Experiment: m.b. Lomefloxacin 0.025 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_3836 and Echvi_3837 are separated by 206 nucleotides Echvi_3837 and Echvi_3838 are separated by 93 nucleotides
Echvi_3836: Echvi_3836 - FOG: Transposase and inactivated derivatives, at 4,585,346 to 4,586,578
_3836
Echvi_3837: Echvi_3837 - chromosome segregation protein SMC, common bacterial type, at 4,586,785 to 4,590,339
_3837
Echvi_3838: Echvi_3838 - Fe-S oxidoreductase, at 4,590,433 to 4,592,607
_3838
Position (kb)
4586
4587
4588
4589
4590
4591 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 4586.762 kb on + strand at 4586.782 kb on + strand at 4586.782 kb on + strand at 4586.783 kb on - strand at 4586.783 kb on - strand at 4586.783 kb on - strand at 4586.785 kb on - strand at 4586.785 kb on - strand at 4586.817 kb on + strand at 4586.874 kb on - strand at 4587.067 kb on + strand at 4587.197 kb on - strand, within Echvi_3837 at 4587.197 kb on - strand, within Echvi_3837 at 4587.282 kb on + strand, within Echvi_3837 at 4587.366 kb on - strand, within Echvi_3837 at 4587.366 kb on - strand, within Echvi_3837 at 4587.371 kb on - strand, within Echvi_3837 at 4587.371 kb on - strand, within Echvi_3837 at 4587.390 kb on - strand, within Echvi_3837 at 4587.427 kb on + strand, within Echvi_3837 at 4587.513 kb on + strand, within Echvi_3837 at 4587.513 kb on + strand, within Echvi_3837 at 4587.514 kb on - strand, within Echvi_3837 at 4587.514 kb on - strand, within Echvi_3837 at 4587.557 kb on + strand, within Echvi_3837 at 4587.557 kb on + strand, within Echvi_3837 at 4587.654 kb on - strand, within Echvi_3837 at 4587.740 kb on + strand, within Echvi_3837 at 4587.772 kb on - strand, within Echvi_3837 at 4587.946 kb on + strand, within Echvi_3837 at 4587.947 kb on - strand, within Echvi_3837 at 4588.004 kb on + strand, within Echvi_3837 at 4588.004 kb on + strand, within Echvi_3837 at 4588.005 kb on - strand, within Echvi_3837 at 4588.010 kb on + strand, within Echvi_3837 at 4588.284 kb on - strand, within Echvi_3837 at 4588.398 kb on - strand, within Echvi_3837 at 4588.433 kb on - strand, within Echvi_3837 at 4588.433 kb on - strand, within Echvi_3837 at 4588.627 kb on + strand, within Echvi_3837 at 4588.627 kb on + strand, within Echvi_3837 at 4588.627 kb on + strand, within Echvi_3837 at 4588.627 kb on + strand, within Echvi_3837 at 4588.627 kb on + strand, within Echvi_3837 at 4588.627 kb on + strand, within Echvi_3837 at 4588.628 kb on - strand, within Echvi_3837 at 4588.628 kb on - strand, within Echvi_3837 at 4588.628 kb on - strand, within Echvi_3837 at 4588.628 kb on - strand, within Echvi_3837 at 4588.645 kb on + strand, within Echvi_3837 at 4588.645 kb on + strand, within Echvi_3837 at 4588.818 kb on - strand, within Echvi_3837 at 4588.818 kb on - strand, within Echvi_3837 at 4588.891 kb on - strand, within Echvi_3837 at 4588.903 kb on + strand, within Echvi_3837 at 4588.916 kb on + strand, within Echvi_3837 at 4588.917 kb on - strand, within Echvi_3837 at 4588.957 kb on + strand, within Echvi_3837 at 4588.957 kb on + strand, within Echvi_3837 at 4588.957 kb on + strand, within Echvi_3837 at 4588.958 kb on - strand, within Echvi_3837 at 4588.958 kb on - strand, within Echvi_3837 at 4588.959 kb on + strand, within Echvi_3837 at 4588.959 kb on + strand, within Echvi_3837 at 4588.960 kb on - strand, within Echvi_3837 at 4588.960 kb on - strand, within Echvi_3837 at 4588.960 kb on - strand, within Echvi_3837 at 4589.004 kb on + strand, within Echvi_3837 at 4589.043 kb on - strand, within Echvi_3837 at 4589.072 kb on + strand, within Echvi_3837 at 4589.072 kb on + strand, within Echvi_3837 at 4589.188 kb on + strand, within Echvi_3837 at 4589.188 kb on + strand, within Echvi_3837 at 4589.189 kb on - strand, within Echvi_3837 at 4589.189 kb on - strand, within Echvi_3837 at 4589.209 kb on + strand, within Echvi_3837 at 4589.209 kb on + strand, within Echvi_3837 at 4589.389 kb on + strand, within Echvi_3837 at 4589.389 kb on + strand, within Echvi_3837 at 4589.421 kb on - strand, within Echvi_3837 at 4589.484 kb on - strand, within Echvi_3837 at 4589.594 kb on + strand, within Echvi_3837 at 4589.594 kb on + strand, within Echvi_3837 at 4589.667 kb on + strand, within Echvi_3837 at 4589.753 kb on - strand, within Echvi_3837 at 4590.077 kb on + strand at 4590.077 kb on + strand at 4590.091 kb on + strand at 4590.256 kb on + strand at 4590.257 kb on - strand at 4590.324 kb on + strand at 4590.337 kb on + strand at 4590.356 kb on + strand at 4590.356 kb on + strand at 4590.361 kb on + strand at 4590.361 kb on + strand at 4590.361 kb on + strand at 4590.362 kb on - strand at 4590.362 kb on - strand at 4590.425 kb on - strand at 4590.429 kb on + strand at 4590.430 kb on - strand at 4590.765 kb on + strand, within Echvi_3838 at 4590.767 kb on + strand, within Echvi_3838 at 4590.848 kb on + strand, within Echvi_3838 at 4590.853 kb on - strand, within Echvi_3838 at 4590.914 kb on + strand, within Echvi_3838 at 4590.948 kb on + strand, within Echvi_3838 at 4590.948 kb on + strand, within Echvi_3838 at 4590.948 kb on + strand, within Echvi_3838 at 4590.948 kb on + strand, within Echvi_3838 at 4590.958 kb on - strand, within Echvi_3838 at 4591.039 kb on + strand, within Echvi_3838 at 4591.057 kb on + strand, within Echvi_3838 at 4591.118 