Strain Fitness in Magnetospirillum magneticum AMB-1 around AMB_RS05780

Experiment: 150_an_nonmag_2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	150_an_nonmag_2
1,215,073	-		AMB_RS05770	0.89	-0.7
1,215,073	-		AMB_RS05770	0.89	+0.0
1,215,073	-		AMB_RS05770	0.89	-2.2
1,215,073	-		AMB_RS05770	0.89	-2.0
1,215,184	-				+0.4
1,215,191	+				-0.3
1,215,191	+				-1.6
1,215,192	-				-0.1
1,215,192	-				+0.6
1,215,205	+				-2.1
1,215,244	+				+3.4
1,215,244	+				+0.6
1,215,244	+				-0.9
1,215,263	-				+0.0
1,215,263	-				-1.1
1,215,306	+				-0.4
1,215,326	+				-1.0
1,215,326	+				-1.4
1,215,421	+		AMB_RS05775	0.19	+0.7
1,215,421	+		AMB_RS05775	0.19	-1.4
1,215,422	-		AMB_RS05775	0.19	-0.4
1,215,422	-		AMB_RS05775	0.19	+0.1
1,215,423	+		AMB_RS05775	0.20	-2.8
1,215,423	+		AMB_RS05775	0.20	-0.5
1,215,423	+		AMB_RS05775	0.20	-1.0
1,215,423	+		AMB_RS05775	0.20	-1.0
1,215,424	-		AMB_RS05775	0.20	-0.7
1,215,424	-		AMB_RS05775	0.20	+0.1
1,215,424	-		AMB_RS05775	0.20	-2.2
1,215,424	-		AMB_RS05775	0.20	-0.7
1,215,492	+		AMB_RS05775	0.29	+0.0
1,215,492	+		AMB_RS05775	0.29	-3.1
1,215,493	-		AMB_RS05775	0.29	-2.1
1,215,573	+		AMB_RS05775	0.40	+0.0
1,215,574	-		AMB_RS05775	0.40	+0.6
1,215,574	-		AMB_RS05775	0.40	-0.7
1,215,590	-		AMB_RS05775	0.42	-0.2
1,215,613	+		AMB_RS05775	0.45	-1.4
1,215,613	+		AMB_RS05775	0.45	-2.5
1,215,613	+		AMB_RS05775	0.45	-1.6
1,215,614	-		AMB_RS05775	0.46	-0.7
1,215,691	+		AMB_RS05775	0.56	-0.5
1,215,692	-		AMB_RS05775	0.56	-1.6
1,215,692	-		AMB_RS05775	0.56	+0.4
1,215,692	-		AMB_RS05775	0.56	-0.7
1,215,692	-		AMB_RS05775	0.56	-2.7
1,215,692	-		AMB_RS05775	0.56	-0.7
1,215,767	+		AMB_RS05775	0.67	-0.9
1,215,767	+		AMB_RS05775	0.67	-0.3
1,215,768	-		AMB_RS05775	0.67	-0.7
1,215,768	-		AMB_RS05775	0.67	+0.0
1,215,978	+				-1.1
1,215,979	-				-4.1
1,216,004	+				-2.6
1,216,005	-				-1.4
1,216,005	-				-3.3
1,216,029	+				-1.8
1,216,029	+				-2.4
1,216,029	+				+1.6
1,216,030	-				-1.2
1,216,093	+				+0.4
1,216,093	+				-1.0
1,216,094	-				-1.0
1,216,096	+				-0.2
1,216,096	+				-1.4
1,216,096	+				+0.7
1,216,096	+				-1.7
1,216,096	+				+0.0
1,216,097	-				-2.0
1,216,097	-				-1.7
1,216,097	-				-2.2
1,216,223	+				+0.0
1,216,239	+				-0.2
1,216,240	-				-0.6
1,216,392	+				-0.3
1,216,392	+				+0.0
1,216,392	+				+0.6
1,216,392	+				+0.8
1,216,392	+				-1.4
