Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_0139

Experiment: m.b. Lomefloxacin 0.0125 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Lomefloxacin 0.0125 mM
138,050	+		Echvi_0138	0.34	-0.4
138,051	-		Echvi_0138	0.35	+0.5
138,092	+		Echvi_0138	0.38	+0.3
138,092	+		Echvi_0138	0.38	-0.1
138,093	-		Echvi_0138	0.38	-1.1
138,093	-		Echvi_0138	0.38	-1.7
138,093	-		Echvi_0138	0.38	+0.0
138,093	-		Echvi_0138	0.38	+0.0
138,093	-		Echvi_0138	0.38	-1.3
138,191	+		Echvi_0138	0.45	-1.4
138,210	-		Echvi_0138	0.47	-0.4
138,221	+		Echvi_0138	0.47	-0.1
138,222	-		Echvi_0138	0.48	-1.4
138,241	+		Echvi_0138	0.49	-1.7
138,241	+		Echvi_0138	0.49	-0.4
138,241	+		Echvi_0138	0.49	-1.2
138,241	+		Echvi_0138	0.49	-2.7
138,242	-		Echvi_0138	0.49	-0.3
138,242	-		Echvi_0138	0.49	-0.4
138,245	+		Echvi_0138	0.49	+0.2
138,252	-		Echvi_0138	0.50	-1.1
138,263	+		Echvi_0138	0.51	-0.4
138,264	-		Echvi_0138	0.51	-2.2
138,273	-		Echvi_0138	0.51	-0.7
138,275	+		Echvi_0138	0.52	-0.6
138,276	-		Echvi_0138	0.52	-1.1
138,276	-		Echvi_0138	0.52	+1.6
138,276	-		Echvi_0138	0.52	-1.1
138,276	-		Echvi_0138	0.52	-0.3
138,288	-		Echvi_0138	0.53	-1.2
138,290	+		Echvi_0138	0.53	-1.9
138,290	+		Echvi_0138	0.53	-0.8
138,291	-		Echvi_0138	0.53	+0.2
138,302	-		Echvi_0138	0.54	-1.3
138,309	+		Echvi_0138	0.54	-0.9
138,309	+		Echvi_0138	0.54	+0.8
138,310	-		Echvi_0138	0.54	-1.9
138,310	-		Echvi_0138	0.54	-3.0
138,320	+		Echvi_0138	0.55	-1.3
138,320	+		Echvi_0138	0.55	-1.4
138,320	+		Echvi_0138	0.55	-0.6
138,321	-		Echvi_0138	0.55	-1.2
138,321	-		Echvi_0138	0.55	-1.0
138,439	+		Echvi_0138	0.64	-0.5
138,440	-		Echvi_0138	0.64	-0.3
138,440	-		Echvi_0138	0.64	-1.5
138,450	+		Echvi_0138	0.65	-0.8
138,488	-		Echvi_0138	0.68	-2.0
138,506	+		Echvi_0138	0.69	-1.8
138,507	-		Echvi_0138	0.69	+0.4
138,508	+		Echvi_0138	0.69	-2.1
138,508	+		Echvi_0138	0.69	-0.9
138,509	-		Echvi_0138	0.69	-1.4
138,509	-		Echvi_0138	0.69	-1.0
138,559	+		Echvi_0138	0.73	+2.6
138,559	+		Echvi_0138	0.73	-0.8
138,584	-		Echvi_0138	0.75	+0.1
138,584	-		Echvi_0138	0.75	-2.2
138,647	-		Echvi_0138	0.80	-0.2
138,667	+		Echvi_0138	0.81	-1.8
138,667	+		Echvi_0138	0.81	-1.6
138,687	-		Echvi_0138	0.83	+0.0
138,688	+		Echvi_0138	0.83	+0.2
138,689	-		Echvi_0138	0.83	-1.0
138,691	+		Echvi_0138	0.83	+0.6
138,691	+		Echvi_0138	0.83	+0.6
138,692	-		Echvi_0138	0.83	+0.2
138,719	+		Echvi_0138	0.85	+0.5
138,719	+		Echvi_0138	0.85	-0.4
