Experiment: m.b. Lomefloxacin 0.025 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_4589 and Echvi_4590 are separated by 224 nucleotides Echvi_4590 and Echvi_4591 are separated by 38 nucleotides
Echvi_4589: Echvi_4589 - MoxR-like ATPases, at 5,496,243 to 5,497,169
_4589
Echvi_4590: Echvi_4590 - Arylsulfatase A and related enzymes, at 5,497,394 to 5,498,905
_4590
Echvi_4591: Echvi_4591 - Arylsulfatase A and related enzymes, at 5,498,944 to 5,500,443
_4591
Position (kb) 5497
5498
5499 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 5496.435 kb on + strand, within Echvi_4589 at 5496.490 kb on + strand, within Echvi_4589 at 5496.519 kb on - strand, within Echvi_4589 at 5496.525 kb on + strand, within Echvi_4589 at 5496.526 kb on - strand, within Echvi_4589 at 5496.531 kb on - strand, within Echvi_4589 at 5496.532 kb on + strand, within Echvi_4589 at 5496.742 kb on + strand, within Echvi_4589 at 5496.917 kb on + strand, within Echvi_4589 at 5497.124 kb on + strand at 5497.143 kb on - strand at 5497.154 kb on + strand at 5497.178 kb on + strand at 5497.210 kb on + strand at 5497.210 kb on + strand at 5497.210 kb on + strand at 5497.211 kb on - strand at 5497.211 kb on - strand at 5497.232 kb on - strand at 5497.254 kb on - strand at 5497.290 kb on + strand at 5497.375 kb on - strand at 5497.528 kb on + strand at 5497.528 kb on + strand at 5497.529 kb on - strand at 5497.539 kb on + strand at 5497.539 kb on + strand at 5497.551 kb on + strand, within Echvi_4590 at 5497.551 kb on + strand, within Echvi_4590 at 5497.551 kb on + strand, within Echvi_4590 at 5497.551 kb on + strand, within Echvi_4590 at 5497.551 kb on + strand, within Echvi_4590 at 5497.551 kb on + strand, within Echvi_4590 at 5497.551 kb on + strand, within Echvi_4590 at 5497.551 kb on + strand, within Echvi_4590 at 5497.551 kb on + strand, within Echvi_4590 at 5497.551 kb on + strand, within Echvi_4590 at 5497.551 kb on + strand, within Echvi_4590 at 5497.552 kb on - strand, within Echvi_4590 at 5497.552 kb on - strand, within Echvi_4590 at 5497.552 kb on - strand, within Echvi_4590 at 5497.592 kb on + strand, within Echvi_4590 at 5497.592 kb on + strand, within Echvi_4590 at 5497.643 kb on - strand, within Echvi_4590 at 5497.660 kb on + strand, within Echvi_4590 at 5497.678 kb on + strand, within Echvi_4590 at 5497.679 kb on - strand, within Echvi_4590 at 5497.684 kb on - strand, within Echvi_4590 at 5497.697 kb on + strand, within Echvi_4590 at 5497.698 kb on - strand, within Echvi_4590 at 5497.702 kb on + strand, within Echvi_4590 at 5497.774 kb on + strand, within Echvi_4590 at 5497.774 kb on + strand at 5497.774 kb on + strand, within Echvi_4590 at 5497.774 