Strain Fitness in Magnetospirillum magneticum AMB-1 around AMB_RS16195

Experiment: 150_an_nonmag_1

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntAMB_RS16190 and AMB_RS16195 overlap by 29 nucleotidesAMB_RS16195 and AMB_RS16200 are separated by 42 nucleotides AMB_RS16190: AMB_RS16190 - dihydropteroate synthase, at 3,471,654 to 3,472,825 _RS16190 AMB_RS16195: AMB_RS16195 - cell division protein FtsH, at 3,472,797 to 3,474,715 _RS16195 AMB_RS16200: AMB_RS16200 - tRNA lysidine(34) synthetase TilS, at 3,474,758 to 3,476,089 _RS16200 Position (kb) 3472 3473 3474 3475Strain fitness (log2 ratio) -1 0 1at 3472.826 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction 150_an_nonmag_1
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3,472,826 - -1.1

Or see this region's nucleotide sequence