Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_3173

Experiment: m.b. A22 0.04 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. A22 0.04 mg/ml
3,778,582	-		Echvi_3171	0.79	+1.1
3,778,616	-		Echvi_3171	0.82	+0.3
3,778,621	+		Echvi_3171	0.82	+0.8
3,778,622	-		Echvi_3171	0.83	-1.3
3,778,622	-		Echvi_3171	0.83	-0.2
3,778,622	-		Echvi_3171	0.83	+1.3
3,778,661	-		Echvi_3171	0.86	-0.8
3,778,661	-		Echvi_3171	0.86	-1.4
3,778,661	-		Echvi_3171	0.86	+1.1
3,778,755	-				-0.1
3,778,789	-				-0.7
3,778,843	+				+0.1
3,778,966	-				+0.2
3,778,968	-				-0.7
3,778,968	-				-0.7
3,778,968	-				+0.6
3,778,972	+				-0.7
3,778,973	-				+0.4
3,778,973	-				+0.8
3,778,979	-				+0.0
3,779,020	-				-0.4
3,779,021	+				+1.8
3,779,022	-				-0.2
3,779,027	-				-2.5
3,779,035	-				+0.4
3,779,035	-				+1.6
3,779,035	-				+0.1
3,779,072	+				-3.0
3,779,076	+				-2.0
3,779,076	+				+0.3
3,779,077	-				-0.2
3,779,232	-		Echvi_3172	0.23	+0.3
3,779,240	-		Echvi_3172	0.26	+0.4
3,779,312	-		Echvi_3172	0.54	-0.5
3,779,352	+		Echvi_3172	0.69	+0.7
3,779,353	-		Echvi_3172	0.70	-0.3
3,779,388	-		Echvi_3172	0.83	-0.4
3,779,391	+		Echvi_3172	0.84	+0.0
3,779,421	+				-0.1
3,779,443	+				+0.8
3,779,477	+				+0.2
3,779,498	+				+1.0
3,779,532	+				-0.1
3,779,533	-				-0.3
3,779,533	-				+0.3
3,779,542	+				-0.2
3,779,542	+				-0.2
3,779,543	-				-0.2
3,779,543	-				+0.2
3,779,677	-		Echvi_3173	0.23	-1.4
3,779,679	+		Echvi_3173	0.23	-0.3
3,779,679	+		Echvi_3173	0.23	-0.3
3,779,680	-		Echvi_3173	0.23	+0.5
3,779,680	-		Echvi_3173	0.23	-1.0
3,779,682	-		Echvi_3173	0.24	-0.0
3,779,712	-		Echvi_3173	0.30	+1.0
3,779,742	+		Echvi_3173	0.37	+0.3
3,779,778	+		Echvi_3173	0.45	+1.4
3,779,879	+		Echvi_3173	0.68	+0.3
3,779,879	+		Echvi_3173	0.68	+0.9
3,779,879	+		Echvi_3173	0.68	+1.6
3,779,880	-		Echvi_3173	0.68	-0.9
3,779,880	-		Echvi_3173	0.68	+2.7
3,779,974	+		Echvi_3173	0.89	-0.2
3,779,975	-		Echvi_3173	0.89	+0.8
3,779,975	-		Echvi_3173	0.89	+0.3
3,779,980	+				+0.8
3,780,026	-				-0.2
3,780,026	-				+0.1
3,780,049	+				-0.5
3,780,056	-				-0.2
3,780,127	+		Echvi_3174	0.17	+0.6
3,780,127	+		Echvi_3174	0.17	-0.5
3,780,128	-		Echvi_3174	0.17	+0.2
3,780,146	+		Echvi_3174	0.20	+0.2
3,780,146	+		Echvi_3174	0.20	-0.1
3,780,146	+		Echvi_3174	0.20	-0.6
3,780,147	-		Echvi_3174	0.20	-2.3
3,780,199	+		Echvi_3174	0.29	-0.1
3,780,199	+		Echvi_3174	0.29	+0.2
3,780,199	+		Echvi_3174	0.29	+1.5
3,780,199	+		Echvi_3174	0.29	-0.2
3,780,200	-		Echvi_3174	0.30	-1.2
3,780,200	-		Echvi_3174	0.30	-1.2
3,780,200	-		Echvi_3174	0.30	-0.1
3,780,202	+		Echvi_3174	0.30	-1.0
3,780,323	+		Echvi_3174	0.52	+1.0
3,780,370	-		Echvi_3174	0.60	+1.2
3,780,370	-		Echvi_3174	0.60	+0.7
3,780,370	-		Echvi_3174	0.60	+0.2
3,780,371	+		Echvi_3174	0.60	+0.3
3,780,371	+		Echvi_3174	0.60	+0.5
3,780,392	+		Echvi_3174	0.64	+0.0
3,780,413	+		Echvi_3174	0.68	-1.2
3,780,433	+		Echvi_3174	0.71	-0.0
3,780,433	+		Echvi_3174	0.71	+0.2
3,780,434	-		Echvi_3174	0.71	-0.2
3,780,456	-		Echvi_3174	0.75	+0.6
3,780,485	-		Echvi_3174	0.80	+0.6
3,780,487	+		Echvi_3174	0.81	+0.6
3,780,500	-		Echvi_3174	0.83	+0.4
3,780,578	+				-1.5
3,780,578	+				+1.2
3,780,579	-				-0.4
3,780,579	-				+0.5
3,780,579	-				+0.6
3,780,585	-				-0.0
3,780,585	-				+1.1
3,780,747	-		Echvi_3175	0.15	+0.4
3,780,766	-		Echvi_3175	0.17	+0.6
3,780,766	-		Echvi_3175	0.17	-0.4
3,780,810	-		Echvi_3175	0.22	+0.7
3,780,811	+		Echvi_3175	0.22	+1.3
3,780,811	+		Echvi_3175	0.22	+1.5
3,780,811	+		Echvi_3175	0.22	-0.1
3,780,811	+		Echvi_3175	0.22	-1.1
3,780,812	-				+1.2
3,780,816	-		Echvi_3175	0.22	+0.2
3,780,816	-		Echvi_3175	0.22	+0.7
3,780,826	-		Echvi_3175	0.24	+0.3
3,780,852	-		Echvi_3175	0.26	-0.5
3,780,852	-		Echvi_3175	0.26	+2.2
3,780,876	+		Echvi_3175	0.29	-0.6
3,780,876	+		Echvi_3175	0.29	+0.8
3,780,940	+		Echvi_3175	0.36	-0.1
3,780,940	+				+2.8
3,780,940	+		Echvi_3175	0.36	-0.9
3,780,943	+		Echvi_3175	0.37	-2.5
3,780,943	+		Echvi_3175	0.37	+0.0
3,780,943	+		Echvi_3175	0.37	+1.8
3,780,944	-		Echvi_3175	0.37	+0.1
3,780,944	-		Echvi_3175	0.37	+0.1
3,780,944	-		Echvi_3175	0.37	+0.1
3,780,946	+		Echvi_3175	0.37	-0.5
3,780,947	-		Echvi_3175	0.37	+0.2
3,780,956	+		Echvi_3175	0.38	+1.8
3,780,964	+		Echvi_3175	0.39	+1.0
3,780,964	+		Echvi_3175	0.39	+0.1
3,780,965	-		Echvi_3175	0.39	-1.0