Experiment: m.b. Lomefloxacin 0.025 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_1805 and Echvi_1806 are separated by 63 nucleotides Echvi_1806 and Echvi_1807 are separated by 356 nucleotides
Echvi_1805: Echvi_1805 - DNA segregation ATPase FtsK/SpoIIIE and related proteins, at 2,121,062 to 2,123,539
_1805
Echvi_1806: Echvi_1806 - dihydroorotate dehydrogenase, subfamily 2, at 2,123,603 to 2,124,649
_1806
Echvi_1807: Echvi_1807 - hypothetical protein, at 2,125,006 to 2,127,384
_1807
Position (kb)
2123
2124
2125 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 2123.564 kb on - strand at 2123.567 kb on - strand at 2123.571 kb on - strand at 2123.596 kb on + strand at 2123.616 kb on + strand at 2124.706 kb on + strand at 2124.756 kb on - strand at 2124.774 kb on + strand at 2124.774 kb on + strand at 2124.779 kb on - strand at 2124.830 kb on - strand at 2124.832 kb on + strand at 2124.833 kb on - strand at 2124.849 kb on - strand at 2124.866 kb on + strand at 2124.882 kb on - strand at 2124.884 kb on + strand at 2124.884 kb on + strand at 2124.885 kb on - strand at 2124.931 kb on - strand at 2124.931 kb on - strand at 2124.933 kb on + strand at 2124.933 kb on + strand at 2124.942 kb on + strand at 2124.942 kb on + strand at 2124.943 kb on - strand at 2124.944 kb on + strand at 2124.944 kb on + strand at 2124.945 kb on - strand at 2124.948 kb on + strand at 2124.948 kb on + strand at 2124.949 kb on - strand at 2125.002 kb on - strand at 2125.002 kb on - strand at 2125.215 kb on + strand at 2125.215 kb on + strand at 2125.216 kb on - strand at 2125.216 kb on - strand at 2125.257 kb on + strand, within Echvi_1807 at 2125.258 kb on - strand, within Echvi_1807 at 2125.258 kb on - strand, within Echvi_1807 at 2125.354 kb on + strand, within Echvi_1807 at 2125.356 kb on + strand, within Echvi_1807 at 2125.357 kb on - strand, within Echvi_1807 at 2125.357 kb on - strand, within Echvi_1807 at 2125.445 kb on + strand, within Echvi_1807 at 2125.446 kb on - strand, within Echvi_1807 at 2125.446 kb on - strand, within Echvi_1807 at 2125.466 kb on + strand, within Echvi_1807 at 2125.498 kb on + strand, within Echvi_1807 at 2125.498 kb on + strand, within Echvi_1807 at 2125.499 kb on - strand, within Echvi_1807 at 2125.558 kb on - strand, within Echvi_1807 at 2125.558 kb on - strand, within Echvi_1807 at 2125.631 kb on + strand, within Echvi_1807 at 2125.632 kb on - strand, within Echvi_1807 at 2125.632 kb on - strand, within Echvi_1807
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Lomefloxacin 0.025 mM remove 2,123,564 - -0.0 2,123,567 - -0.6 2,123,571 - +0.8 2,123,596 + -0.8 2,123,616 + -1.4 2,124,706 + -0.7 2,124,756 - +0.5 2,124,774 + +0.5 2,124,774 + -0.0 2,124,779 - +1.2 2,124,830 - -0.2 2,124,832 + +0.8 2,124,833 - +0.1 2,124,849 - -0.8 2,124,866 + -0.8 2,124,882 - +1.0 2,124,884 + +0.7 2,124,884 + -1.1 2,124,885 - -0.2 2,124,931 - -0.6 2,124,931 - +0.1 2,124,933 + -0.5 2,124,933 + -0.3 2,124,942 + -0.2 2,124,942 + -0.4 2,124,943 - -1.8 2,124,944 + -1.6 2,124,944 + +0.2 2,124,945 - -1.2 2,124,948 + -0.3 2,124,948 + -2.8 2,124,949 - -0.5 2,125,002 - -2.6 2,125,002 - -0.5 2,125,215 + +0.1 2,125,215 + -0.3 2,125,216 - -0.9 2,125,216 - +0.6 2,125,257 + Echvi_1807 0.11 -2.0 2,125,258 - Echvi_1807 0.11 -1.3 2,125,258 - Echvi_1807 0.11 -0.5 2,125,354 + Echvi_1807 0.15 +0.3 2,125,356 + Echvi_1807 0.15 -0.2 2,125,357 - Echvi_1807 0.15 -0.5 2,125,357 - Echvi_1807 0.15 -1.1 2,125,445 + Echvi_1807 0.18 -0.4 2,125,446 - Echvi_1807 0.18 +0.5 2,125,446 - Echvi_1807 0.18 +1.8 2,125,466 + Echvi_1807 0.19 -0.5 2,125,498 + Echvi_1807 0.21 -0.0 2,125,498 + Echvi_1807 0.21 +1.8 2,125,499 - Echvi_1807 0.21 -1.4 2,125,558 - Echvi_1807 0.23 -0.2 2,125,558 - Echvi_1807 0.23 +0.3 2,125,631 + Echvi_1807 0.26 -1.0 2,125,632 - Echvi_1807 0.26 -1.5 2,125,632 - Echvi_1807 0.26 +0.1
Or see this region's nucleotide sequence