138,719	+		Echvi_0138	0.85	-1.2
138,719	+		Echvi_0138	0.85	-0.4
138,720	-		Echvi_0138	0.85	-0.6
138,720	-		Echvi_0138	0.85	+0.6
138,751	+		Echvi_0138	0.88	-0.4
138,759	-		Echvi_0138	0.88	-0.6
138,759	-		Echvi_0138	0.88	-0.4
138,764	-		Echvi_0138	0.89	-0.8
138,772	+		Echvi_0138	0.89	+0.8
138,790	+				-1.4
138,790	+				-0.1
138,791	-				-0.6
138,794	+				+0.4
138,794	+				-1.9
138,794	+				-1.4
138,795	-				+0.2
138,795	-				-0.4
138,795	-				+0.2
138,795	-				-1.8
138,796	+				+0.3
138,796	+				-0.2
138,796	+				-1.5
138,796	+				-0.2
138,797	-				-0.5
138,797	-				+0.8
138,797	-				-0.5
138,797	-				-0.3
138,797	-				-1.3
138,830	+				-0.5
138,831	-				-0.4
138,833	-				-2.1
138,833	-				-1.0
138,951	+				+0.3
138,963	+				+0.4
138,964	-				-0.1
138,966	+				-0.5
138,986	-				+1.9
138,994	-				-1.2
139,009	+				+1.0
139,034	-				-0.5
139,068	+				-1.1
139,095	+				-2.0
139,124	+				-0.4
139,124	+				-0.1
139,133	+				+1.2
139,271	+		Echvi_0139	0.15	-0.5
139,271	+		Echvi_0139	0.15	-1.2
139,288	+		Echvi_0139	0.16	+0.6
139,301	-		Echvi_0139	0.17	+0.1
139,325	-		Echvi_0139	0.19	-0.8
139,325	-		Echvi_0139	0.19	+0.4
139,463	+		Echvi_0139	0.28	-1.7
139,464	-		Echvi_0139	0.28	-0.7
139,484	-		Echvi_0139	0.29	+0.2
139,484	-		Echvi_0139	0.29	-0.7
139,491	+		Echvi_0139	0.30	-1.7
139,499	+		Echvi_0139	0.30	-1.7
139,499	+		Echvi_0139	0.30	-0.2
139,502	+		Echvi_0139	0.31	-0.2
139,516	+		Echvi_0139	0.32	-1.0
139,517	-		Echvi_0139	0.32	+0.6
139,517	-		Echvi_0139	0.32	-0.5
139,519	+		Echvi_0139	0.32	-1.8
139,519	+		Echvi_0139	0.32	-0.7
139,519	+		Echvi_0139	0.32	-1.0
139,520	-		Echvi_0139	0.32	-1.2
139,523	+		Echvi_0139	0.32	-1.6
139,563	+		Echvi_0139	0.35	-0.7
139,564	-		Echvi_0139	0.35	+0.2
139,619	+		Echvi_0139	0.39	+0.0
139,619	+		Echvi_0139	0.39	-0.1
139,619	+		Echvi_0139	0.39	+0.6
139,620	-		Echvi_0139	0.39	-0.6
139,736	+		Echvi_0139	0.47	-1.8
139,736	+		Echvi_0139	0.47	-0.8
139,737	-		Echvi_0139	0.47	-0.8
139,774	-		Echvi_0139	0.49	-0.3
139,774	-		Echvi_0139	0.49	-0.8
139,804	-		Echvi_0139	0.51	-0.6
139,804	-		Echvi_0139	0.51	-0.5
139,805	+		Echvi_0139	0.51	-1.4
139,805	+		Echvi_0139	0.51	+0.2
139,806	-		Echvi_0139	0.51	+0.2
139,806	-		Echvi_0139	0.51	+0.2
139,806	-		Echvi_0139	0.51	-0.4
139,806	-		Echvi_0139	0.51	-0.6
139,807	+		Echvi_0139	0.51	-1.1
139,807	+		Echvi_0139	0.51	-0.3
139,807	+		Echvi_0139	0.51	-1.3
139,808	-		Echvi_0139	0.51	-0.4