1,216,392	+				+0.0
1,216,392	+				-1.0
1,216,392	+				-2.0
1,216,392	+				-2.2
1,216,392	+				-0.7
1,216,392	+				-0.4
1,216,393	-				-0.5
1,216,393	-				-0.7
1,216,393	-				+0.2
1,216,393	-				-0.4
1,216,393	-				-2.7
1,216,426	+				+1.6
1,216,427	-				-0.9
1,216,501	-				-0.1
1,216,636	-				-2.2
1,216,638	-				-2.4
1,216,795	+		AMB_RS05780	0.12	-0.4
1,217,095	-		AMB_RS05780	0.17	-1.6
1,217,268	+		AMB_RS05780	0.20	-1.0
1,217,269	-		AMB_RS05780	0.20	+0.0
1,217,269	-		AMB_RS05780	0.20	-0.6
1,217,269	-		AMB_RS05780	0.20	-3.2
1,217,269	-		AMB_RS05780	0.20	-3.5
1,217,269	-		AMB_RS05780	0.20	-1.8
1,217,269	-		AMB_RS05780	0.20	-0.9
1,217,283	-		AMB_RS05780	0.20	-1.7
1,217,424	+		AMB_RS05780	0.22	-2.6
1,217,424	+		AMB_RS05780	0.22	-0.6
1,217,425	-		AMB_RS05780	0.22	+0.0
1,217,425	-		AMB_RS05780	0.22	+0.6
1,217,514	-		AMB_RS05780	0.24	-0.3
1,217,751	+		AMB_RS05780	0.27	+0.0
1,217,752	-		AMB_RS05780	0.27	-0.3
1,217,752	-		AMB_RS05780	0.27	+0.1
1,217,752	-		AMB_RS05780	0.27	-0.0
1,218,087	+		AMB_RS05780	0.33	-1.6
1,218,087	+		AMB_RS05780	0.33	-1.4
1,218,087	+		AMB_RS05780	0.33	-1.2
1,218,087	+		AMB_RS05780	0.33	-1.7
1,218,087	+		AMB_RS05780	0.33	-0.4
1,218,087	+		AMB_RS05780	0.33	-1.9
1,218,087	+		AMB_RS05780	0.33	+1.6
1,218,087	+		AMB_RS05780	0.33	+0.4
1,218,087	+		AMB_RS05780	0.33	-1.3
1,218,088	-		AMB_RS05780	0.33	+0.4
1,218,088	-		AMB_RS05780	0.33	+0.0
1,218,088	-		AMB_RS05780	0.33	-0.1
1,218,088	-		AMB_RS05780	0.33	-0.2
1,218,088	-		AMB_RS05780	0.33	-0.4
1,218,088	-		AMB_RS05780	0.33	-0.3
1,218,201	-		AMB_RS05780	0.34	+0.5
1,218,423	+		AMB_RS05780	0.38	-2.9
1,218,423	+		AMB_RS05780	0.38	-3.3
1,218,423	+		AMB_RS05780	0.38	-2.4
1,218,423	+		AMB_RS05780	0.38	+2.1
1,218,423	+		AMB_RS05780	0.38	-4.9
1,218,423	+		AMB_RS05780	0.38	-0.4
1,218,423	+		AMB_RS05780	0.38	-0.4
1,218,423	+		AMB_RS05780	0.38	-0.4
1,218,423	+		AMB_RS05780	0.38	-0.7
1,218,423	+		AMB_RS05780	0.38	-0.7
1,218,423	+		AMB_RS05780	0.38	+0.6
1,218,424	-		AMB_RS05780	0.38	+0.5
1,218,424	-		AMB_RS05780	0.38	-0.1
1,218,424	-		AMB_RS05780	0.38	+0.4
1,218,424	-		AMB_RS05780	0.38	-2.4
1,218,424	-		AMB_RS05780	0.38	-0.4
1,218,424	-		AMB_RS05780	0.38	-1.2
1,218,424	-		AMB_RS05780	0.38	+0.6
1,218,453	-		AMB_RS05780	0.38	-0.7
1,218,467	+		AMB_RS05780	0.38	+0.3
1,218,467	+		AMB_RS05780	0.38	-1.7
1,218,467	+		AMB_RS05780	0.38	-1.0
