Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_1933

Experiment: m.b. Lomefloxacin 0.025 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Lomefloxacin 0.025 mM
2,275,758	-		Echvi_1932	0.46	+0.9
2,275,780	-		Echvi_1932	0.48	-0.2
2,275,781	+		Echvi_1932	0.48	-1.1
2,275,809	+		Echvi_1932	0.49	-2.3
2,275,809	+		Echvi_1932	0.49	-1.7
2,275,809	+		Echvi_1932	0.49	-0.2
2,275,810	-		Echvi_1932	0.49	-0.3
2,275,812	+		Echvi_1932	0.49	-0.4
2,275,813	-		Echvi_1932	0.50	-0.5
2,275,821	-		Echvi_1932	0.50	-1.4
2,275,821	-		Echvi_1932	0.50	-0.4
2,275,841	+		Echvi_1932	0.51	-1.8
2,275,853	-		Echvi_1932	0.52	-1.4
2,275,972	+		Echvi_1932	0.58	-0.4
2,276,040	-		Echvi_1932	0.62	+1.5
2,276,071	-		Echvi_1932	0.64	+0.2
2,276,079	+		Echvi_1932	0.64	-1.4
2,276,135	-		Echvi_1932	0.67	+0.8
2,276,144	-		Echvi_1932	0.68	+1.9
2,276,144	-		Echvi_1932	0.68	-0.1
2,276,144	-		Echvi_1932	0.68	-0.2
2,276,146	-		Echvi_1932	0.68	-1.0
2,276,198	+		Echvi_1932	0.71	-0.3
2,276,198	+		Echvi_1932	0.71	-1.3
2,276,198	+		Echvi_1932	0.71	-0.4
2,276,199	-		Echvi_1932	0.71	-0.8
2,276,242	+		Echvi_1932	0.73	-1.1
2,276,242	+		Echvi_1932	0.73	-0.0
2,276,242	+		Echvi_1932	0.73	-0.3
2,276,244	+		Echvi_1932	0.73	-2.3
2,276,244	+		Echvi_1932	0.73	+0.1
2,276,245	-		Echvi_1932	0.73	+0.3
2,276,280	+		Echvi_1932	0.75	-1.3
2,276,284	-		Echvi_1932	0.75	+0.3
2,276,313	+		Echvi_1932	0.77	+0.9
2,276,313	+		Echvi_1932	0.77	-0.9
2,276,313	+		Echvi_1932	0.77	-2.0
2,276,313	+		Echvi_1932	0.77	-0.4
2,276,313	+		Echvi_1932	0.77	+0.2
2,276,314	-		Echvi_1932	0.77	+0.7
2,276,368	+		Echvi_1932	0.80	-0.4
2,276,368	+		Echvi_1932	0.80	-0.7
2,276,386	-		Echvi_1932	0.81	-2.2
2,276,386	-		Echvi_1932	0.81	-0.1
2,276,388	+		Echvi_1932	0.81	-0.1
2,276,427	+		Echvi_1932	0.83	-1.3
2,276,428	-		Echvi_1932	0.83	-0.5
2,276,431	+		Echvi_1932	0.83	+0.3
2,276,460	+		Echvi_1932	0.85	-0.4
2,276,461	-		Echvi_1932	0.85	-1.2
2,276,461	-		Echvi_1932	0.85	+0.1
2,276,527	-		Echvi_1932	0.89	-0.3
2,276,527	-		Echvi_1932	0.89	+0.0
2,276,532	+		Echvi_1932	0.89	-1.1
2,276,536	-		Echvi_1932	0.89	-1.6
2,276,536	-		Echvi_1932	0.89	-0.9
2,276,561	+				-0.2
2,276,561	+				+0.3
2,276,562	-				-0.4
2,276,562	-				-0.7
2,276,562	-				-0.9
2,276,563	+				+0.2
2,276,564	-				-1.1
2,276,564	-				-0.8
2,276,564	-				-0.7
2,276,564	-				+0.3
2,276,677	+				-0.5
2,276,697	+				-0.7
2,276,698	-				-2.2
2,276,698	-				+0.1
2,276,698	-				+0.5
2,276,731	-				+0.9
2,276,735	+				-0.6
2,276,736	-				-0.8
2,276,736	-				-0.8
2,276,736	-				+0.3
2,276,778	+				-0.8
2,276,784	+				+0.1
2,276,872	+		Echvi_1933	0.13	-0.6
2,276,918	-		Echvi_1933	0.18	+1.2
2,276,932	-		Echvi_1933	0.20	-1.4
2,276,949	-		Echvi_1933	0.21	-1.4
2,276,949	-		Echvi_1933	0.21	-0.5
2,276,951	-		Echvi_1933	0.22	-1.8
2,276,971	+		Echvi_1933	0.24	+0.3
2,276,971	+		Echvi_1933	0.24	+0.4
