Experiment: L-Lactate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_15335 and PS417_15340 are separated by 52 nucleotides PS417_15340 and PS417_15345 are separated by 106 nucleotides PS417_15345 and PS417_15350 are separated by 106 nucleotides
PS417_15335: PS417_15335 - hypothetical protein, at 3,365,782 to 3,366,297
_15335
PS417_15340: PS417_15340 - oxidoreductase, at 3,366,350 to 3,367,171
_15340
PS417_15345: PS417_15345 - hypothetical protein, at 3,367,278 to 3,367,772
_15345
PS417_15350: PS417_15350 - membrane protein, at 3,367,879 to 3,369,081
_15350
Position (kb) 3366
3367
3368 Strain fitness (log2 ratio) -1
0
1
2 at 3365.456 kb on - strand at 3365.467 kb on + strand at 3365.656 kb on - strand at 3365.739 kb on + strand at 3365.752 kb on + strand at 3365.861 kb on + strand, within PS417_15335 at 3365.865 kb on + strand, within PS417_15335 at 3366.106 kb on + strand, within PS417_15335 at 3366.106 kb on + strand, within PS417_15335 at 3366.107 kb on - strand, within PS417_15335 at 3366.111 kb on + strand, within PS417_15335 at 3366.211 kb on + strand, within PS417_15335 at 3366.211 kb on + strand, within PS417_15335 at 3366.657 kb on - strand, within PS417_15340 at 3366.657 kb on - strand, within PS417_15340 at 3366.691 kb on - strand, within PS417_15340 at 3366.691 kb on - strand, within PS417_15340 at 3366.691 kb on - strand, within PS417_15340 at 3366.853 kb on - strand, within PS417_15340 at 3366.956 kb on + strand, within PS417_15340 at 3367.198 kb on + strand at 3367.239 kb on + strand at 3367.239 kb on + strand at 3367.239 kb on + strand at 3367.239 kb on + strand at 3367.239 kb on + strand at 3367.277 kb on - strand at 3367.304 kb on + strand at 3367.331 kb on - strand, within PS417_15345 at 3367.342 kb on + strand, within PS417_15345 at 3367.342 kb on + strand, within PS417_15345 at 3367.343 kb on - strand at 3367.343 kb on - strand, within PS417_15345 at 3367.374 kb on + strand, within PS417_15345 at 3367.586 kb on + strand, within PS417_15345 at 3367.598 kb on + strand, within PS417_15345 at 3367.704 kb on + strand, within PS417_15345 at 3367.705 kb on - strand, within PS417_15345 at 3367.705 kb on - strand, within PS417_15345 at 3367.860 kb on + strand at 3367.860 kb on + strand at 3367.881 kb on - strand at 3368.055 kb on - strand, within PS417_15350 at 3368.102 kb on + strand, within PS417_15350 at 3368.102 kb on + strand at 3368.102 kb on + strand, within PS417_15350 at 3368.102 kb on + strand, within PS417_15350 at 3368.102 kb on + strand, within PS417_15350 at 3368.103 kb on - strand, within PS417_15350 at 3368.103 kb on - strand, within PS417_15350
Per-strain Table
Position Strand Gene LocusTag Fraction L-Lactate (C) remove 3,365,456 - -1.3 3,365,467 + +0.3 3,365,656 - +0.0 3,365,739 + -0.4 3,365,752 + -0.5 3,365,861 + PS417_15335 0.15 -0.7 3,365,865 + PS417_15335 0.16 -0.0 3,366,106 + PS417_15335 0.63 +2.0 3,366,106 + PS417_15335 0.63 -0.4 3,366,107 - PS417_15335 0.63 +0.4 3,366,111 + PS417_15335 0.64 -0.5 3,366,211 + PS417_15335 0.83 -0.8 3,366,211 + PS417_15335 0.83 +0.1 3,366,657 - PS417_15340 0.37 -1.6 3,366,657 - PS417_15340 0.37 -0.1 3,366,691 - PS417_15340 0.41 -0.2 3,366,691 - PS417_15340 0.41 +1.4 3,366,691 - PS417_15340 0.41 +0.0 3,366,853 - PS417_15340 0.61 +0.1 3,366,956 + PS417_15340 0.74 -0.3 3,367,198 + -0.0 3,367,239 + -0.2 3,367,239 + +0.3 3,367,239 + +0.0 3,367,239 + +1.4 3,367,239 + +0.6 3,367,277 - -0.1 3,367,304 + -1.0 3,367,331 - PS417_15345 0.11 -0.1 3,367,342 + PS417_15345 0.13 -0.8 3,367,342 + PS417_15345 0.13 -0.2 3,367,343 - +0.4 3,367,343 - PS417_15345 0.13 -0.2 3,367,374 + PS417_15345 0.19 -0.4 3,367,586 + PS417_15345 0.62 +0.0 3,367,598 + PS417_15345 0.65 -0.4 3,367,704 + PS417_15345 0.86 +0.4 3,367,705 - PS417_15345 0.86 -0.2 3,367,705 - PS417_15345 0.86 -0.4 3,367,860 + -0.4 3,367,860 + +0.2 3,367,881 - -0.5 3,368,055 - PS417_15350 0.15 -0.2 3,368,102 + PS417_15350 0.19 -0.0 3,368,102 + -0.2 3,368,102 + PS417_15350 0.19 -0.4 3,368,102 + PS417_15350 0.19 -0.7 3,368,102 + PS417_15350 0.19 +0.2 3,368,103 - PS417_15350 0.19 +0.0 3,368,103 - PS417_15350 0.19 +2.2
Or see this region's nucleotide sequence