Strain Fitness in Escherichia coli BW25113 around b2926
Experiment: Spectinomycin 0.00625 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | Spectinomycin 0.00625 mg/ml |
|---|---|---|---|---|---|
| remove | |||||
| 3,069,297 | - | +0.4 | |||
| 3,069,440 | - | +0.0 | |||
| 3,069,440 | - | +1.0 | |||
| 3,070,816 | - | epd | b2927 | 0.12 | +0.1 |
| 3,071,084 | - | +0.8 | |||
| 3,071,184 | + | epd | b2927 | 0.48 | -1.8 |
| 3,071,199 | - | epd | b2927 | 0.50 | +1.4 |
| 3,071,204 | - | epd | b2927 | 0.50 | +0.4 |
| 3,071,204 | - | epd | b2927 | 0.50 | +0.1 |
| 3,071,230 | + | epd | b2927 | 0.53 | -0.9 |
| 3,071,230 | + | epd | b2927 | 0.53 | -0.4 |
| 3,071,268 | + | epd | b2927 | 0.56 | -0.5 |
| 3,071,294 | + | +0.8 | |||
| 3,071,294 | + | epd | b2927 | 0.59 | +0.9 |
| 3,071,309 | + | epd | b2927 | 0.60 | +0.1 |
| 3,071,450 | + | epd | b2927 | 0.74 | -1.2 |
| 3,071,464 | + | epd | b2927 | 0.75 | -0.5 |
| 3,071,494 | + | epd | b2927 | 0.78 | -0.8 |
| 3,071,536 | + | epd | b2927 | 0.83 | +0.2 |
| 3,071,557 | - | epd | b2927 | 0.85 | -0.8 |
| 3,071,557 | - | epd | b2927 | 0.85 | +0.5 |
| 3,071,600 | - | epd | b2927 | 0.89 | +0.1 |
Or see this region's nucleotide sequence