kb on + strand, within Echvi_4590 at 5497.774 kb on + strand, within Echvi_4590 at 5497.774 kb on + strand, within Echvi_4590 at 5497.774 kb on + strand, within Echvi_4590 at 5497.774 kb on + strand, within Echvi_4590 at 5497.774 kb on + strand, within Echvi_4590 at 5497.774 kb on + strand, within Echvi_4590 at 5497.775 kb on - strand, within Echvi_4590 at 5497.775 kb on - strand, within Echvi_4590 at 5497.775 kb on - strand, within Echvi_4590 at 5497.775 kb on - strand, within Echvi_4590 at 5497.777 kb on + strand, within Echvi_4590 at 5497.777 kb on + strand, within Echvi_4590 at 5497.777 kb on + strand, within Echvi_4590 at 5497.777 kb on + strand, within Echvi_4590 at 5497.777 kb on + strand, within Echvi_4590 at 5497.778 kb on - strand, within Echvi_4590 at 5497.780 kb on - strand, within Echvi_4590 at 5497.780 kb on - strand, within Echvi_4590 at 5497.822 kb on - strand, within Echvi_4590 at 5497.847 kb on - strand, within Echvi_4590 at 5497.885 kb on + strand, within Echvi_4590 at 5497.909 kb on + strand, within Echvi_4590 at 5497.910 kb on - strand, within Echvi_4590 at 5497.913 kb on + strand, within Echvi_4590 at 5498.011 kb on + strand, within Echvi_4590 at 5498.011 kb on + strand, within Echvi_4590 at 5498.011 kb on + strand, within Echvi_4590 at 5498.053 kb on + strand, within Echvi_4590 at 5498.054 kb on - strand, within Echvi_4590 at 5498.058 kb on + strand, within Echvi_4590 at 5498.058 kb on + strand, within Echvi_4590 at 5498.097 kb on - strand, within Echvi_4590 at 5498.209 kb on + strand, within Echvi_4590 at 5498.209 kb on + strand, within Echvi_4590 at 5498.419 kb on - strand, within Echvi_4590 at 5498.419 kb on - strand, within Echvi_4590 at 5498.419 kb on - strand, within Echvi_4590 at 5498.421 kb on + strand, within Echvi_4590 at 5498.447 kb on - strand, within Echvi_4590 at 5498.618 kb on - strand, within Echvi_4590 at 5498.642 kb on - strand, within Echvi_4590 at 5498.658 kb on - strand, within Echvi_4590 at 5498.683 kb on + strand, within Echvi_4590 at 5498.757 kb on + strand at 5498.758 kb on - strand at 5498.885 kb on + strand at 5498.885 kb on + strand at 5498.889 kb on - strand at 5498.891 kb on + strand at 5499.006 kb on + strand at 5499.058 kb on + strand at 5499.071 kb on + strand at 5499.072 kb on - strand at 5499.072 kb on - strand at 5499.075 kb on - strand at 5499.301 kb on + strand, within Echvi_4591 at 5499.310 kb on - strand, within Echvi_4591 at 5499.310 kb on - strand, within Echvi_4591 at 5499.408 kb on + strand, within Echvi_4591 at 5499.409 kb on - strand, within Echvi_4591 at 5499.409 kb on - strand, within Echvi_4591 at 5499.412 kb on + strand, within Echvi_4591 at 5499.412 kb on + strand, within Echvi_4591 at 5499.413 kb on - strand, within Echvi_4591 at 5499.425 kb on - strand, within Echvi_4591 at 5499.585 kb on + strand, within Echvi_4591 at 5499.588 kb on + strand, within Echvi_4591 at 5499.589 kb on - strand, within Echvi_4591 at 5499.590 kb on + strand, within Echvi_4591 at 5499.590 kb on + strand, within Echvi_4591 at 5499.590 kb on + strand, within Echvi_4591 at 5499.591 kb on - strand, within Echvi_4591 at 5499.591 kb on - strand, within Echvi_4591 at 5499.591 kb on - strand, within Echvi_4591 at 5499.603 kb on + strand, within Echvi_4591 at 5499.604 kb on - strand, within Echvi_4591 at 5499.710 kb on + strand, within Echvi_4591 at 5499.710 kb on + strand, within Echvi_4591 at 5499.710 kb on + strand, within Echvi_4591 at 5499.711 kb on - strand, within Echvi_4591 at 5499.711 kb on - strand, within Echvi_4591 at 5499.721 kb on + strand, within Echvi_4591 at 5499.753 kb on + strand, within Echvi_4591 at 5499.810 kb on + strand, within Echvi_4591 at 5499.810 kb on + strand, within Echvi_4591 at 5499.897 kb on + strand, within Echvi_4591
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Lomefloxacin 0.025 mM remove 5,496,435 + Echvi_4589 0.21 +0.3 5,496,490 + Echvi_4589 0.27 +0.8 5,496,519 - Echvi_4589 0.30 -1.4 5,496,525 + Echvi_4589 0.30 -0.4 5,496,526 - Echvi_4589 0.31 -0.3 5,496,531 - Echvi_4589 0.31 -1.0 5,496,532 + Echvi_4589 0.31 -1.1 5,496,742 + Echvi_4589 0.54 +0.1 5,496,917 + Echvi_4589 0.73 +1.3 5,497,124 + -1.6 5,497,143 - +0.3 5,497,154 + +0.6 5,497,178 + +0.0 5,497,210 + -0.0 5,497,210 + -0.9 5,497,210 + -0.3 5,497,211 - -0.3 5,497,211 - -0.5 5,497,232 - +0.0 5,497,254 - +0.0 5,497,290 + -0.5 5,497,375 - -0.2 5,497,528 + -0.4 5,497,528 + -0.3 5,497,529 - +0.5 5,497,539 + -2.0 5,497,539 + +0.7 5,497,551 + Echvi_4590 0.10 +0.3 5,497,551 + Echvi_4590 0.10 -0.7 5,497,551 + Echvi_4590 0.10 +0.8 5,497,551 + Echvi_4590 0.10 +0.0 5,497,551 + Echvi_4590 0.10 -0.5 5,497,551 + Echvi_4590 0.10 -0.0 5,497,551 + Echvi_4590 0.10 -0.9 5,497,551 + Echvi_4590 0.10 +0.0 5,497,551 + Echvi_4590 0.10 -0.7 5,497,551 + Echvi_4590 0.10 +1.0 5,497,551 + Echvi_4590 0.10 +0.2 5,497,552 - Echvi_4590 0.10 -0.7 5,497,552 - Echvi_4590 0.10 -1.1 5,497,552 - Echvi_4590 0.10 -1.6 5,497,592 + Echvi_4590 0.13 -0.9 5,497,592 + Echvi_4590 0.13 -1.5 5,497,643 - Echvi_4590 0.16 -0.8 5,497,660 + Echvi_4590 0.18 +0.0 5,497,678 + Echvi_4590 0.19 -0.9 5,497,679 - Echvi_4590 0.19 -1.3 5,497,684 - Echvi_4590 0.19 +0.6 5,497,697 + Echvi_4590 0.20 -0.1 5,497,698 - Echvi_4590 0.20 -2.1 5,497,702 + Echvi_4590 0.20 +0.4 5,497,774 + Echvi_4590 0.25 -1.7 5,497,774 + +2.0 5,497,774 + Echvi_4590 0.25 -2.0 5,497,774 + Echvi_4590 0.25 +1.4 5,497,774 + Echvi_4590 0.25 -1.3 5,497,774 + Echvi_4590 0.25 -1.0 5,497,774 + Echvi_4590 0.25 -0.0 5,497,774 + Echvi_4590 0.25 -0.4 5,497,774 + Echvi_4590 0.25 -2.7 5,497,774 + Echvi_4590 0.25 -0.7 5,497,775 - Echvi_4590 0.25 -1.7 5,497,775 - Echvi_4590 0.25 +0.9 5,497,775 - Echvi_4590 0.25 +0.3 5,497,775 - Echvi_4590 0.25 -0.5 5,497,777 + Echvi_4590 0.25 -0.5 5,497,777 + Echvi_4590 0.25 +0.7 5,497,777 + Echvi_4590 0.25 +2.0 5,497,777 + Echvi_4590 0.25 -0.1 5,497,777 + Echvi_4590 0.25 -0.8 5,497,778 - Echvi_4590 0.25 -0.1 5,497,780 - Echvi_4590 0.26 +1.5 5,497,780 - Echvi_4590 0.26 +0.7 5,497,822 - Echvi_4590 0.28 -2.0 5,497,847 - Echvi_4590 0.30 -1.5 5,497,885 + Echvi_4590 0.32 -1.4 5,497,909 + Echvi_4590 0.34 -0.2 5,497,910 - Echvi_4590 0.34 +0.9 5,497,913 + Echvi_4590 0.34 +0.4 5,498,011 + Echvi_4590 0.41 -0.3 5,498,011 + Echvi_4590 0.41 +0.9 5,498,011 + Echvi_4590 0.41 -0.5 5,498,053 + Echvi_4590 0.44 -1.7 5,498,054 - Echvi_4590 0.44 +0.6 5,498,058 + Echvi_4590 0.44 -0.7 5,498,058 + Echvi_4590 0.44 +0.5 5,498,097 - Echvi_4590 0.46 -2.0 5,498,209 + Echvi_4590 0.54 -1.0 5,498,209 + Echvi_4590 0.54 -0.1 5,498,419 - Echvi_4590 0.68 -0.2 5,498,419 - Echvi_4590 0.68 +1.3 5,498,419 - Echvi_4590 0.68 +0.8 5,498,421 + Echvi_4590 0.68 +0.1 5,498,447 - Echvi_4590 0.70 -0.2 5,498,618 - Echvi_4590 0.81 -1.0 5,498,642 - Echvi_4590 0.83 -0.5 5,498,658 - Echvi_4590 0.84 -0.5 5,498,683 + Echvi_4590 0.85 -0.3 5,498,757 + +2.0 5,498,758 - +1.5 5,498,885 + +3.0 5,498,885 + +2.0 5,498,889 - +0.4 5,498,891 + -2.0 5,499,006 + -1.1 5,499,058 + -0.8 5,499,071 + -0.1 5,499,072 - -0.5 5,499,072 - -0.1 5,499,075 - +0.4 5,499,301 + Echvi_4591 0.24 -0.3 5,499,310 - Echvi_4591 0.24 -0.8 5,499,310 - Echvi_4591 0.24 +0.5 5,499,408 + Echvi_4591 0.31 +1.0 5,499,409 - Echvi_4591 0.31 +0.8 5,499,409 - Echvi_4591 0.31 +0.6 5,499,412 + Echvi_4591 0.31 -0.4 5,499,412 + Echvi_4591 0.31 -1.4 5,499,413 - Echvi_4591 0.31 -1.3 5,499,425 - Echvi_4591 0.32 -0.2 5,499,585 + Echvi_4591 0.43 -1.8 5,499,588 + Echvi_4591 0.43 +0.8 5,499,589 - Echvi_4591 0.43 -0.8 5,499,590 + Echvi_4591 0.43 +0.6 5,499,590 + Echvi_4591 0.43 -1.4 5,499,590 + Echvi_4591 0.43 +1.0 5,499,591 - Echvi_4591 0.43 -0.1 5,499,591 - Echvi_4591 0.43 -0.3 5,499,591 - Echvi_4591 0.43 +0.3 5,499,603 + Echvi_4591 0.44 +1.8 5,499,604 - Echvi_4591 0.44 +0.7 5,499,710 + Echvi_4591 0.51 -0.9 5,499,710 + Echvi_4591 0.51 +0.0 5,499,710 + Echvi_4591 0.51 -0.3 5,499,711 - Echvi_4591 0.51 +1.4 5,499,711 - Echvi_4591 0.51 -0.4 5,499,721 + Echvi_4591 0.52 +0.8 5,499,753 + Echvi_4591 0.54 -0.5 5,499,810 + Echvi_4591 0.58 +0.5 5,499,810 + Echvi_4591 0.58 +0.4 5,499,897 + Echvi_4591 0.64 -2.5
Or see this region's nucleotide sequence