1,218,468	-		AMB_RS05780	0.38	-2.1
1,218,585	+		AMB_RS05780	0.40	-0.4
1,218,585	+		AMB_RS05780	0.40	+0.0
1,218,586	-		AMB_RS05780	0.40	+1.2
1,218,639	-		AMB_RS05780	0.41	-2.1
1,218,639	-		AMB_RS05780	0.41	-1.7
1,218,642	+		AMB_RS05780	0.41	+0.6
1,218,642	+		AMB_RS05780	0.41	-3.4
1,218,642	+		AMB_RS05780	0.41	-2.6
1,218,642	+		AMB_RS05780	0.41	-1.2
1,218,642	+		AMB_RS05780	0.41	+1.7
1,218,642	+		AMB_RS05780	0.41	+0.0
1,218,642	+		AMB_RS05780	0.41	-0.7
1,218,642	+		AMB_RS05780	0.41	-1.2
1,218,642	+		AMB_RS05780	0.41	-0.2
1,218,643	-		AMB_RS05780	0.41	-0.3
1,218,643	-		AMB_RS05780	0.41	+0.0
1,218,643	-		AMB_RS05780	0.41	+0.3
1,218,643	-		AMB_RS05780	0.41	+0.8
1,218,643	-		AMB_RS05780	0.41	-1.0
1,218,643	-		AMB_RS05780	0.41	-0.2
1,218,643	-		AMB_RS05780	0.41	+0.4
1,218,643	-		AMB_RS05780	0.41	-1.2
1,218,689	+		AMB_RS05780	0.42	-0.2
1,218,717	+		AMB_RS05780	0.42	-1.6
1,218,717	+		AMB_RS05780	0.42	+0.5
1,218,717	+		AMB_RS05780	0.42	+1.0
1,218,718	-		AMB_RS05780	0.42	+1.6
1,218,718	-		AMB_RS05780	0.42	-1.7
1,218,718	-		AMB_RS05780	0.42	-1.6
1,218,718	-		AMB_RS05780	0.42	-2.9
1,218,718	-		AMB_RS05780	0.42	-0.1
1,218,718	-		AMB_RS05780	0.42	-0.2
1,218,729	+		AMB_RS05780	0.43	-0.4
1,218,729	+		AMB_RS05780	0.43	+0.1
1,218,729	+		AMB_RS05780	0.43	-0.4
1,218,729	+		AMB_RS05780	0.43	-0.2
1,218,730	-		AMB_RS05780	0.43	-3.4
1,218,730	-		AMB_RS05780	0.43	-1.9
1,218,730	-		AMB_RS05780	0.43	-0.4
1,218,822	+		AMB_RS05780	0.44	-1.6
1,218,823	-		AMB_RS05780	0.44	-1.1
1,218,823	-		AMB_RS05780	0.44	-0.3
1,218,823	-		AMB_RS05780	0.44	+0.6
1,218,823	-		AMB_RS05780	0.44	-2.1
1,218,823	-		AMB_RS05780	0.44	-3.4
1,218,824	+		AMB_RS05780	0.44	-0.7
1,218,825	-		AMB_RS05780	0.44	-1.7
1,218,893	+		AMB_RS05780	0.45	-2.6
1,218,894	-		AMB_RS05780	0.45	-1.0
1,218,894	-		AMB_RS05780	0.45	-0.7
1,218,894	-		AMB_RS05780	0.45	-0.1
1,218,894	-		AMB_RS05780	0.45	+1.6
1,218,978	+		AMB_RS05780	0.46	+0.1
1,218,978	+		AMB_RS05780	0.46	+0.7
1,218,979	-		AMB_RS05780	0.46	+0.5
1,218,979	-		AMB_RS05780	0.46	-2.9
1,218,979	-		AMB_RS05780	0.46	-0.7
1,219,080	+		AMB_RS05780	0.48	+0.4
1,219,118	+		AMB_RS05780	0.49	-1.0
1,219,119	-		AMB_RS05780	0.49	-0.8
1,219,119	-		AMB_RS05780	0.49	+0.1
1,219,119	-		AMB_RS05780	0.49	-1.1
1,219,119	-		AMB_RS05780	0.49	-0.4
1,219,127	+		AMB_RS05780	0.49	-0.7
1,219,236	+		AMB_RS05780	0.50	-1.9
