Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_2688

Experiment: m.b. Lomefloxacin 0.025 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Lomefloxacin 0.025 mM
3,192,702	+		Echvi_2686	0.55	+0.6
3,192,702	+		Echvi_2686	0.55	+0.2
3,192,776	-		Echvi_2686	0.65	-0.4
3,192,833	-		Echvi_2686	0.73	-0.1
3,192,895	+		Echvi_2686	0.82	-1.1
3,192,895	+		Echvi_2686	0.82	-1.1
3,192,896	-		Echvi_2686	0.82	-1.6
3,192,896	-		Echvi_2686	0.82	-1.3
3,192,896	-		Echvi_2686	0.82	-0.4
3,192,896	-		Echvi_2686	0.82	-0.3
3,192,896	-		Echvi_2686	0.82	-1.0
3,192,896	-		Echvi_2686	0.82	-0.5
3,192,998	+				-1.6
3,192,998	+				-1.0
3,193,007	+				+0.1
3,193,008	-				+0.9
3,193,081	-				+0.4
3,193,104	+				-2.0
3,193,104	+				+2.8
3,193,106	+				-0.8
3,193,106	+				+0.9
3,193,113	+				+0.6
3,193,126	-				+0.5
3,193,126	-				-0.8
3,193,130	+				-1.2
3,193,130	+				+1.2
3,193,131	-				+0.3
3,193,151	+				+0.6
3,193,159	-				-0.8
3,193,161	-				+0.3
3,193,192	+				-0.3
3,193,192	+				-0.0
3,193,193	-				-1.4
3,193,204	-				+0.2
3,193,208	+				-0.6
3,193,208	+				+0.8
3,193,229	+				-0.3
3,193,248	-		Echvi_2687	0.11	+0.6
3,193,248	-		Echvi_2687	0.11	-1.2
3,193,308	+		Echvi_2687	0.25	-0.6
3,193,309	-		Echvi_2687	0.26	-1.0
3,193,339	-		Echvi_2687	0.33	+0.4
3,193,379	+		Echvi_2687	0.42	-1.1
3,193,426	+		Echvi_2687	0.53	-1.7
3,193,471	+		Echvi_2687	0.63	-0.6
3,193,471	+		Echvi_2687	0.63	+0.8
3,193,544	+		Echvi_2687	0.80	-1.5
3,193,578	-		Echvi_2687	0.88	-0.7
3,193,596	-				-1.9
3,193,614	-				+0.5
3,193,634	+				-0.5
3,193,634	+				+0.1
3,193,634	+				-0.9
3,193,635	-				+0.3
3,193,635	-				-0.2
3,193,636	+				+1.5
3,193,636	+				-0.1
3,193,637	-				-0.2
3,193,637	-				-0.4
3,193,637	-				+1.2
3,193,692	+				-0.1
3,193,693	-				+0.8
3,193,756	+				+0.4
3,193,804	-		Echvi_2688	0.13	+0.2
3,193,804	-		Echvi_2688	0.13	-0.4
3,193,843	-		Echvi_2688	0.16	+1.2
3,193,898	+		Echvi_2688	0.21	-1.8
3,193,931	-		Echvi_2688	0.24	-1.8
3,193,948	-		Echvi_2688	0.25	-0.2
3,193,983	+		Echvi_2688	0.28	-0.7
3,193,983	+		Echvi_2688	0.28	-0.6
3,193,983	+		Echvi_2688	0.28	-0.7
3,193,984	-		Echvi_2688	0.28	+0.6
3,193,986	-		Echvi_2688	0.28	-1.1
3,193,991	+		Echvi_2688	0.28	-0.8
3,193,992	-		Echvi_2688	0.28	-1.1
3,194,047	-		Echvi_2688	0.33	+2.2
3,194,081	-		Echvi_2688	0.36	-1.1
3,194,088	-		Echvi_2688	0.36	-0.3
3,194,176	-		Echvi_2688	0.43	+1.2
3,194,185	-		Echvi_2688	0.44	+0.7
3,194,203	+		Echvi_2688	0.46	-0.1
3,194,204	-		Echvi_2688	0.46	-1.5
3,194,204	-		Echvi_2688	0.46	+1.5
3,194,208	-		Echvi_2688	0.46	-0.5
3,194,208	-		Echvi_2688	0.46	+0.7
3,194,208	-		Echvi_2688	0.46	+0.1
3,194,224	+		Echvi_2688	0.47	+0.4
3,194,241	-		Echvi_2688	0.49	+1.0
3,194,241	-		Echvi_2688	0.49	-0.9
3,194,241	-		Echvi_2688	0.49	+0.7
3,194,241	-		Echvi_2688	0.49	+0.4
3,194,241	-		Echvi_2688	0.49	-0.5
3,194,241	-		Echvi_2688	0.49	-0.6
3,194,241	-		Echvi_2688	0.49	+2.0
3,194,241	-		Echvi_2688	0.49	+0.9
3,194,298	+		Echvi_2688	0.53	-0.8
