Strain Fitness in Magnetospirillum magneticum AMB-1 around AMB_RS05325

Experiment: 150_an_nonmag_2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	150_an_nonmag_2
1,104,200	+		AMB_RS05320	0.78	-3.3
1,104,200	+		AMB_RS05320	0.78	+1.6
1,104,201	-		AMB_RS05320	0.78	-0.2
1,104,201	-		AMB_RS05320	0.78	+1.6
1,104,201	-		AMB_RS05320	0.78	-2.1
1,104,201	-		AMB_RS05320	0.78	-0.2
1,104,201	-		AMB_RS05320	0.78	-0.0
1,104,201	-		AMB_RS05320	0.78	-0.5
1,104,201	-		AMB_RS05320	0.78	-2.1
1,104,370	+				-1.0
1,104,370	+				-0.4
1,104,370	+				-0.2
1,104,370	+				-0.4
1,104,370	+				+0.0
1,104,370	+				-1.8
1,104,371	-				-0.0
1,104,371	-				-0.2
1,104,371	-				-0.4
1,104,371	-				-1.1
1,104,371	-				-2.0
1,104,449	+				-1.4
1,104,449	+				+1.0
1,104,509	+				-0.4
1,104,509	+				-1.4
1,104,509	+				+0.0
1,104,510	-				-1.4
1,104,510	-				-0.9
1,104,510	-				-1.0
1,104,510	-				-1.4
1,104,510	-				-0.7
1,104,510	-				+0.0
1,104,587	+				+0.6
1,104,587	+				-0.1
1,104,587	+				-0.5
1,104,588	-				+0.6
1,104,643	-				-1.6
1,104,674	+				-1.2
1,104,674	+				+0.0
1,104,674	+				+1.0
1,104,675	-				-1.0
1,104,675	-				+0.6
1,104,823	+				-1.9
1,104,824	-				+1.6
1,104,824	-				+0.0
1,104,824	-				-0.3
1,104,854	+				+0.6
1,104,873	+				+0.4
1,104,874	-				-2.5
1,104,874	-				-2.6
1,104,877	+				-3.0
1,104,877	+				+0.3
1,104,878	-				+0.1
1,104,878	-				-0.5
1,104,887	-				-2.6
1,104,902	+				-0.4
1,104,998	-				-0.7
1,104,998	-				-0.5
1,104,998	-				-2.1
1,104,998	-				-0.6
1,105,070	+				-0.4
1,105,070	+				-0.3
1,105,125	+		AMB_RS05325	0.13	-0.7
1,105,126	-		AMB_RS05325	0.13	-0.4
1,105,126	-		AMB_RS05325	0.13	-2.6
1,105,126	-		AMB_RS05325	0.13	-0.0
1,105,204	+		AMB_RS05325	0.21	-2.4
1,105,229	-		AMB_RS05325	0.23	+0.6
1,105,238	+		AMB_RS05325	0.24	-2.6
1,105,238	+		AMB_RS05325	0.24	-0.4
1,105,239	-		AMB_RS05325	0.24	+0.6
1,105,239	-		AMB_RS05325	0.24	-0.3
1,105,239	-		AMB_RS05325	0.24	-1.6
1,105,239	-		AMB_RS05325	0.24	-0.2
1,105,240	+		AMB_RS05325	0.24	-1.0
1,105,240	+		AMB_RS05325	0.24	-0.4
1,105,240	+		AMB_RS05325	0.24	+0.4
1,105,241	-		AMB_RS05325	0.24	-0.3
1,105,241	-		AMB_RS05325	0.24	-0.1
1,105,241	-		AMB_RS05325	0.24	-0.8
1,105,241	-		AMB_RS05325	0.24	-0.7
1,105,241	-		AMB_RS05325	0.24	-2.5
1,105,288	-		AMB_RS05325	0.29	-0.8
1,105,303	-		AMB_RS05325	0.31	+0.6
1,105,402	+		AMB_RS05325	0.41	-1.5
1,105,402	+		AMB_RS05325	0.41	+0.8
1,105,402	+		AMB_RS05325	0.41	+0.3
1,105,403	-		AMB_RS05325	0.41	+0.0
1,105,477	+		AMB_RS05325	0.48	+0.2
1,105,477	+		AMB_RS05325	0.48	+0.0
1,105,478	-		AMB_RS05325	0.48	-0.4
1,105,478	-		AMB_RS05325	0.48	-2.2
1,105,478	-		AMB_RS05325	0.48	+0.2
