Strain Fitness in Magnetospirillum magneticum AMB-1 around AMB_RS08770

Experiment: 150_an_nonmag_2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	150_an_nonmag_2
1,876,325	+				-1.4
1,876,354	+				-0.1
1,876,361	+				+0.6
1,876,362	-				+0.2
1,876,362	-				-1.4
1,876,380	-				-0.8
1,876,380	-				-0.1
1,876,380	-				-0.4
1,876,386	+				+1.0
1,876,386	+				-1.0
1,876,386	+				+0.6
1,876,386	+				+0.6
1,876,386	+				-0.4
1,876,386	+				-0.1
1,876,386	+				-0.8
1,876,387	-				-0.0
1,876,387	-				-1.6
1,876,387	-				-1.2
1,876,387	-				-0.4
1,876,387	-				-1.0
1,876,387	-				-0.4
1,876,387	-				-0.1
1,876,387	-				-0.8
1,876,387	-				-3.0
1,876,407	+				-0.9
1,876,408	-				-1.4
1,876,408	-				-4.5
1,876,571	+				-1.5
1,876,572	-				-0.5
1,876,572	-				-2.0
1,876,572	-				-0.7
1,876,572	-				-0.1
1,876,572	-				+0.9
1,876,585	+				-1.6
1,876,585	+				-1.4
1,876,585	+				-1.0
1,876,586	-				-1.4
1,876,602	-				+1.6
1,876,602	-				-1.8
1,876,626	+				+0.1
1,876,626	+				-0.4
1,876,626	+				-1.2
1,876,627	-				-1.2
1,876,627	-				-0.1
1,876,677	+				+0.4
1,876,678	-				-0.0
1,876,721	+				+0.6
1,876,757	-				-0.4
1,877,050	+		AMB_RS08765	0.31	-0.0
1,877,051	-		AMB_RS08765	0.32	-0.4
1,877,051	-		AMB_RS08765	0.32	-0.8
1,877,051	-		AMB_RS08765	0.32	+0.2
1,877,052	+		AMB_RS08765	0.32	+0.9
1,877,052	+		AMB_RS08765	0.32	+0.2
1,877,052	+		AMB_RS08765	0.32	-1.9
1,877,053	-		AMB_RS08765	0.32	-0.5
1,877,053	-		AMB_RS08765	0.32	+1.2
1,877,053	-		AMB_RS08765	0.32	+0.1
1,877,053	-		AMB_RS08765	0.32	-0.5
1,877,053	-		AMB_RS08765	0.32	-0.4
1,877,053	-		AMB_RS08765	0.32	+2.6
1,877,053	-		AMB_RS08765	0.32	-1.4
1,877,053	-		AMB_RS08765	0.32	-0.0
1,877,053	-		AMB_RS08765	0.32	-0.0
1,877,099	+		AMB_RS08765	0.45	-0.8
1,877,100	-		AMB_RS08765	0.45	+1.0
1,877,160	+		AMB_RS08765	0.62	-0.5
1,877,161	-		AMB_RS08765	0.63	-0.3
1,877,175	+		AMB_RS08765	0.67	-1.8
1,877,175	+		AMB_RS08765	0.67	-1.3
1,877,175	+		AMB_RS08765	0.67	-0.8
1,877,175	+		AMB_RS08765	0.67	-0.3
1,877,176	-		AMB_RS08765	0.67	+0.1
1,877,176	-		AMB_RS08765	0.67	+1.7
1,877,176	-		AMB_RS08765	0.67	-0.4
1,877,176	-		AMB_RS08765	0.67	-0.2
1,877,176	-		AMB_RS08765	0.67	-0.2
1,877,177	+		AMB_RS08765	0.67	+0.0
1,877,177	+		AMB_RS08765	0.67	+0.2
1,877,177	+		AMB_RS08765	0.67	-0.4
1,877,178	-		AMB_RS08765	0.68	-1.2
1,877,178	-		AMB_RS08765	0.68	-1.2
1,877,185	+		AMB_RS08765	0.69	-1.0
1,877,185	+		AMB_RS08765	0.69	-1.9
1,877,185	+		AMB_RS08765	0.69	+0.4
1,877,186	-		AMB_RS08765	0.70	-1.2
1,877,192	+		AMB_RS08765	0.71	-0.8
1,877,219	+		AMB_RS08765	0.79	+1.6
1,877,219	+		AMB_RS08765	0.79	-0.8
1,877,220	-		AMB_RS08765	0.79	-1.9
1,877,220	-		AMB_RS08765	0.79	+0.9