3,194,320	+		Echvi_2688	0.55	+0.7
3,194,321	-		Echvi_2688	0.55	+0.8
3,194,321	-		Echvi_2688	0.55	+0.6
3,194,321	-		Echvi_2688	0.55	-1.0
3,194,323	-		Echvi_2688	0.55	+1.0
3,194,339	+		Echvi_2688	0.56	+0.6
3,194,339	+		Echvi_2688	0.56	+0.1
3,194,340	-		Echvi_2688	0.57	+0.5
3,194,385	-		Echvi_2688	0.60	-2.3
3,194,396	-		Echvi_2688	0.61	+0.6
3,194,426	+		Echvi_2688	0.64	+1.2
3,194,427	-		Echvi_2688	0.64	-0.9
3,194,478	+		Echvi_2688	0.68	+0.2
3,194,478	+		Echvi_2688	0.68	+0.1
3,194,480	+		Echvi_2688	0.68	+1.3
3,194,554	+		Echvi_2688	0.74	+1.5
3,194,555	-		Echvi_2688	0.74	-0.3
3,194,616	+		Echvi_2688	0.79	+0.0
3,194,616	+		Echvi_2688	0.79	+1.0
3,194,617	-		Echvi_2688	0.79	+2.0
3,194,617	-		Echvi_2688	0.79	-1.3
3,194,617	-		Echvi_2688	0.79	+1.3
3,194,617	-		Echvi_2688	0.79	-0.8
3,194,618	+		Echvi_2688	0.79	+1.0
3,194,619	-		Echvi_2688	0.79	-0.4
3,194,641	-		Echvi_2688	0.81	-1.4
3,194,648	+		Echvi_2688	0.81	-0.8
3,194,764	+				+1.6
3,194,765	-				-1.0
3,194,778	-				-0.1
3,194,778	-				+0.2
3,194,786	+				-0.1
3,194,799	+				-0.7
3,194,864	-				-1.2
3,194,877	+				+3.8
3,194,929	+				+0.6
3,194,930	-				-0.2
3,194,986	-				+0.8
3,194,987	+				-0.1
3,195,054	+				-0.9
3,195,054	+				-1.8
3,195,055	-				+0.4
3,195,055	-				+0.6
3,195,057	+				+0.3
3,195,057	+				+0.6
3,195,057	+				-0.4
3,195,057	+				+0.3
3,195,058	-				+1.1
3,195,058	-				+0.3
3,195,058	-				+1.2
3,195,058	-				-0.2
3,195,058	-				-0.1
3,195,058	-				+0.1
3,195,110	-				-0.4
3,195,122	+				+1.7
3,195,126	+				-0.6
3,195,144	+				+0.0
3,195,144	+				-1.6
3,195,145	-				+1.3
3,195,145	-				-1.1
3,195,145	-				-0.9
3,195,146	+				+0.3
3,195,168	+				-0.1
3,195,222	-				+0.1
3,195,256	+				-0.2
3,195,257	-				+0.2
3,195,268	+				-0.8
3,195,271	+				-0.6
3,195,279	-		Echvi_2689	0.10	+0.1
3,195,332	+		Echvi_2689	0.14	-0.2
3,195,332	+		Echvi_2689	0.14	+0.9
3,195,394	-		Echvi_2689	0.19	-0.5
3,195,425	+		Echvi_2689	0.22	+0.6
3,195,425	+		Echvi_2689	0.22	-0.4
3,195,452	+		Echvi_2689	0.24	-0.2
3,195,453	-		Echvi_2689	0.24	-0.1
3,195,453	-		Echvi_2689	0.24	+0.3
3,195,480	+		Echvi_2689	0.26	+0.2
3,195,480	+		Echvi_2689	0.26	+1.7
3,195,486	+		Echvi_2689	0.27	+0.7
3,195,487	-		Echvi_2689	0.27	+0.4
3,195,487	-		Echvi_2689	0.27	-0.9
3,195,491	+		Echvi_2689	0.27	+0.9
3,195,491	+		Echvi_2689	0.27	+0.2
3,195,492	-		Echvi_2689	0.27	+0.7
3,195,492	-		Echvi_2689	0.27	-0.1
3,195,509	+		Echvi_2689	0.28	-0.5
3,195,520	-		Echvi_2689	0.29	+0.3
3,195,520	-		Echvi_2689	0.29	+0.4
3,195,520	-		Echvi_2689	0.29	-0.3
3,195,552	-		Echvi_2689	0.32	+0.1
3,195,561	-		Echvi_2689	0.32	-0.3
3,195,623	-		Echvi_2689	0.37	+0.9
3,195,647	+		Echvi_2689	0.39	+0.1
3,195,650	-		Echvi_2689	0.39	-0.5
3,195,744	-		Echvi_2689	0.47	-1.1
3,195,758	+		Echvi_2689	0.48	+0.7
3,195,759	-		Echvi_2689	0.48	-1.9
3,195,759	-		Echvi_2689	0.48	-0.8
3,195,782	-		Echvi_2689	0.50	-3.6
3,195,805	-		Echvi_2689	0.51	-2.1
3,195,805	-		Echvi_2689	0.51	+0.7