1,219,237	-		AMB_RS05780	0.51	-0.7
1,219,239	+		AMB_RS05780	0.51	-0.4
1,219,239	+		AMB_RS05780	0.51	+0.6
1,219,239	+		AMB_RS05780	0.51	-0.5
1,219,240	-		AMB_RS05780	0.51	-0.8
1,219,272	+		AMB_RS05780	0.51	-0.0
1,219,272	+		AMB_RS05780	0.51	-3.3
1,219,273	-		AMB_RS05780	0.51	-0.6
1,219,273	-		AMB_RS05780	0.51	+0.1
1,219,287	+		AMB_RS05780	0.51	-0.1
1,219,288	-		AMB_RS05780	0.51	+0.1
1,219,363	-		AMB_RS05780	0.52	+0.6
1,219,363	-		AMB_RS05780	0.52	-1.0
1,219,599	+		AMB_RS05780	0.56	-0.7
1,219,599	+		AMB_RS05780	0.56	+0.0
1,219,599	+		AMB_RS05780	0.56	+1.5
1,219,599	+		AMB_RS05780	0.56	+1.6
1,219,599	+		AMB_RS05780	0.56	-0.2
1,219,600	-		AMB_RS05780	0.56	-2.1
1,219,600	-		AMB_RS05780	0.56	+0.4
1,219,600	-		AMB_RS05780	0.56	+0.4
1,219,600	-		AMB_RS05780	0.56	-1.0
1,219,600	-		AMB_RS05780	0.56	+0.0
1,219,600	-		AMB_RS05780	0.56	+0.1
1,219,600	-		AMB_RS05780	0.56	-2.3
1,219,600	-		AMB_RS05780	0.56	+0.6
1,219,600	-		AMB_RS05780	0.56	-0.5
1,219,600	-		AMB_RS05780	0.56	+1.6
1,219,600	-		AMB_RS05780	0.56	-1.0
1,219,600	-		AMB_RS05780	0.56	+0.5
1,219,633	-		AMB_RS05780	0.57	+1.6
1,219,707	+		AMB_RS05780	0.58	-0.2
1,219,707	+		AMB_RS05780	0.58	+0.6
1,219,708	-		AMB_RS05780	0.58	+0.4
1,219,708	-		AMB_RS05780	0.58	-0.4
1,219,944	+		AMB_RS05780	0.62	+0.6
1,219,945	-		AMB_RS05780	0.62	-3.2
1,219,945	-		AMB_RS05780	0.62	-0.4
1,219,945	-		AMB_RS05780	0.62	-1.2
1,219,978	-		AMB_RS05780	0.62	-0.7
1,219,992	+		AMB_RS05780	0.62	-0.6
1,219,993	-		AMB_RS05780	0.62	+0.0
1,219,994	+		AMB_RS05780	0.62	-0.7
1,219,995	-		AMB_RS05780	0.62	-0.1
1,220,052	+		AMB_RS05780	0.63	-0.6
1,220,052	+		AMB_RS05780	0.63	-0.3
1,220,052	+		AMB_RS05780	0.63	+0.9
1,220,053	-		AMB_RS05780	0.63	+1.1
1,220,053	-		AMB_RS05780	0.63	+0.6
1,220,289	+		AMB_RS05780	0.67	-2.3
1,220,290	-		AMB_RS05780	0.67	-0.3
1,220,290	-		AMB_RS05780	0.67	+0.0
1,220,495	+		AMB_RS05780	0.70	-1.2
1,220,586	+		AMB_RS05780	0.72	-2.2
1,220,586	+		AMB_RS05780	0.72	-1.9
1,220,586	+		AMB_RS05780	0.72	-0.2
1,220,587	-		AMB_RS05780	0.72	-2.3
1,220,587	-		AMB_RS05780	0.72	-0.7
1,220,587	-		AMB_RS05780	0.72	+2.6
1,220,589	+		AMB_RS05780	0.72	-1.0
1,220,589	+		AMB_RS05780	0.72	-0.2
1,220,589	+		AMB_RS05780	0.72	-1.0
1,220,590	-		AMB_RS05780	0.72	-1.0
1,220,590	-		AMB_RS05780	0.72	-2.1
1,220,590	-		AMB_RS05780	0.72	+0.6
1,220,590	-		AMB_RS05780	0.72	-1.0