139,808	-		Echvi_0139	0.51	+1.0
139,808	-		Echvi_0139	0.51	-1.5
139,808	-		Echvi_0139	0.51	-0.9
139,848	-		Echvi_0139	0.54	-1.6
139,872	-		Echvi_0139	0.56	-2.8
139,902	+		Echvi_0139	0.58	-0.1
139,911	+		Echvi_0139	0.58	+0.1
139,913	+		Echvi_0139	0.59	-1.0
139,913	+		Echvi_0139	0.59	-0.5
139,913	+		Echvi_0139	0.59	-0.2
139,913	+		Echvi_0139	0.59	-1.1
139,913	+		Echvi_0139	0.59	-2.2
139,914	-		Echvi_0139	0.59	+0.0
139,914	-		Echvi_0139	0.59	-0.9
139,914	-		Echvi_0139	0.59	-0.3
139,914	-		Echvi_0139	0.59	-0.5
139,951	+		Echvi_0139	0.61	-1.2
139,951	+		Echvi_0139	0.61	-0.5
139,986	-		Echvi_0139	0.63	+0.0
139,996	+		Echvi_0139	0.64	-0.0
140,000	+		Echvi_0139	0.64	-0.2
140,059	+		Echvi_0139	0.68	+1.0
140,060	-		Echvi_0139	0.68	-1.0
140,063	+		Echvi_0139	0.69	+0.0
140,063	+		Echvi_0139	0.69	-0.9
140,064	-		Echvi_0139	0.69	+0.0
140,064	-		Echvi_0139	0.69	-1.2
140,076	+		Echvi_0139	0.70	-1.0
140,154	+		Echvi_0139	0.75	-0.1
140,155	-		Echvi_0139	0.75	+0.4
140,159	+		Echvi_0139	0.75	-1.4
140,285	-		Echvi_0139	0.84	-0.1
140,296	-		Echvi_0139	0.84	-1.0
140,306	-		Echvi_0139	0.85	-1.3
140,329	+		Echvi_0139	0.87	-2.7
140,330	-		Echvi_0139	0.87	-0.3
140,389	-				-0.6
140,392	+				+0.6
140,392	+				+0.3
140,395	+				+0.4
140,395	+				+0.6
140,395	+				+0.7
140,396	-				-0.2
140,396	-				-1.4
140,396	-				-0.0
140,396	-				-0.8
140,396	-				+0.1
140,396	-				-0.7
140,396	-				-1.3
140,399	+				+0.3
140,400	-				-1.5
140,434	+				-1.2
140,438	+				-0.5
140,439	-				-1.1
140,441	+				-0.4
140,441	+				-1.0
140,441	+				+0.5
140,470	+				-0.0
140,474	-				-0.6
140,503	-				-2.2
140,515	+				-0.5
140,565	-				-1.5
141,075	-				+0.1
141,131	+				-1.1
141,131	+				+0.4
141,132	-				-0.7
141,172	+		Echvi_0141	0.12	-0.5
141,186	+		Echvi_0141	0.13	+0.8
141,186	+		Echvi_0141	0.13	-1.4
141,186	+		Echvi_0141	0.13	-1.4
141,187	-		Echvi_0141	0.13	-0.6
141,190	-		Echvi_0141	0.13	-0.4
141,190	-		Echvi_0141	0.13	-0.0
141,251	-		Echvi_0141	0.19	+0.6
141,253	+		Echvi_0141	0.19	-0.8
141,331	+		Echvi_0141	0.26	+0.4
141,331	+		Echvi_0141	0.26	+1.6
141,331	+		Echvi_0141	0.26	+0.3
141,332	-		Echvi_0141	0.26	-0.9
141,332	-		Echvi_0141	0.26	-0.7
141,332	-		Echvi_0141	0.26	-0.0
141,480	+		Echvi_0141	0.40	+1.0
141,520	+		Echvi_0141	0.44	-0.3
141,520	+		Echvi_0141	0.44	+0.2
141,522	+		Echvi_0141	0.44	-1.1
141,522	+		Echvi_0141	0.44	-0.5
141,523	-		Echvi_0141	0.44	+0.0