kb on + strand, within Echvi_3838 at 4591.118 kb on + strand, within Echvi_3838 at 4591.118 kb on + strand, within Echvi_3838 at 4591.118 kb on + strand, within Echvi_3838 at 4591.119 kb on - strand, within Echvi_3838 at 4591.119 kb on - strand, within Echvi_3838 at 4591.119 kb on - strand, within Echvi_3838 at 4591.119 kb on - strand, within Echvi_3838 at 4591.119 kb on - strand, within Echvi_3838 at 4591.119 kb on - strand, within Echvi_3838 at 4591.119 kb on - strand, within Echvi_3838 at 4591.127 kb on + strand, within Echvi_3838 at 4591.127 kb on + strand, within Echvi_3838 at 4591.127 kb on + strand, within Echvi_3838 at 4591.128 kb on - strand, within Echvi_3838 at 4591.168 kb on + strand, within Echvi_3838 at 4591.257 kb on + strand, within Echvi_3838 at 4591.258 kb on - strand, within Echvi_3838 at 4591.330 kb on + strand, within Echvi_3838 at 4591.330 kb on + strand, within Echvi_3838 at 4591.331 kb on - strand, within Echvi_3838 at 4591.331 kb on - strand, within Echvi_3838 at 4591.331 kb on - strand, within Echvi_3838 at 4591.337 kb on - strand, within Echvi_3838
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Lomefloxacin 0.025 mM remove 4,586,762 + -1.1 4,586,782 + -1.0 4,586,782 + +0.7 4,586,783 - -0.1 4,586,783 - -0.8 4,586,783 - -0.1 4,586,785 - -1.1 4,586,785 - -1.6 4,586,817 + -0.2 4,586,874 - +0.7 4,587,067 + -0.5 4,587,197 - Echvi_3837 0.12 -0.5 4,587,197 - Echvi_3837 0.12 -0.9 4,587,282 + Echvi_3837 0.14 +0.0 4,587,366 - Echvi_3837 0.16 +1.2 4,587,366 - Echvi_3837 0.16 +0.3 4,587,371 - Echvi_3837 0.16 +0.3 4,587,371 - Echvi_3837 0.16 +0.5 4,587,390 - Echvi_3837 0.17 -1.7 4,587,427 + Echvi_3837 0.18 +1.5 4,587,513 + Echvi_3837 0.20 +0.5 4,587,513 + Echvi_3837 0.20 +0.1 4,587,514 - Echvi_3837 0.21 +0.8 4,587,514 - Echvi_3837 0.21 -1.2 4,587,557 + Echvi_3837 0.22 -1.7 4,587,557 + Echvi_3837 0.22 -0.6 4,587,654 - Echvi_3837 0.24 -1.5 4,587,740 + Echvi_3837 0.27 +2.3 4,587,772 - Echvi_3837 0.28 -2.1 4,587,946 + Echvi_3837 0.33 -2.5 4,587,947 - Echvi_3837 0.33 +0.4 4,588,004 + Echvi_3837 0.34 -1.1 4,588,004 + Echvi_3837 0.34 -0.0 4,588,005 - Echvi_3837 0.34 +0.7 4,588,010 + Echvi_3837 0.34 -0.7 4,588,284 - Echvi_3837 0.42 +0.2 4,588,398 - Echvi_3837 0.45 +0.4 4,588,433 - Echvi_3837 0.46 +0.1 4,588,433 - Echvi_3837 0.46 -1.6 4,588,627 + Echvi_3837 0.52 -0.9 4,588,627 + Echvi_3837 0.52 -1.2 4,588,627 + Echvi_3837 0.52 -1.4 4,588,627 + Echvi_3837 0.52 -0.2 4,588,627 + Echvi_3837 0.52 -1.2 4,588,627 + Echvi_3837 0.52 +0.6 4,588,628 - Echvi_3837 0.52 -2.0 4,588,628 - Echvi_3837 0.52 -0.9 4,588,628 - Echvi_3837 0.52 -0.7 4,588,628 - Echvi_3837 0.52 +0.7 4,588,645 + Echvi_3837 0.52 +1.7 4,588,645 + Echvi_3837 0.52 -0.9 4,588,818 - Echvi_3837 0.57 -1.1 4,588,818 - Echvi_3837 0.57 +0.2 4,588,891 - Echvi_3837 0.59 -0.3 4,588,903 + Echvi_3837 0.60 -0.7 4,588,916 + Echvi_3837 0.60 -0.8 4,588,917 - Echvi_3837 0.60 +0.1 4,588,957 + Echvi_3837 0.61 -0.1 4,588,957 + Echvi_3837 0.61 +0.7 4,588,957 + Echvi_3837 0.61 -0.3 4,588,958 - Echvi_3837 0.61 -1.0 4,588,958 - Echvi_3837 0.61 -0.0 4,588,959 + Echvi_3837 0.61 -0.5 4,588,959 + Echvi_3837 0.61 +2.3 4,588,960 - Echvi_3837 0.61 +0.3 4,588,960 - Echvi_3837 0.61 -0.1 4,588,960 - Echvi_3837 0.61 +0.4 4,589,004 + Echvi_3837 0.62 -1.1 4,589,043 - Echvi_3837 0.64 -0.3 4,589,072 + Echvi_3837 0.64 -0.4 4,589,072 + Echvi_3837 0.64 -1.2 4,589,188 + Echvi_3837 0.68 -0.7 4,589,188 + Echvi_3837 0.68 +0.2 4,589,189 - Echvi_3837 0.68 +0.3 4,589,189 - Echvi_3837 0.68 -0.0 4,589,209 + Echvi_3837 0.68 +0.1 4,589,209 + Echvi_3837 0.68 +0.2 4,589,389 + Echvi_3837 0.73 -0.1 4,589,389 + Echvi_3837 0.73 +2.0 4,589,421 - Echvi_3837 0.74 +0.3 4,589,484 - Echvi_3837 0.76 -0.2 4,589,594 + Echvi_3837 0.79 -1.0 4,589,594 + Echvi_3837 0.79 -0.7 4,589,667 + Echvi_3837 0.81 -0.0 4,589,753 - Echvi_3837 0.83 -1.4 4,590,077 + +0.3 4,590,077 + -1.2 4,590,091 + -1.3 4,590,256 + -0.5 4,590,257 - +0.8 4,590,324 + -0.3 4,590,337 + +2.6 4,590,356 + +3.0 4,590,356 + -1.4 4,590,361 + +0.7 4,590,361 + +0.0 4,590,361 + +0.0 4,590,362 - +0.4 4,590,362 - -0.9 4,590,425 - -0.4 4,590,429 + +0.5 4,590,430 - +0.3 4,590,765 + Echvi_3838 0.15 -0.4 4,590,767 + Echvi_3838 0.15 +0.7 4,590,848 + Echvi_3838 0.19 -0.0 4,590,853 - Echvi_3838 0.19 +1.3 4,590,914 + Echvi_3838 0.22 +2.6 4,590,948 + Echvi_3838 0.24 -1.5 4,590,948 + Echvi_3838 0.24 -0.5 4,590,948 + Echvi_3838 0.24 -0.8 4,590,948 + Echvi_3838 0.24 +1.1 4,590,958 - Echvi_3838 0.24 +0.7 4,591,039 + Echvi_3838 0.28 +0.6 4,591,057 + Echvi_3838 0.29 -0.3 4,591,118 + Echvi_3838 0.31 -0.3 4,591,118 + Echvi_3838 0.31 -0.3 4,591,118 + Echvi_3838 0.31 +0.0 4,591,118 + Echvi_3838 0.31 +0.0 4,591,119 - Echvi_3838 0.32 -1.5 4,591,119 - Echvi_3838 0.32 -0.0 4,591,119 - Echvi_3838 0.32 -0.9 4,591,119 - Echvi_3838 0.32 +0.5 4,591,119 - Echvi_3838 0.32 +0.1 4,591,119 - Echvi_3838 0.32 -1.0 4,591,119 - Echvi_3838 0.32 +0.3 4,591,127 + Echvi_3838 0.32 +0.7 4,591,127 + Echvi_3838 0.32 +0.1 4,591,127 + Echvi_3838 0.32 +0.6 4,591,128 - Echvi_3838 0.32 -0.5 4,591,168 + Echvi_3838 0.34 -0.1 4,591,257 + Echvi_3838 0.38 -0.2 4,591,258 - Echvi_3838 0.38 -2.5 4,591,330 + Echvi_3838 0.41 -0.1 4,591,330 + Echvi_3838 0.41 -0.1 4,591,331 - Echvi_3838 0.41 -0.9 4,591,331 - Echvi_3838 0.41 -1.7 4,591,331 - Echvi_3838 0.41 -2.9 4,591,337 - Echvi_3838 0.42 -0.0
Or see this region's nucleotide sequence