Strain Fitness in Magnetospirillum magneticum AMB-1 around AMB_RS16655

Experiment: 150_an_nonmag_2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	150_an_nonmag_2
3,576,086	+				-1.0
3,576,110	-				-1.0
3,576,122	-				+0.2
3,576,124	+				-2.0
3,576,204	+				+0.0
3,576,251	+				-0.1
3,576,324	-				+0.2
3,576,344	-				-2.9
3,576,344	-				-0.2
3,576,457	+				+0.4
3,576,614	+				-0.4
3,576,681	+				+0.0
3,576,714	+				+0.0
3,576,774	+				-2.8
3,576,802	+				-0.9
3,576,802	+				+1.3
3,576,803	-				-0.3
3,576,803	-				-0.4
3,576,803	-				+0.1
3,576,803	-				-1.2
3,576,899	+				-1.0
3,576,899	+				+2.8
3,576,899	+				-2.5
3,576,900	-				+0.0
3,576,900	-				+0.3
3,576,900	-				+0.1
3,576,900	-				-1.4
3,576,982	-				-1.0
3,577,056	+				-2.7
3,577,082	+		AMB_RS16655	0.10	+1.6
3,577,082	+		AMB_RS16655	0.10	-0.6
3,577,082	+		AMB_RS16655	0.10	-0.2
3,577,082	+		AMB_RS16655	0.10	+1.6
3,577,162	-		AMB_RS16655	0.12	-2.6
3,577,162	-		AMB_RS16655	0.12	+1.0
3,577,162	-		AMB_RS16655	0.12	+1.2
3,577,163	+		AMB_RS16655	0.12	-0.4
3,577,164	-		AMB_RS16655	0.12	-0.1
3,577,227	-		AMB_RS16655	0.14	-0.8
3,577,317	+		AMB_RS16655	0.16	-0.7
3,577,403	+		AMB_RS16655	0.19	-0.6
3,577,403	+		AMB_RS16655	0.19	-2.2
3,577,403	+		AMB_RS16655	0.19	-0.7
3,577,403	+		AMB_RS16655	0.19	-2.1
3,577,403	+		AMB_RS16655	0.19	-0.0
3,577,403	+		AMB_RS16655	0.19	-3.0
3,577,403	+		AMB_RS16655	0.19	-0.7
3,577,403	+		AMB_RS16655	0.19	-0.1
3,577,404	-		AMB_RS16655	0.19	-1.4
3,577,404	-		AMB_RS16655	0.19	-0.7
3,577,404	-		AMB_RS16655	0.19	-0.1
3,577,404	-		AMB_RS16655	0.19	+0.3
3,577,404	-		AMB_RS16655	0.19	+0.6
3,577,404	-		AMB_RS16655	0.19	-1.7
3,577,404	-		AMB_RS16655	0.19	+0.0
3,577,404	-		AMB_RS16655	0.19	-1.1
3,577,559	+		AMB_RS16655	0.23	-0.2
3,577,559	+		AMB_RS16655	0.23	-0.7
3,577,559	+		AMB_RS16655	0.23	-1.0
3,577,560	-		AMB_RS16655	0.23	+0.0
3,577,560	-		AMB_RS16655	0.23	+0.6
3,577,632	+		AMB_RS16655	0.25	-1.3
3,577,632	+		AMB_RS16655	0.25	-0.6
3,577,794	+		AMB_RS16655	0.29	-1.3
3,577,816	-		AMB_RS16655	0.29	-1.6
3,577,816	-		AMB_RS16655	0.29	-1.2
3,577,873	+		AMB_RS16655	0.31	-0.7
3,577,873	+		AMB_RS16655	0.31	-0.7
3,577,873	+		AMB_RS16655	0.31	-0.7
3,577,874	-		AMB_RS16655	0.31	-1.4
3,577,874	-		AMB_RS16655	0.31	-1.4
3,577,874	-		AMB_RS16655	0.31	+0.1
3,577,874	-		AMB_RS16655	0.31	-1.4
3,577,874	-		AMB_RS16655	0.31	+1.0
3,577,983	+		AMB_RS16655	0.34	-1.6
3,577,983	+		AMB_RS16655	0.34	-0.4
3,578,003	+		AMB_RS16655	0.34	-0.5
3,578,003	+		AMB_RS16655	0.34	+0.2
3,578,013	+		AMB_RS16655	0.35	-1.0
3,578,119	-		AMB_RS16655	0.37	-0.0
3,578,248	-		AMB_RS16655	0.41	-0.1
3,578,316	+		AMB_RS16655	0.43	+0.4
