Strain Fitness in Escherichia coli BW25113 around b0861
Experiment: Spectinomycin 0.00625 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Spectinomycin 0.00625 mg/ml |
---|---|---|---|---|---|
remove | |||||
899,181 | + | artJ | b0860 | 0.16 | -0.9 |
899,189 | - | artJ | b0860 | 0.17 | +0.2 |
899,189 | - | artJ | b0860 | 0.17 | +1.5 |
899,335 | + | artJ | b0860 | 0.37 | +0.8 |
899,487 | - | artJ | b0860 | 0.57 | +0.7 |
899,497 | + | artJ | b0860 | 0.59 | +0.1 |
899,497 | + | artJ | b0860 | 0.59 | -0.0 |
899,515 | - | artJ | b0860 | 0.61 | +1.8 |
899,520 | - | artJ | b0860 | 0.62 | -0.7 |
899,522 | + | artJ | b0860 | 0.62 | -0.1 |
899,522 | + | artJ | b0860 | 0.62 | +0.1 |
899,684 | + | artJ | b0860 | 0.84 | +0.1 |
899,846 | - | +0.5 | |||
900,015 | + | +0.4 | |||
900,140 | - | +0.5 | |||
900,140 | - | -0.3 | |||
900,193 | + | artM | b0861 | 0.16 | -0.5 |
900,258 | - | artM | b0861 | 0.25 | -0.1 |
900,266 | - | artM | b0861 | 0.26 | -1.2 |
900,270 | - | artM | b0861 | 0.27 | -0.8 |
900,330 | - | artM | b0861 | 0.36 | +0.3 |
900,330 | - | artM | b0861 | 0.36 | -0.3 |
900,445 | + | artM | b0861 | 0.53 | -0.2 |
900,596 | - | artM | b0861 | 0.76 | -2.1 |
900,596 | - | artM | b0861 | 0.76 | -0.8 |
900,611 | - | artM | b0861 | 0.78 | +0.1 |
900,611 | - | artM | b0861 | 0.78 | -1.1 |
900,706 | + | -1.1 | |||
900,873 | + | artQ | b0862 | 0.16 | +0.2 |
901,049 | + | artQ | b0862 | 0.41 | +0.5 |
901,059 | + | artQ | b0862 | 0.42 | +0.5 |
901,088 | + | artQ | b0862 | 0.46 | +0.3 |
901,191 | + | artQ | b0862 | 0.61 | -1.5 |
901,191 | + | artQ | b0862 | 0.61 | -0.5 |
901,555 | - | artI | b0863 | 0.10 | +0.3 |
901,590 | - | artI | b0863 | 0.15 | +1.1 |
901,590 | - | artI | b0863 | 0.15 | +0.0 |
901,669 | - | artI | b0863 | 0.26 | -1.5 |
901,669 | - | artI | b0863 | 0.26 | +0.2 |
Or see this region's nucleotide sequence