1,220,590	-		AMB_RS05780	0.72	+1.6
1,220,590	-		AMB_RS05780	0.72	-0.7
1,220,713	-		AMB_RS05780	0.74	-1.4
1,220,770	+		AMB_RS05780	0.74	-0.2
1,220,770	+		AMB_RS05780	0.74	+0.8
1,220,771	-		AMB_RS05780	0.75	-0.4
1,220,771	-		AMB_RS05780	0.75	-4.5
1,220,771	-		AMB_RS05780	0.75	+0.0
1,220,771	-		AMB_RS05780	0.75	-0.6
1,220,771	-		AMB_RS05780	0.75	-0.7
1,220,949	+		AMB_RS05780	0.77	-1.4
1,220,986	-		AMB_RS05780	0.78	-1.4
1,220,986	-		AMB_RS05780	0.78	-0.6
1,220,986	-		AMB_RS05780	0.78	-0.2
1,221,158	+		AMB_RS05780	0.81	-3.4
1,221,231	+		AMB_RS05780	0.82	-0.2
1,221,232	-		AMB_RS05780	0.82	+0.0
1,221,233	+		AMB_RS05780	0.82	-0.7
1,221,233	+		AMB_RS05780	0.82	-1.0
1,221,233	+		AMB_RS05780	0.82	-1.1
1,221,233	+		AMB_RS05780	0.82	-0.4
1,221,234	-		AMB_RS05780	0.82	-0.3
1,221,234	-		AMB_RS05780	0.82	-0.1
1,221,291	+		AMB_RS05780	0.83	-0.9
1,221,291	+		AMB_RS05780	0.83	-0.6
1,221,292	-		AMB_RS05780	0.83	-0.4
1,221,292	-		AMB_RS05780	0.83	-1.3
1,221,510	-		AMB_RS05780	0.86	-0.4
1,221,606	-		AMB_RS05780	0.88	-0.4
1,222,376	+				+0.3
1,222,376	+				-2.2
1,222,377	-				+0.6
1,222,377	-				-0.4
1,222,377	-				+1.6
1,222,420	+				-1.3
1,222,420	+				+0.6
1,222,420	+				-2.0
1,222,420	+				-2.0
1,222,420	+				+0.2
1,222,421	-				-1.0
1,222,421	-				-2.0
1,222,421	-				-0.2
1,222,421	-				-0.2
1,222,628	+		AMB_RS05785	0.13	+0.2
1,222,733	+		AMB_RS05785	0.19	-0.2
1,222,733	+		AMB_RS05785	0.19	-1.7
1,222,733	+		AMB_RS05785	0.19	-2.2
1,222,733	+		AMB_RS05785	0.19	-0.1
1,222,735	+		AMB_RS05785	0.19	-0.4
1,222,735	+		AMB_RS05785	0.19	-1.2
1,222,779	-		AMB_RS05785	0.22	-3.0
1,222,811	+		AMB_RS05785	0.24	-1.6
1,222,811	+		AMB_RS05785	0.24	+0.9
1,222,811	+		AMB_RS05785	0.24	-0.0
1,222,812	-		AMB_RS05785	0.24	-0.2
1,222,883	+		AMB_RS05785	0.28	+0.0
1,222,883	+		AMB_RS05785	0.28	-0.4
1,222,883	+		AMB_RS05785	0.28	-2.1
1,222,883	+		AMB_RS05785	0.28	-0.1
1,222,884	-		AMB_RS05785	0.28	-0.4
1,222,939	+		AMB_RS05785	0.31	-1.4
1,222,939	+		AMB_RS05785	0.31	-2.5
1,223,166	+		AMB_RS05785	0.44	-1.2
1,223,166	+		AMB_RS05785	0.44	+0.8
1,223,167	-		AMB_RS05785	0.44	-1.0
1,223,167	-		AMB_RS05785	0.44	-1.0
1,223,224	+		AMB_RS05785	0.48	+0.3
1,223,224	+		AMB_RS05785	0.48	-0.5
1,223,225	-		AMB_RS05785	0.48	-0.1
1,223,330	+		AMB_RS05785	0.54	+0.2
1,223,330	+		AMB_RS05785	0.54	-2.8
1,223,331	-		AMB_RS05785	0.54	-1.0