3,578,316	+		AMB_RS16655	0.43	-1.7
3,578,316	+		AMB_RS16655	0.43	-0.0
3,578,316	+		AMB_RS16655	0.43	+1.2
3,578,317	-		AMB_RS16655	0.43	+0.6
3,578,317	-		AMB_RS16655	0.43	+0.2
3,578,317	-		AMB_RS16655	0.43	-3.5
3,578,317	-		AMB_RS16655	0.43	+0.6
3,578,317	-		AMB_RS16655	0.43	+1.0
3,578,356	+		AMB_RS16655	0.44	-0.3
3,578,356	+		AMB_RS16655	0.44	-1.8
3,578,356	+		AMB_RS16655	0.44	+0.6
3,578,356	+		AMB_RS16655	0.44	-2.6
3,578,356	+		AMB_RS16655	0.44	-0.7
3,578,357	-		AMB_RS16655	0.44	+0.6
3,578,357	-		AMB_RS16655	0.44	-1.0
3,578,357	-		AMB_RS16655	0.44	-1.8
3,578,357	-		AMB_RS16655	0.44	-0.0
3,578,357	-		AMB_RS16655	0.44	-0.2
3,578,357	-		AMB_RS16655	0.44	-0.2
3,578,357	-		AMB_RS16655	0.44	-0.6
3,578,383	+		AMB_RS16655	0.44	-0.7
3,578,383	+		AMB_RS16655	0.44	+1.1
3,578,714	+		AMB_RS16655	0.53	-2.6
3,578,714	+		AMB_RS16655	0.53	-1.2
3,578,714	+		AMB_RS16655	0.53	+0.0
3,578,714	+		AMB_RS16655	0.53	-0.7
3,578,714	+		AMB_RS16655	0.53	+0.0
3,578,714	+		AMB_RS16655	0.53	+0.7
3,578,714	+		AMB_RS16655	0.53	-1.0
3,578,714	+		AMB_RS16655	0.53	+0.1
3,578,715	-		AMB_RS16655	0.53	-0.0
3,578,715	-		AMB_RS16655	0.53	+0.1
3,578,715	-		AMB_RS16655	0.53	-0.1
3,578,715	-		AMB_RS16655	0.53	-1.7
3,578,715	-		AMB_RS16655	0.53	-3.1
3,578,715	-		AMB_RS16655	0.53	+0.1
3,578,717	+		AMB_RS16655	0.53	-0.3
3,578,717	+		AMB_RS16655	0.53	+0.8
3,578,717	+		AMB_RS16655	0.53	-1.0
3,578,717	+		AMB_RS16655	0.53	-1.6
3,578,718	-		AMB_RS16655	0.53	-0.7
3,578,718	-		AMB_RS16655	0.53	+1.2
3,578,748	+		AMB_RS16655	0.54	-3.7
3,578,748	+		AMB_RS16655	0.54	-4.1
3,578,748	+		AMB_RS16655	0.54	-1.5
3,578,749	-		AMB_RS16655	0.54	-2.5
3,578,750	+		AMB_RS16655	0.54	+0.6
3,578,750	+		AMB_RS16655	0.54	+0.1
3,578,750	+		AMB_RS16655	0.54	-0.2
3,578,750	+		AMB_RS16655	0.54	-1.7
3,578,750	+		AMB_RS16655	0.54	-0.2
3,578,750	+		AMB_RS16655	0.54	-1.3
3,578,750	+		AMB_RS16655	0.54	-0.4
3,578,750	+		AMB_RS16655	0.54	-0.3
3,578,750	+		AMB_RS16655	0.54	-0.4
3,578,751	-		AMB_RS16655	0.54	-0.1
3,578,822	-		AMB_RS16655	0.56	+1.2
3,578,843	+		AMB_RS16655	0.56	-0.3
3,578,843	+		AMB_RS16655	0.56	-0.6
3,578,844	-		AMB_RS16655	0.56	-1.9
3,578,844	-		AMB_RS16655	0.56	+1.6
3,578,844	-		AMB_RS16655	0.56	-0.6
3,578,847	+		AMB_RS16655	0.56	+0.4
3,578,847	+		AMB_RS16655	0.56	-1.0
3,578,848	-		AMB_RS16655	0.56	-3.5
3,578,848	-		AMB_RS16655	0.56	+0.5
3,578,848	-		AMB_RS16655	0.56	+0.2
3,578,849	+		AMB_RS16655	0.56	-2.9
3,578,849	+		AMB_RS16655	0.56	-1.6
3,578,850	-		AMB_RS16655	0.57	+1.6
3,578,850	-		AMB_RS16655	0.57	-0.4
3,579,029	+		AMB_RS16655	0.61	-0.7
3,579,029	+		AMB_RS16655	0.61	-1.2
3,579,029	+		AMB_RS16655	0.61	+0.3
3,579,030	-		AMB_RS16655	0.61	+0.6