1,877,220	-		AMB_RS08765	0.79	-0.3
1,877,220	-		AMB_RS08765	0.79	+0.6
1,877,220	-		AMB_RS08765	0.79	+0.8
1,877,220	-		AMB_RS08765	0.79	-0.8
1,877,220	-		AMB_RS08765	0.79	+1.6
1,877,220	-		AMB_RS08765	0.79	-0.5
1,877,220	-		AMB_RS08765	0.79	-0.4
1,877,272	+				-1.8
1,877,273	-				-0.4
1,877,273	-				-0.3
1,877,306	+				-0.1
1,877,492	-		AMB_RS08770	0.22	-0.0
1,877,506	+		AMB_RS08770	0.23	-0.4
1,877,507	-		AMB_RS08770	0.23	-1.0
1,877,507	-		AMB_RS08770	0.23	-0.8
1,877,507	-		AMB_RS08770	0.23	-1.0
1,877,572	+		AMB_RS08770	0.31	+0.2
1,877,572	+		AMB_RS08770	0.31	+1.6
1,877,573	-		AMB_RS08770	0.31	-1.0
1,877,573	-		AMB_RS08770	0.31	-5.2
1,877,629	+		AMB_RS08770	0.37	-0.0
1,877,630	-		AMB_RS08770	0.37	-0.4
1,877,642	+		AMB_RS08770	0.39	-0.9
1,877,642	+		AMB_RS08770	0.39	-1.0
1,877,682	-		AMB_RS08770	0.43	-0.0
1,877,682	-		AMB_RS08770	0.43	-0.3
1,877,837	+		AMB_RS08770	0.61	-2.0
1,877,837	+		AMB_RS08770	0.61	+0.1
1,877,838	-		AMB_RS08770	0.61	-2.0
1,877,838	-		AMB_RS08770	0.61	-0.0
1,877,838	-		AMB_RS08770	0.61	-1.9
1,877,838	-		AMB_RS08770	0.61	+0.2
1,877,843	+		AMB_RS08770	0.62	-1.3
1,877,843	+		AMB_RS08770	0.62	-0.9
1,877,844	-		AMB_RS08770	0.62	+1.6
1,877,844	-		AMB_RS08770	0.62	-0.7
1,877,844	-		AMB_RS08770	0.62	-2.0
1,877,844	-		AMB_RS08770	0.62	-1.4
1,877,855	-		AMB_RS08770	0.63	-0.5
1,877,958	+		AMB_RS08770	0.75	+0.6
1,877,958	+		AMB_RS08770	0.75	+0.1
1,877,958	+		AMB_RS08770	0.75	+0.5
1,877,958	+		AMB_RS08770	0.75	-0.0
1,877,958	+		AMB_RS08770	0.75	+0.7
1,877,959	-		AMB_RS08770	0.75	-1.1
1,877,959	-		AMB_RS08770	0.75	-0.8
1,877,959	-		AMB_RS08770	0.75	-1.6
1,877,959	-		AMB_RS08770	0.75	-0.3
1,877,959	-		AMB_RS08770	0.75	+0.6
1,877,984	+		AMB_RS08770	0.78	+0.3
1,877,985	-		AMB_RS08770	0.78	-0.3
1,878,080	+		AMB_RS08770	0.89	-0.5
1,878,081	-		AMB_RS08770	0.90	-3.5
1,878,081	-		AMB_RS08770	0.90	-2.6
1,878,081	-		AMB_RS08770	0.90	-1.0
1,878,394	+		AMB_RS23745	0.25	+0.5
1,878,394	+		AMB_RS23745	0.25	-2.0
1,878,435	+		AMB_RS23745	0.36	-0.6
1,878,435	+		AMB_RS23745	0.36	-1.8
1,878,435	+		AMB_RS23745	0.36	+0.4
1,878,435	+		AMB_RS23745	0.36	-2.1
1,878,597	+		AMB_RS23745	0.81	+0.3
1,878,597	+		AMB_RS23745	0.81	-0.0
1,878,597	+		AMB_RS23745	0.81	+0.6
1,878,597	+		AMB_RS23745	0.81	-0.0
1,878,598	-		AMB_RS23745	0.81	-0.9
1,878,598	-		AMB_RS23745	0.81	+0.6
1,878,598	-		AMB_RS23745	0.81	-0.4
1,878,598	-		AMB_RS23745	0.81	+0.6
1,878,598	-		AMB_RS23745	0.81	-0.5
1,878,653	-				-0.3
1,878,655	+				-4.1
1,878,656	-				-1.6
1,878,696	+				-1.4
1,878,696	+				-0.0
1,878,741	-				-3.1
1,878,982	+				+0.2
1,878,982	+				-3.0
1,878,983	-				-0.5
1,879,078	+				-1.0
1,879,094	-				-1.6
1,879,094	-				+0.2
1,879,123	-				-2.4
1,879,123	-				-0.0