Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_4545

Experiment: m.b. A22 0.04 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. A22 0.04 mg/ml
5,440,461	+				+0.1
5,440,461	+				+0.9
5,440,577	-				-0.1
5,440,628	+				+0.4
5,440,628	+				+0.5
5,440,629	-				+0.4
5,440,637	-				-0.4
5,440,637	-				+0.5
5,440,641	-				-1.4
5,440,690	+				-0.2
5,440,690	+				+1.4
5,440,691	-				+0.6
5,440,792	+				+0.4
5,440,792	+				-0.4
5,440,792	+				-0.2
5,440,793	-				+1.4
5,440,793	-				+1.3
5,440,793	-				-0.5
5,440,793	-				+0.6
5,440,793	-				-0.7
5,440,962	+		Echvi_4544	0.27	+0.9
5,440,963	-		Echvi_4544	0.28	-1.1
5,441,002	+				+4.5
5,441,098	+		Echvi_4544	0.51	+0.1
5,441,099	-		Echvi_4544	0.51	+0.6
5,441,113	-		Echvi_4544	0.54	-0.6
5,441,113	-		Echvi_4544	0.54	-0.2
5,441,113	-		Echvi_4544	0.54	-0.1
5,441,118	+		Echvi_4544	0.55	-0.1
5,441,185	+		Echvi_4544	0.67	+0.7
5,441,186	-		Echvi_4544	0.67	+0.7
5,441,186	-		Echvi_4544	0.67	+0.1
5,441,243	+		Echvi_4544	0.77	+1.2
5,441,243	+		Echvi_4544	0.77	+0.5
5,441,244	-		Echvi_4544	0.77	-0.3
5,441,244	-		Echvi_4544	0.77	-0.1
5,441,309	+		Echvi_4544	0.89	-1.1
5,441,310	-		Echvi_4544	0.89	-0.4
5,441,310	-		Echvi_4544	0.89	-0.5
5,441,363	+				+1.4
5,441,364	-				+0.3
5,441,364	-				-2.1
5,441,388	-				-0.3
5,441,409	+				+0.8
5,441,416	+				+0.6
5,441,416	+				+0.6
5,441,417	-				+0.4
5,441,418	+				-0.4
5,441,418	+				-0.3
5,441,418	+				+0.2
5,441,441	+				+0.0
5,441,485	+		Echvi_4545	0.22	-1.5
5,441,486	-		Echvi_4545	0.22	+1.5
5,441,535	+		Echvi_4545	0.39	+0.9
5,441,535	+		Echvi_4545	0.39	-0.4
5,441,535	+		Echvi_4545	0.39	-0.4
5,441,536	-		Echvi_4545	0.40	+1.9
5,441,536	-		Echvi_4545	0.40	+1.1
5,441,536	-		Echvi_4545	0.40	+2.2
5,441,536	-		Echvi_4545	0.40	+0.4
5,441,542	+		Echvi_4545	0.42	-0.3
5,441,543	-		Echvi_4545	0.42	+0.0
5,441,544	+		Echvi_4545	0.43	+0.8
5,441,545	-		Echvi_4545	0.43	+1.9
5,441,629	+		Echvi_4545	0.73	+0.7
5,441,629	+		Echvi_4545	0.73	+0.1
5,441,630	-		Echvi_4545	0.73	+0.9
5,441,683	+				+0.9
5,441,684	-				-0.5
5,441,693	+				-0.4
5,441,694	-				+0.2
5,441,719	+				+2.9
5,441,719	+				-0.1
5,441,719	+				+0.1
5,441,720	-				+0.4
5,441,721	+				-0.1
5,441,805	+				-0.4
5,441,843	+				-0.5
5,441,848	+				-0.1
5,441,852	-				+1.1
5,441,897	-				+0.5
5,441,919	+				-1.1
5,441,920	-				-0.8
5,441,927	-				+0.6
5,441,931	+				-1.1
5,441,931	+				+0.7
5,441,931	+				+0.2
5,441,931	+				+0.8
5,441,932	-				-0.2
5,441,932	-				-1.1
5,441,933	+				+0.2
5,441,934	-				+0.3
5,441,934	-				-1.0
5,441,969	-				+0.4
5,442,003	-		Echvi_4546	0.10	-1.1
5,442,153	-		Echvi_4546	0.27	+0.5
5,442,153	-		Echvi_4546	0.27	-0.5
5,442,167	+		Echvi_4546	0.28	-0.8
5,442,265	+		Echvi_4546	0.39	-0.2
5,442,320	+		Echvi_4546	0.45	-0.1
5,442,394	-		Echvi_4546	0.53	+0.4
5,442,396	+		Echvi_4546	0.54	-0.1
5,442,424	+		Echvi_4546	0.57	-1.5
5,442,502	-		Echvi_4546	0.65	-0.1
5,442,686	+		Echvi_4546	0.86	-0.4
5,442,687	-		Echvi_4546	0.86	+0.4
5,442,699	+		Echvi_4546	0.87	-0.4
5,442,700	-		Echvi_4546	0.87	+0.1