3,579,030	-		AMB_RS16655	0.61	-0.3
3,579,030	-		AMB_RS16655	0.61	-0.4
3,579,044	+		AMB_RS16655	0.62	+0.3
3,579,070	+		AMB_RS16655	0.62	+0.6
3,579,070	+		AMB_RS16655	0.62	+0.6
3,579,071	-		AMB_RS16655	0.62	-0.4
3,579,257	-		AMB_RS16655	0.67	-1.0
3,579,277	+		AMB_RS16655	0.68	-0.4
3,579,278	-		AMB_RS16655	0.68	-1.3
3,579,278	-		AMB_RS16655	0.68	-0.4
3,579,330	+		AMB_RS16655	0.69	-3.7
3,579,331	-		AMB_RS16655	0.69	+0.4
3,579,331	-		AMB_RS16655	0.69	-0.6
3,579,331	-		AMB_RS16655	0.69	-0.7
3,579,331	-		AMB_RS16655	0.69	+0.2
3,579,332	+		AMB_RS16655	0.69	-3.0
3,579,332	+		AMB_RS16655	0.69	+0.5
3,579,333	-		AMB_RS16655	0.69	-0.8
3,579,333	-		AMB_RS16655	0.69	-0.6
3,579,356	+		AMB_RS16655	0.70	-0.7
3,579,517	-		AMB_RS16655	0.74	-0.7
3,579,912	+		AMB_RS16655	0.84	-0.8
3,579,913	-		AMB_RS16655	0.84	+1.4
3,579,913	-		AMB_RS16655	0.84	-2.6
3,580,138	-				-0.3
3,580,211	+				-0.4
3,580,211	+				-0.9
3,580,211	+				-0.3
3,580,211	+				+0.0
3,580,212	-				+1.6
3,580,212	-				+0.6
3,580,212	-				-0.4
3,580,212	-				-0.6
3,580,212	-				-0.5
3,580,212	-				+0.6
3,580,249	+				+0.9
3,580,250	-				-0.4
3,580,250	-				-4.7
3,580,250	-				-0.6
3,580,519	+				+0.3
3,580,519	+				-1.6
3,580,519	+				-1.4
3,580,519	+				+0.6
3,580,519	+				-1.4
3,580,519	+				-3.0
3,580,519	+				-0.4
3,580,519	+				+0.4
3,580,519	+				-0.6
3,580,519	+				+1.6
3,580,520	-				-2.0
3,580,520	-				-0.9
3,580,520	-				-0.2
3,580,520	-				-0.4
3,580,607	-				+0.0
3,580,607	-				+1.6
3,580,607	-				+1.3
3,580,839	+				+0.0
3,580,840	-				+0.6
3,580,840	-				+0.4
3,581,028	-				-1.0
3,581,070	+				+0.8
3,581,070	+				+0.0
3,581,070	+				+0.1
3,581,070	+				-1.2
3,581,070	+				-0.8
3,581,070	+				-1.1
3,581,070	+				-1.0
3,581,070	+				+0.8
3,581,070	+				-1.9
3,581,070	+				-1.4
3,581,070	+				+5.0
3,581,070	+				-0.4
3,581,132	+				-2.0
3,581,132	+				+0.6
3,581,132	+				-0.5
3,581,132	+				-2.6
3,581,272	+		AMB_RS16665	0.16	+0.1
3,581,272	+		AMB_RS16665	0.16	-1.9
3,581,272	+		AMB_RS16665	0.16	-2.3
3,581,272	+		AMB_RS16665	0.16	-0.4
3,581,272	+		AMB_RS16665	0.16	-0.4
3,581,272	+		AMB_RS16665	0.16	+2.2
3,581,272	+		AMB_RS16665	0.16	+0.0
3,581,272	+		AMB_RS16665	0.16	+0.0
3,581,273	-		AMB_RS16665	0.16	-1.0
3,581,295	+		AMB_RS16665	0.18	+1.6
3,581,295	+		AMB_RS16665	0.18	-2.1
3,581,296	-		AMB_RS16665	0.18	+0.6
3,581,391	+		AMB_RS16665	0.27	-0.7
3,581,391	+		AMB_RS16665	0.27	+0.0
3,581,392	-		AMB_RS16665	0.27	+0.0
3,581,401	+		AMB_RS16665	0.27	-3.1
3,581,402	-		AMB_RS16665	0.28	-0.9
3,581,402	-		AMB_RS16665	0.28	-0.4
3,581,402	-		AMB_RS16665	0.28	+0.5
3,581,428	+		AMB_RS16665	0.30	-0.6
3,581,429	-		AMB_RS16665	0.30	-2.1