand at 5737.429 kb on + strand at 5737.429 kb on + strand at 5737.429 kb on + strand at 5737.429 kb on + strand at 5737.429 kb on + strand at 5737.429 kb on + strand at 5737.429 kb on + strand at 5737.429 kb on + strand at 5737.429 kb on + strand at 5737.429 kb on + strand at 5737.429 kb on + strand at 5737.430 kb on - strand at 5737.430 kb on - strand at 5737.430 kb on - strand at 5737.430 kb on - strand at 5737.430 kb on - strand at 5737.430 kb on - strand at 5737.430 kb on - strand at 5737.430 kb on - strand at 5737.430 kb on - strand at 5737.430 kb on - strand at 5737.430 kb on - strand at 5737.513 kb on + strand, within PfGW456L13_5139 at 5737.514 kb on - strand, within PfGW456L13_5139 at 5737.514 kb on - strand, within PfGW456L13_5139 at 5737.597 kb on + strand, within PfGW456L13_5139 at 5737.598 kb on - strand, within PfGW456L13_5139 at 5737.681 kb on + strand, within PfGW456L13_5139 at 5737.682 kb on - strand, within PfGW456L13_5139 at 5737.682 kb on - strand, within PfGW456L13_5139 at 5737.914 kb on - strand, within PfGW456L13_5140 at 5738.008 kb on - strand, within PfGW456L13_5140 at 5738.008 kb on - strand, within PfGW456L13_5140 at 5738.143 kb on - strand, within PfGW456L13_5140 at 5738.143 kb on - strand, within PfGW456L13_5140
Per-strain Table
Position Strand Gene LocusTag Fraction Glycerol (C) remove 5,735,833 + PfGW456L13_5137 0.32 +1.3 5,735,833 + PfGW456L13_5137 0.32 -1.7 5,735,834 - PfGW456L13_5137 0.32 +1.2 5,735,834 - PfGW456L13_5137 0.32 +1.2 5,735,885 + PfGW456L13_5137 0.38 -0.9 5,735,885 + PfGW456L13_5137 0.38 -0.1 5,735,885 + PfGW456L13_5137 0.38 -3.6 5,735,885 + PfGW456L13_5137 0.38 +0.7 5,735,885 + PfGW456L13_5137 0.38 +0.2 5,735,885 + PfGW456L13_5137 0.38 -1.3 5,735,886 - PfGW456L13_5137 0.38 -0.8 5,735,886 - PfGW456L13_5137 0.38 -1.9 5,735,886 - PfGW456L13_5137 0.38 -0.8 5,735,923 + PfGW456L13_5137 0.42 -0.2 5,735,923 + PfGW456L13_5137 0.42 -2.7 5,735,936 - PfGW456L13_5137 0.44 -2.9 5,736,118 + PfGW456L13_5137 0.64 +1.1 5,736,119 - PfGW456L13_5137 0.64 -0.5 5,736,119 - PfGW456L13_5137 0.64 -3.0 5,736,119 - PfGW456L13_5137 0.64 +0.4 5,736,119 - PfGW456L13_5137 0.64 -1.1 5,736,119 - PfGW456L13_5137 0.64 +1.4 5,736,256 + PfGW456L13_5137 0.79 +0.2 5,736,256 + PfGW456L13_5137 0.79 +0.9 5,736,256 + PfGW456L13_5137 0.79 -0.3 5,736,256 + PfGW456L13_5137 0.79 +1.2 5,736,256 + PfGW456L13_5137 0.79 -0.6 5,736,257 - PfGW456L13_5137 0.79 -1.0 5,736,257 - PfGW456L13_5137 0.79 -0.3 5,736,341 + PfGW456L13_5137 0.88 +1.2 5,736,341 + PfGW456L13_5137 0.88 +1.0 5,736,341 + PfGW456L13_5137 0.88 +2.4 5,736,341 + PfGW456L13_5137 0.88 -3.3 5,736,342 - PfGW456L13_5137 0.88 +0.2 5,736,467 - -0.6 5,736,483 - +1.2 5,736,483 - +0.7 5,736,483 - +0.2 5,736,593 + -1.2 5,736,594 - +1.7 5,736,594 - +0.3 5,736,594 - +0.1 5,736,667 - -0.6 5,736,669 + +0.2 5,736,669 + +1.4 5,736,669 + -2.6 5,736,669 + +0.2 5,736,669 + +1.4 5,736,669 + +1.4 5,736,669 + -1.3 5,736,669 + +0.3 5,736,670 - +0.3 5,736,670 - +0.1 5,736,670 - -0.5 5,736,670 - -0.4 5,736,680 + -0.9 5,736,680 + +0.2 5,736,680 + -1.7 5,736,680 + -1.7 5,736,681 - +0.1 5,736,681 - -1.1 5,736,681 - +0.3 5,736,681 - -1.5 5,736,827 + PfGW456L13_5138 0.25 +1.1 5,736,827 + PfGW456L13_5138 0.25 -1.0 5,736,828 - PfGW456L13_5138 0.25 +0.2 