2,277,065	-		Echvi_1933	0.34	+1.5
2,277,178	+		Echvi_1933	0.47	-1.1
2,277,179	-		Echvi_1933	0.47	-1.3
2,277,185	+		Echvi_1933	0.48	+0.7
2,277,185	+		Echvi_1933	0.48	-1.0
2,277,188	+		Echvi_1933	0.48	-0.4
2,277,218	-		Echvi_1933	0.52	-0.3
2,277,277	+		Echvi_1933	0.58	-1.3
2,277,350	+		Echvi_1933	0.66	-0.6
2,277,378	+		Echvi_1933	0.69	+0.8
2,277,379	-		Echvi_1933	0.70	-0.8
2,277,390	-		Echvi_1933	0.71	-0.1
2,277,434	+		Echvi_1933	0.76	+0.9
2,277,444	-		Echvi_1933	0.77	-0.6
2,277,447	+		Echvi_1933	0.77	-2.7
2,277,448	-		Echvi_1933	0.77	-0.9
2,277,453	+		Echvi_1933	0.78	-0.1
2,277,539	+		Echvi_1933	0.87	-0.0
2,277,551	+		Echvi_1933	0.89	-0.1
2,277,555	-		Echvi_1933	0.89	-2.8
2,277,555	-		Echvi_1933	0.89	-2.4
2,277,575	+				-1.0
2,277,637	+				-0.5
2,277,637	+				-0.3
2,277,721	+		Echvi_1934	0.26	-1.3
2,277,721	+		Echvi_1934	0.26	+0.3
2,277,724	+		Echvi_1934	0.28	+2.1
2,277,725	-		Echvi_1934	0.28	-0.7
2,277,736	+		Echvi_1934	0.32	-0.4
2,277,742	+		Echvi_1934	0.34	+0.4
2,277,742	+		Echvi_1934	0.34	-0.7
2,277,743	-		Echvi_1934	0.35	-1.2
2,277,744	+		Echvi_1934	0.35	+0.4
2,277,781	-		Echvi_1934	0.50	-0.2
2,277,826	+		Echvi_1934	0.67	-0.2
2,277,826	+		Echvi_1934	0.67	+0.9
2,277,826	+		Echvi_1934	0.67	-0.1
2,277,827	-		Echvi_1934	0.67	-0.4
2,277,827	-		Echvi_1934	0.67	-0.6
2,277,828	+		Echvi_1934	0.68	-0.3
2,277,911	-				+1.2
2,277,950	-				+0.6
2,277,950	-				+0.2
2,277,983	+				+0.7
2,277,983	+				-0.4
2,277,983	+				-0.2
2,278,012	+				-0.1
2,278,024	+				-1.5
2,278,039	+				-1.4
2,278,040	-				-0.6
2,278,067	-				-0.8
2,278,073	+				-1.0
2,278,073	+				+0.2
2,278,074	-				-3.3
2,278,074	-				-0.4
2,278,166	-				-0.7
2,278,166	-				-1.6
2,278,166	-				-1.5
2,278,166	-				+0.3
2,278,172	+				-0.2
2,278,172	+				+0.1
2,278,174	+				+0.3
2,278,174	+				-1.2
2,278,175	-				+1.2
2,278,200	+				-0.7
2,278,205	-				-2.1
2,278,206	+				+0.5
2,278,237	+				+0.3
2,278,264	-				-0.2
2,278,277	+		Echvi_1935	0.11	+2.3
2,278,289	-		Echvi_1935	0.12	-0.7
2,278,295	+		Echvi_1935	0.13	-2.0
2,278,298	+		Echvi_1935	0.13	-0.4
2,278,299	-		Echvi_1935	0.13	-0.2
2,278,385	+		Echvi_1935	0.21	+0.5
2,278,388	-		Echvi_1935	0.22	+0.2
2,278,398	-		Echvi_1935	0.23	-0.8
2,278,427	+		Echvi_1935	0.25	+0.1
2,278,466	+		Echvi_1935	0.29	+1.9
2,278,467	-		Echvi_1935	0.29	-0.7
2,278,472	+		Echvi_1935	0.30	-1.9
2,278,472	+		Echvi_1935	0.30	+1.1
2,278,472	+		Echvi_1935	0.30	-1.1
2,278,472	+		Echvi_1935	0.30	-0.1
2,278,522	-		Echvi_1935	0.35	-0.3
2,278,559	+		Echvi_1935	0.38	-0.5
2,278,562	+		Echvi_1935	0.39	+1.2
2,278,579	-		Echvi_1935	0.40	+1.1
2,278,593	-		Echvi_1935	0.42	+1.3
2,278,612	+		Echvi_1935	0.43	+0.1
2,278,612	+		Echvi_1935	0.43	+0.7
2,278,616	+		Echvi_1935	0.44	+0.6
2,278,616	+		Echvi_1935	0.44	+2.0
2,278,632	+		Echvi_1935	0.45	-0.9
2,278,632	+		Echvi_1935	0.45	-1.0
2,278,634	+		Echvi_1935	0.46	-1.3