1,105,478	-		AMB_RS05325	0.48	-1.0
1,105,478	-		AMB_RS05325	0.48	+0.6
1,105,572	+		AMB_RS05325	0.58	-2.1
1,105,572	+		AMB_RS05325	0.58	-0.4
1,105,572	+		AMB_RS05325	0.58	+0.3
1,105,572	+		AMB_RS05325	0.58	+0.8
1,105,572	+		AMB_RS05325	0.58	-1.4
1,105,572	+		AMB_RS05325	0.58	+0.6
1,105,572	+		AMB_RS05325	0.58	+0.0
1,105,572	+		AMB_RS05325	0.58	+0.1
1,105,573	-		AMB_RS05325	0.58	+0.0
1,105,573	-		AMB_RS05325	0.58	-1.0
1,105,573	-		AMB_RS05325	0.58	-3.0
1,105,573	-		AMB_RS05325	0.58	-1.4
1,105,715	+		AMB_RS05325	0.72	-3.0
1,105,715	+		AMB_RS05325	0.72	-0.3
1,105,715	+		AMB_RS05325	0.72	+0.0
1,105,715	+		AMB_RS05325	0.72	+0.6
1,105,715	+		AMB_RS05325	0.72	-2.5
1,105,715	+		AMB_RS05325	0.72	-0.8
1,105,715	+		AMB_RS05325	0.72	-1.1
1,105,715	+		AMB_RS05325	0.72	-2.2
1,105,716	-		AMB_RS05325	0.72	-1.4
1,105,716	-		AMB_RS05325	0.72	-0.6
1,105,716	-		AMB_RS05325	0.72	-1.6
1,105,716	-		AMB_RS05325	0.72	+0.0
1,105,716	-		AMB_RS05325	0.72	-3.4
1,105,716	-		AMB_RS05325	0.72	-0.8
1,105,716	-		AMB_RS05325	0.72	-1.4
1,105,716	-		AMB_RS05325	0.72	-0.6
1,105,716	-		AMB_RS05325	0.72	-1.1
1,105,716	-		AMB_RS05325	0.72	-0.5
1,105,716	-		AMB_RS05325	0.72	-1.0
1,105,716	-		AMB_RS05325	0.72	-1.0
1,105,717	+		AMB_RS05325	0.72	-0.1
1,105,717	+		AMB_RS05325	0.72	+0.2
1,105,717	+		AMB_RS05325	0.72	-0.4
1,105,717	+		AMB_RS05325	0.72	+0.1
1,105,718	-		AMB_RS05325	0.72	-2.6
1,105,987	+				-1.2
1,106,030	+				-0.5
1,106,195	+				-0.4
1,106,196	-				-0.7
1,106,346	+		AMB_RS23985	0.16	+1.6
1,106,346	+		AMB_RS23985	0.16	+0.0
1,106,388	+		AMB_RS23985	0.18	-0.7
1,106,388	+		AMB_RS23985	0.18	-0.3
1,106,389	-		AMB_RS23985	0.18	+0.6
1,106,497	-		AMB_RS23985	0.23	-0.5
1,106,497	-		AMB_RS23985	0.23	-0.1
1,106,497	-		AMB_RS23985	0.23	+5.0
1,106,497	-		AMB_RS23985	0.23	-2.4
1,106,499	+		AMB_RS23985	0.23	-0.7
1,106,499	+		AMB_RS23985	0.23	+0.6
1,106,500	-		AMB_RS23985	0.23	+0.6
1,106,519	+		AMB_RS23985	0.24	-2.1
1,106,649	+		AMB_RS23985	0.29	+0.0
1,106,665	+		AMB_RS23985	0.30	-1.4
1,106,666	-		AMB_RS23985	0.30	-1.6
1,106,730	+		AMB_RS23985	0.33	-0.2
1,106,731	-		AMB_RS23985	0.33	+0.7
1,106,731	-		AMB_RS23985	0.33	-0.4
1,106,733	-		AMB_RS23985	0.33	+0.6
1,106,733	-		AMB_RS23985	0.33	-0.4
1,106,733	-		AMB_RS23985	0.33	-0.4
1,106,808	-		AMB_RS23985	0.36	+0.6
1,106,808	-		AMB_RS23985	0.36	-1.0
1,106,808	-		AMB_RS23985	0.36	-1.6
1,106,831	+		AMB_RS23985	0.37	-0.6
1,106,876	+		AMB_RS23985	0.39	-0.2
1,106,876	+		AMB_RS23985	0.39	-0.1
1,106,876	+		AMB_RS23985	0.39	-2.6
1,106,877	-		AMB_RS23985	0.39	-0.2
1,106,912	+		AMB_RS23985	0.41	-0.7
1,106,912	+		AMB_RS23985	0.41	+0.1
1,106,913	-		AMB_RS23985	0.41	-1.2
1,106,913	-		AMB_RS23985	0.41	-0.3