5,736,914 + PfGW456L13_5138 0.40 -0.7 5,736,914 + PfGW456L13_5138 0.40 -1.5 5,736,914 + PfGW456L13_5138 0.40 +0.1 5,736,914 + PfGW456L13_5138 0.40 -1.0 5,736,914 + PfGW456L13_5138 0.40 +1.2 5,736,914 + PfGW456L13_5138 0.40 +0.4 5,736,914 + PfGW456L13_5138 0.40 +0.6 5,736,914 + PfGW456L13_5138 0.40 +1.4 5,736,914 + PfGW456L13_5138 0.40 -0.6 5,736,914 + PfGW456L13_5138 0.40 +1.1 5,736,914 + PfGW456L13_5138 0.40 +1.0 5,736,914 + PfGW456L13_5138 0.40 -0.9 5,736,914 + PfGW456L13_5138 0.40 +0.0 5,736,914 + PfGW456L13_5138 0.40 -0.0 5,736,914 + PfGW456L13_5138 0.40 +0.5 5,736,914 + PfGW456L13_5138 0.40 -0.7 5,736,914 + PfGW456L13_5138 0.40 +0.0 5,736,914 + PfGW456L13_5138 0.40 -1.3 5,736,914 + PfGW456L13_5138 0.40 +1.5 5,736,914 + PfGW456L13_5138 0.40 -0.5 5,736,914 + PfGW456L13_5138 0.40 -0.9 5,736,914 + PfGW456L13_5138 0.40 -0.8 5,736,915 - PfGW456L13_5138 0.40 +1.0 5,736,915 - PfGW456L13_5138 0.40 +0.5 5,736,915 - PfGW456L13_5138 0.40 -0.4 5,736,915 - PfGW456L13_5138 0.40 +0.6 5,736,915 - PfGW456L13_5138 0.40 +0.9 5,736,915 - PfGW456L13_5138 0.40 -0.5 5,736,915 - PfGW456L13_5138 0.40 +0.2 5,736,915 - PfGW456L13_5138 0.40 -2.1 5,736,915 - PfGW456L13_5138 0.40 -2.6 5,736,915 - PfGW456L13_5138 0.40 +1.2 5,736,915 - PfGW456L13_5138 0.40 -0.7 5,736,915 - PfGW456L13_5138 0.40 +0.8 5,736,915 - PfGW456L13_5138 0.40 -1.0 5,736,915 - PfGW456L13_5138 0.40 +0.2 5,736,915 - PfGW456L13_5138 0.40 +0.8 5,736,915 - PfGW456L13_5138 0.40 -2.5 5,736,915 - PfGW456L13_5138 0.40 -1.8 5,736,915 - PfGW456L13_5138 0.40 +1.3 5,736,915 - PfGW456L13_5138 0.40 -0.7 5,736,915 - PfGW456L13_5138 0.40 +0.2 5,736,947 + PfGW456L13_5138 0.45 -0.9 5,736,948 - PfGW456L13_5138 0.46 -0.6 5,736,989 + PfGW456L13_5138 0.52 +0.6 5,736,989 + PfGW456L13_5138 0.52 +1.0 5,736,989 + PfGW456L13_5138 0.52 -2.2 5,736,990 - PfGW456L13_5138 0.53 -2.5 5,736,990 - PfGW456L13_5138 0.53 +0.6 5,736,990 - PfGW456L13_5138 0.53 -0.5 5,737,029 - PfGW456L13_5138 0.59 +0.7 5,737,029 - PfGW456L13_5138 0.59 +0.4 5,737,077 - PfGW456L13_5138 0.67 +1.5 5,737,128 - PfGW456L13_5138 0.76 -0.3 5,737,211 + +0.3 5,737,211 + +0.4 5,737,310 + -0.1 5,737,333 - +1.3 5,737,333 - +1.3 5,737,333 - -1.3 5,737,333 - +1.9 5,737,429 + +0.0 5,737,429 + +1.0 5,737,429 + -0.2 5,737,429 + -4.2 5,737,429 + -0.1 5,737,429 + -0.0 5,737,429 + +0.0 5,737,429 + +1.4 5,737,429 + -0.5 5,737,429 + -2.5 5,737,429 + +0.8 5,737,429 + +0.2 5,737,429 + +0.3 5,737,429 + +1.4 5,737,429 + +1.1 5,737,429 + +0.1 5,737,429 + -0.2 5,737,429 + -0.2 5,737,429 + -0.6 5,737,429 + +2.4 5,737,430 - -1.6 5,737,430 - -1.2 5,737,430 - +1.1 5,737,430 - +0.8 5,737,430 - -0.1 5,737,430 - -1.6 5,737,430 - -0.3 5,737,430 - +0.4 5,737,430 - -0.5 5,737,430 - -1.2 5,737,430 - -0.2 5,737,513 + PfGW456L13_5139 0.26 -0.0 5,737,514 - PfGW456L13_5139 0.26 +1.1 5,737,514 - PfGW456L13_5139 0.26 -1.1 5,737,597 + PfGW456L13_5139 0.52 +0.2 5,737,598 - PfGW456L13_5139 0.53 +2.2 5,737,681 + PfGW456L13_5139 0.79 -1.0 5,737,682 - PfGW456L13_5139 0.79 +0.0 5,737,682 - PfGW456L13_5139 0.79 -0.9 5,737,914 - PfGW456L13_5140 0.23 -1.7 5,738,008 - PfGW456L13_5140 0.36 +0.1 5,738,008 - PfGW456L13_5140 0.36 -0.6 5,738,143 - PfGW456L13_5140 0.53 +0.0 5,738,143 - PfGW456L13_5140 0.53 -0.7
Or see this region's nucleotide sequence