Strain Fitness in Escherichia coli BW25113 around b0762
Experiment: Spectinomycin 0.00625 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Spectinomycin 0.00625 mg/ml |
---|---|---|---|---|---|
remove | |||||
793,046 | + | -0.6 | |||
793,085 | - | +0.5 | |||
793,085 | - | +2.1 | |||
793,183 | + | modE | b0761 | 0.13 | +0.5 |
793,183 | + | modE | b0761 | 0.13 | +0.8 |
793,191 | - | modE | b0761 | 0.14 | +0.5 |
793,212 | + | modE | b0761 | 0.17 | +2.8 |
793,212 | + | modE | b0761 | 0.17 | -0.2 |
793,213 | - | modE | b0761 | 0.17 | +1.4 |
793,217 | + | modE | b0761 | 0.17 | +0.2 |
793,230 | - | modE | b0761 | 0.19 | +0.3 |
793,230 | - | modE | b0761 | 0.19 | -0.6 |
793,300 | - | modE | b0761 | 0.28 | +1.8 |
793,310 | - | modE | b0761 | 0.29 | +0.5 |
793,538 | - | modE | b0761 | 0.58 | -0.5 |
793,538 | - | modE | b0761 | 0.58 | -0.5 |
793,629 | - | modE | b0761 | 0.70 | +0.8 |
793,629 | - | modE | b0761 | 0.70 | +0.3 |
793,631 | + | modE | b0761 | 0.70 | +1.5 |
793,631 | + | modE | b0761 | 0.70 | -0.5 |
793,636 | + | modE | b0761 | 0.71 | +1.3 |
793,639 | - | modE | b0761 | 0.71 | +0.9 |
793,639 | - | modE | b0761 | 0.71 | +1.1 |
793,639 | - | modE | b0761 | 0.71 | +0.7 |
793,683 | - | modE | b0761 | 0.77 | -0.5 |
793,683 | - | modE | b0761 | 0.77 | +0.8 |
793,685 | + | modE | b0761 | 0.77 | -1.8 |
793,735 | + | modE | b0761 | 0.83 | +0.8 |
793,735 | + | modE | b0761 | 0.83 | +1.0 |
793,837 | + | +2.1 | |||
793,847 | - | +0.4 | |||
793,864 | + | -1.3 | |||
793,864 | + | +2.1 | |||
793,872 | - | +2.3 | |||
793,872 | - | +2.5 | |||
793,942 | + | -0.0 | |||
793,942 | + | +1.0 | |||
794,427 | + | modA | b0763 | 0.15 | +1.9 |
794,450 | - | modA | b0763 | 0.18 | +3.4 |
794,521 | - | modA | b0763 | 0.27 | -1.0 |
794,527 | + | modA | b0763 | 0.28 | +1.0 |
794,606 | + | modA | b0763 | 0.38 | +1.4 |
794,606 | + | modA | b0763 | 0.38 | +2.2 |
794,628 | + | modA | b0763 | 0.41 | +1.0 |
794,800 | + | modA | b0763 | 0.63 | +2.8 |
794,876 | + | modA | b0763 | 0.73 | +2.1 |
794,989 | - | modA | b0763 | 0.87 | +1.4 |
795,088 | + | -0.3 | |||
795,113 | - | +1.8 |
Or see this region's nucleotide sequence