Experiment: m.b. Lomefloxacin 0.025 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_2613 and Echvi_2614 overlap by 4 nucleotides Echvi_2614 and Echvi_2615 overlap by 1 nucleotides
Echvi_2613: Echvi_2613 - Periplasmic component of the Tol biopolymer transport system, at 3,096,428 to 3,097,711
_2613
Echvi_2614: Echvi_2614 - SusD family., at 3,097,708 to 3,099,327
_2614
Echvi_2615: Echvi_2615 - TonB-linked outer membrane protein, SusC/RagA family, at 3,099,327 to 3,102,392
_2615
Position (kb)
3097
3098
3099
3100 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 3096.744 kb on + strand, within Echvi_2613 at 3096.745 kb on - strand, within Echvi_2613 at 3096.945 kb on + strand, within Echvi_2613 at 3096.945 kb on + strand, within Echvi_2613 at 3096.946 kb on - strand, within Echvi_2613 at 3096.946 kb on - strand, within Echvi_2613 at 3096.946 kb on - strand, within Echvi_2613 at 3096.946 kb on - strand, within Echvi_2613 at 3097.047 kb on + strand, within Echvi_2613 at 3097.130 kb on + strand, within Echvi_2613 at 3097.151 kb on + strand, within Echvi_2613 at 3097.152 kb on - strand, within Echvi_2613 at 3097.164 kb on + strand, within Echvi_2613 at 3097.184 kb on - strand, within Echvi_2613 at 3097.255 kb on - strand, within Echvi_2613 at 3097.288 kb on + strand, within Echvi_2613 at 3097.347 kb on + strand, within Echvi_2613 at 3097.438 kb on + strand, within Echvi_2613 at 3097.438 kb on + strand, within Echvi_2613 at 3097.438 kb on + strand, within Echvi_2613 at 3097.903 kb on + strand, within Echvi_2614 at 3097.912 kb on - strand, within Echvi_2614 at 3098.071 kb on - strand, within Echvi_2614 at 3098.136 kb on + strand, within Echvi_2614 at 3098.159 kb on - strand, within Echvi_2614 at 3098.191 kb on + strand, within Echvi_2614 at 3098.191 kb on + strand, within Echvi_2614 at 3098.191 kb on + strand, within Echvi_2614 at 3098.192 kb on - strand, within Echvi_2614 at 3098.442 kb on - strand, within Echvi_2614 at 3098.445 kb on + strand, within Echvi_2614 at 3098.458 kb on - strand, within Echvi_2614 at 3098.513 kb on - strand, within Echvi_2614 at 3098.549 kb on + strand, within Echvi_2614 at 3098.549 kb on + strand, within Echvi_2614 at 3098.549 kb on + strand, within Echvi_2614 at 3098.550 kb on - strand, within Echvi_2614 at 3098.622 kb on + strand, within Echvi_2614 at 3098.622 kb on + strand, within Echvi_2614 at 3098.622 kb on + strand, within Echvi_2614 at 3098.622 kb on + strand, within Echvi_2614 at 3098.623 kb on - strand, within Echvi_2614 at 3098.651 kb on + strand, within Echvi_2614 at 3098.655 kb on - strand, within Echvi_2614 at 3098.819 kb on + strand, within Echvi_2614 at 3098.825 kb on + strand, within Echvi_2614 at 3098.960 kb on + strand, within Echvi_2614 at 3098.960 kb on + strand, within Echvi_2614 at 3098.960 kb on + strand, within Echvi_2614 at 3099.077 kb on + strand, within Echvi_2614 at 3099.159 kb on - strand, within Echvi_2614 at 3099.180 kb on + strand at 3099.185 kb on + strand at 3099.186 kb on - strand at 3099.186 kb on - strand at 3099.264 kb on + strand at 3099.264 kb on + strand at 3099.264 kb on + strand at 3099.264 kb on + strand at 3099.264 kb on + strand at 3099.264 kb on + strand at 3099.265 kb on - strand at 3099.265 kb on - strand at 3099.353 kb on + strand at 3099.353 kb on + strand at 3099.373 kb on + strand at 3099.382 kb on + strand at 3099.386 kb on - strand at 3099.430 kb on - strand at 3099.468 kb on + strand at 3099.469 kb on - strand at 3099.487 kb on + strand at 3099.487 kb on + strand at 3099.487 kb on + strand at 3099.487 kb on + strand at 3099.548 kb on + strand at 3099.565 kb on + strand at 3099.630 kb on - strand at 3099.630 kb on - strand at 3099.672 kb on - strand, within Echvi_2615 at 3099.749 kb on + strand, within Echvi_2615 at 3099.813 kb on + strand, within Echvi_2615 at 3099.814 kb on - strand, within Echvi_2615 at 3099.892 kb on + strand, within Echvi_2615 at 3099.893 kb on - strand, within Echvi_2615 at 3099.903 kb on + strand, within Echvi_2615 at 3100.257 kb on + strand, within Echvi_2615 at 3100.257 kb on + strand, within Echvi_2615 at 3100.303 kb on + strand, within Echvi_2615 at 3100.303 kb on + strand, within Echvi_2615 at 3100.304 kb on - strand, within Echvi_2615 at 3100.317 kb on + strand, within Echvi_2615 at 3100.318 kb on - strand, within Echvi_2615
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Lomefloxacin 0.025 mM remove 3,096,744 + Echvi_2613 0.25 -0.9 3,096,745 - Echvi_2613 0.25 +0.7 3,096,945 + Echvi_2613 0.40 -2.1 3,096,945 + Echvi_2613 0.40 -0.1 3,096,946 - Echvi_2613 0.40 -0.4 3,096,946 - Echvi_2613 0.40 -0.4 3,096,946 - Echvi_2613 0.40 -0.5 3,096,946 - Echvi_2613 0.40 +0.0 3,097,047 + Echvi_2613 0.48 +1.1 3,097,130 + Echvi_2613 0.55 -0.6 3,097,151 + Echvi_2613 0.56 -0.7 3,097,152 - Echvi_2613 0.56 -0.8 3,097,164 + Echvi_2613 0.57 +3.2 3,097,184 - Echvi_2613 0.59 -0.5 3,097,255 - Echvi_2613 0.64 -0.6 3,097,288 + Echvi_2613 0.67 +2.0 3,097,347 + Echvi_2613 0.72 -0.3 3,097,438 + Echvi_2613 0.79 -0.6 3,097,438 + Echvi_2613 0.79 -1.1 3,097,438 + Echvi_2613 0.79 -0.9 3,097,903 + Echvi_2614 0.12 +1.3 3,097,912 - Echvi_2614 0.13 -0.4 3,098,071 - Echvi_2614 0.22 +1.4 3,098,136 + Echvi_2614 0.26 +1.7 3,098,159 - Echvi_2614 0.28 +2.2 3,098,191 + Echvi_2614 0.30 +1.1 3,098,191 + Echvi_2614 0.30 +0.6 3,098,191 + Echvi_2614 0.30 -0.0 3,098,192 - Echvi_2614 0.30 +1.2 3,098,442 - Echvi_2614 0.45 +0.2 3,098,445 + Echvi_2614 0.45 +1.4 3,098,458 - Echvi_2614 0.46 +1.0 3,098,513 - Echvi_2614 0.50 -2.2 3,098,549 + Echvi_2614 0.52 +0.2 3,098,549 + Echvi_2614 0.52 -2.5 3,098,549 + Echvi_2614 0.52 -1.0 3,098,550 - Echvi_2614 0.52 -0.6 3,098,622 + Echvi_2614 0.56 +0.5 3,098,622 + Echvi_2614 0.56 +0.5 3,098,622 + Echvi_2614 0.56 +0.3 3,098,622 + Echvi_2614 0.56 +0.9 3,098,623 - Echvi_2614 0.56 +0.8 3,098,651 + Echvi_2614 0.58 +0.4 3,098,655 - Echvi_2614 0.58 +0.7 3,098,819 + Echvi_2614 0.69 +0.3 3,098,825 + Echvi_2614 0.69 +0.2 3,098,960 + Echvi_2614 0.77 -0.2 3,098,960 + Echvi_2614 0.77 +1.9 3,098,960 + Echvi_2614 0.77 +0.9 3,099,077 + Echvi_2614 0.85 +0.4 3,099,159 - Echvi_2614 0.90 +0.7 3,099,180 + -0.3 3,099,185 + -0.7 3,099,186 - +0.2 3,099,186 - +0.0 3,099,264 + -0.4 3,099,264 + -1.1 3,099,264 + +1.2 3,099,264 + -0.6 3,099,264 + +0.0 3,099,264 + -1.6 3,099,265 - +1.1 3,099,265 - +0.5 3,099,353 + +0.9 3,099,353 + -0.4 3,099,373 + -0.8 3,099,382 + +0.4 3,099,386 - -0.8 3,099,430 - +0.2 3,099,468 + +0.8 3,099,469 - +1.3 3,099,487 + +1.0 3,099,487 + -0.6 3,099,487 + -0.0 3,099,487 + -0.2 3,099,548 + +0.0 3,099,565 + -0.1 3,099,630 - +0.6 3,099,630 - -2.5 3,099,672 - Echvi_2615 0.11 +1.8 3,099,749 + Echvi_2615 0.14 -0.4 3,099,813 + Echvi_2615 0.16 +0.2 3,099,814 - Echvi_2615 0.16 +1.8 3,099,892 + Echvi_2615 0.18 +2.0 3,099,893 - Echvi_2615 0.18 -1.2 3,099,903 + Echvi_2615 0.19 -0.3 3,100,257 + Echvi_2615 0.30 -1.6 3,100,257 + Echvi_2615 0.30 +0.0 3,100,303 + Echvi_2615 0.32 +0.4 3,100,303 + Echvi_2615 0.32 -0.6 3,100,304 - Echvi_2615 0.32 +3.2 3,100,317 + Echvi_2615 0.32 -0.3 3,100,318 - Echvi_2615 0.32 +0.1
Or see this region's nucleotide sequence